EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004610 (Gene tree)
Gene ID: 103388385
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2013 bases
Position: chr13:8348589-8350601
Accession: 103388385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007133	RRM_1	PF00076.22	2.8e-34	1	3
ENSCSEP00000007133	RRM_1	PF00076.22	2.8e-34	2	3
ENSCSEP00000007133	RRM_1	PF00076.22	2.8e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007210	-	2013	XM_008323338	ENSCSEP00000007133	670 (aa)	XP_008321560	-

Gene Model

Click here to download ENSCSEG00000004610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004610	rbm12b	69	30.541	ENSCSEG00000001575	-	99	30.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004610	rbm12b	89	39.563	ENSG00000183808	RBM12B	98	72.500	Homo_sapiens
ENSCSEG00000004610	rbm12b	97	58.725	ENSAPOG00000013963	rbm12b	100	58.725	Acanthochromis_polyacanthus
ENSCSEG00000004610	rbm12b	67	30.472	ENSAPOG00000008836	zgc:153215	95	30.472	Acanthochromis_polyacanthus
ENSCSEG00000004610	rbm12b	97	40.000	ENSAMEG00000007134	RBM12B	83	40.000	Ailuropoda_melanoleuca
ENSCSEG00000004610	rbm12b	91	63.455	ENSACIG00000014943	rbm12b	97	63.455	Amphilophus_citrinellus
ENSCSEG00000004610	rbm12b	97	59.513	ENSAOCG00000024270	rbm12b	100	59.513	Amphiprion_ocellaris
ENSCSEG00000004610	rbm12b	69	30.382	ENSAOCG00000010819	zgc:153215	98	30.382	Amphiprion_ocellaris
ENSCSEG00000004610	rbm12b	96	40.204	ENSAPEG00000022079	rbm12b	99	60.784	Amphiprion_percula
ENSCSEG00000004610	rbm12b	99	59.851	ENSATEG00000004578	rbm12b	99	59.851	Anabas_testudineus
ENSCSEG00000004610	rbm12b	70	51.250	ENSATEG00000001886	zgc:153215	81	43.750	Anabas_testudineus
ENSCSEG00000004610	rbm12b	97	39.496	ENSAPLG00000002020	RBM12B	100	40.282	Anas_platyrhynchos
ENSCSEG00000004610	rbm12b	81	45.455	ENSACAG00000003463	RBM12B	57	45.455	Anolis_carolinensis
ENSCSEG00000004610	rbm12b	89	39.920	ENSANAG00000034015	RBM12B	74	39.920	Aotus_nancymaae
ENSCSEG00000004610	rbm12b	99	60.000	ENSACLG00000005575	rbm12b	99	60.000	Astatotilapia_calliptera
ENSCSEG00000004610	rbm12b	97	47.458	ENSACLG00000005578	rbm12b	100	47.458	Astatotilapia_calliptera
ENSCSEG00000004610	rbm12b	97	47.424	ENSAMXG00000041973	rbm12b	100	47.885	Astyanax_mexicanus
ENSCSEG00000004610	rbm12b	71	54.762	ENSAMXG00000020853	zgc:153215	78	46.552	Astyanax_mexicanus
ENSCSEG00000004610	rbm12b	83	46.753	ENSBTAG00000013408	RBM12B	65	46.753	Bos_taurus
ENSCSEG00000004610	rbm12b	81	45.455	ENSCAFG00000009109	RBM12B	60	45.455	Canis_familiaris
ENSCSEG00000004610	rbm12b	81	45.455	ENSCAFG00020012203	RBM12B	68	45.455	Canis_lupus_dingo
ENSCSEG00000004610	rbm12b	71	41.118	ENSCHIG00000006790	RBM12B	67	41.118	Capra_hircus
ENSCSEG00000004610	rbm12b	95	38.545	ENSTSYG00000012515	RBM12B	67	38.545	Carlito_syrichta
ENSCSEG00000004610	rbm12b	82	48.052	ENSCAPG00000003543	RBM12B	59	48.052	Cavia_aperea
ENSCSEG00000004610	rbm12b	82	48.052	ENSCPOG00000007815	RBM12B	59	48.052	Cavia_porcellus
ENSCSEG00000004610	rbm12b	89	39.604	ENSCATG00000030769	RBM12B	72	39.604	Cercocebus_atys
ENSCSEG00000004610	rbm12b	81	48.052	ENSCLAG00000017617	RBM12B	59	48.052	Chinchilla_lanigera
ENSCSEG00000004610	rbm12b	81	46.753	ENSCSAG00000018559	RBM12B	56	46.753	Chlorocebus_sabaeus
ENSCSEG00000004610	rbm12b	79	44.444	ENSCHOG00000008934	RBM12B	58	44.444	Choloepus_hoffmanni
ENSCSEG00000004610	rbm12b	97	39.470	ENSCPBG00000003061	RBM12B	100	39.470	Chrysemys_picta_bellii
ENSCSEG00000004610	rbm12b	89	39.563	ENSCANG00000030379	RBM12B	75	39.563	Colobus_angolensis_palliatus
ENSCSEG00000004610	rbm12b	82	49.351	ENSCGRG00001008710	-	66	49.351	Cricetulus_griseus_chok1gshd
ENSCSEG00000004610	rbm12b	97	52.879	ENSCVAG00000011047	rbm12b	100	52.879	Cyprinodon_variegatus
ENSCSEG00000004610	rbm12b	69	40.553	ENSCVAG00000009259	-	99	40.553	Cyprinodon_variegatus
ENSCSEG00000004610	rbm12b	97	42.143	ENSDARG00000079717	rbm12b	99	42.817	Danio_rerio
ENSCSEG00000004610	rbm12b	97	37.653	ENSDNOG00000041608	RBM12B	69	37.653	Dasypus_novemcinctus
ENSCSEG00000004610	rbm12b	88	40.458	ENSDORG00000024034	-	66	40.458	Dipodomys_ordii
ENSCSEG00000004610	rbm12b	74	40.987	ENSETEG00000013005	-	69	40.987	Echinops_telfairi
ENSCSEG00000004610	rbm12b	65	30.159	ENSEBUG00000009015	-	100	30.159	Eptatretus_burgeri
ENSCSEG00000004610	rbm12b	95	39.259	ENSEASG00005016297	RBM12B	76	39.259	Equus_asinus_asinus
ENSCSEG00000004610	rbm12b	89	40.040	ENSECAG00000017870	RBM12B	66	40.040	Equus_caballus
ENSCSEG00000004610	rbm12b	87	48.052	ENSFCAG00000029274	RBM12B	70	48.052	Felis_catus
ENSCSEG00000004610	rbm12b	97	38.036	ENSFALG00000014893	RBM12B	100	38.687	Ficedula_albicollis
ENSCSEG00000004610	rbm12b	94	39.839	ENSFDAG00000005576	RBM12B	66	39.839	Fukomys_damarensis
ENSCSEG00000004610	rbm12b	68	30.482	ENSFHEG00000014539	zgc:153215	95	30.482	Fundulus_heteroclitus
ENSCSEG00000004610	rbm12b	97	55.488	ENSFHEG00000016425	rbm12b	100	55.488	Fundulus_heteroclitus
ENSCSEG00000004610	rbm12b	97	51.450	ENSGMOG00000013467	rbm12b	100	51.450	Gadus_morhua
ENSCSEG00000004610	rbm12b	97	39.691	ENSGALG00000035129	RBM12B	100	39.326	Gallus_gallus
ENSCSEG00000004610	rbm12b	97	56.732	ENSGAFG00000007224	rbm12b	100	56.949	Gambusia_affinis
ENSCSEG00000004610	rbm12b	68	30.000	ENSGAFG00000007845	zgc:153215	98	30.000	Gambusia_affinis
ENSCSEG00000004610	rbm12b	97	57.815	ENSGACG00000008682	rbm12b	99	57.815	Gasterosteus_aculeatus
ENSCSEG00000004610	rbm12b	97	39.522	ENSGAGG00000009774	RBM12B	100	39.522	Gopherus_agassizii
ENSCSEG00000004610	rbm12b	89	39.761	ENSGGOG00000011909	RBM12B	71	39.761	Gorilla_gorilla
ENSCSEG00000004610	rbm12b	97	59.970	ENSHBUG00000016227	rbm12b	100	59.970	Haplochromis_burtoni
ENSCSEG00000004610	rbm12b	62	45.455	ENSHBUG00000016150	zgc:153215	78	45.455	Haplochromis_burtoni
ENSCSEG00000004610	rbm12b	94	39.802	ENSHGLG00000009063	RBM12B	66	39.802	Heterocephalus_glaber_female
ENSCSEG00000004610	rbm12b	94	39.802	ENSHGLG00100021324	RBM12B	66	39.802	Heterocephalus_glaber_male
ENSCSEG00000004610	rbm12b	97	51.220	ENSHCOG00000014952	rbm12b	100	51.220	Hippocampus_comes
ENSCSEG00000004610	rbm12b	99	44.540	ENSIPUG00000001167	RBM12B	98	44.635	Ictalurus_punctatus
ENSCSEG00000004610	rbm12b	69	56.410	ENSIPUG00000019731	zgc:153215	77	56.410	Ictalurus_punctatus
ENSCSEG00000004610	rbm12b	85	48.052	ENSSTOG00000027445	RBM12B	70	48.052	Ictidomys_tridecemlineatus
ENSCSEG00000004610	rbm12b	82	48.052	ENSJJAG00000004165	-	65	48.052	Jaculus_jaculus
ENSCSEG00000004610	rbm12b	97	51.598	ENSKMAG00000013704	rbm12b	97	51.442	Kryptolebias_marmoratus
ENSCSEG00000004610	rbm12b	69	30.515	ENSKMAG00000004958	zgc:153215	99	30.515	Kryptolebias_marmoratus
ENSCSEG00000004610	rbm12b	97	51.534	ENSKMAG00000013715	rbm12b	99	51.534	Kryptolebias_marmoratus
ENSCSEG00000004610	rbm12b	69	30.815	ENSLBEG00000002597	zgc:153215	99	31.349	Labrus_bergylta
ENSCSEG00000004610	rbm12b	97	40.056	ENSLACG00000007177	RBM12B	100	40.476	Latimeria_chalumnae
ENSCSEG00000004610	rbm12b	97	45.507	ENSLOCG00000018344	rbm12b	100	45.507	Lepisosteus_oculatus
ENSCSEG00000004610	rbm12b	84	42.857	ENSLAFG00000029949	RBM12B	70	42.857	Loxodonta_africana
ENSCSEG00000004610	rbm12b	89	39.604	ENSMFAG00000045430	RBM12B	72	39.604	Macaca_fascicularis
ENSCSEG00000004610	rbm12b	89	39.604	ENSMMUG00000005558	RBM12B	70	39.604	Macaca_mulatta
ENSCSEG00000004610	rbm12b	89	39.604	ENSMNEG00000041292	RBM12B	72	39.604	Macaca_nemestrina
ENSCSEG00000004610	rbm12b	89	39.802	ENSMLEG00000037288	RBM12B	70	39.802	Mandrillus_leucophaeus
ENSCSEG00000004610	rbm12b	97	62.290	ENSMAMG00000011998	rbm12b	100	62.652	Mastacembelus_armatus
ENSCSEG00000004610	rbm12b	69	48.544	ENSMAMG00000012038	zgc:153215	81	48.544	Mastacembelus_armatus
ENSCSEG00000004610	rbm12b	62	45.455	ENSMZEG00005005435	zgc:153215	78	45.455	Maylandia_zebra
ENSCSEG00000004610	rbm12b	97	57.078	ENSMZEG00005014845	rbm12b	99	57.078	Maylandia_zebra
ENSCSEG00000004610	rbm12b	97	60.152	ENSMZEG00005015005	rbm12b	100	60.152	Maylandia_zebra
ENSCSEG00000004610	rbm12b	71	42.471	ENSMGAG00000011985	RBM12B	99	42.747	Meleagris_gallopavo
ENSCSEG00000004610	rbm12b	81	49.351	ENSMAUG00000021752	-	68	49.351	Mesocricetus_auratus
ENSCSEG00000004610	rbm12b	89	39.567	ENSMICG00000036969	RBM12B	73	39.567	Microcebus_murinus
ENSCSEG00000004610	rbm12b	81	48.052	ENSMOCG00000005603	-	68	48.052	Microtus_ochrogaster
ENSCSEG00000004610	rbm12b	64	42.683	ENSMMOG00000003372	zgc:153215	99	42.683	Mola_mola
ENSCSEG00000004610	rbm12b	97	58.114	ENSMMOG00000002404	rbm12b	94	58.114	Mola_mola
ENSCSEG00000004610	rbm12b	88	45.455	ENSMODG00000007436	RBM12B	82	45.455	Monodelphis_domestica
ENSCSEG00000004610	rbm12b	69	33.058	ENSMALG00000001222	zgc:153215	98	33.058	Monopterus_albus
ENSCSEG00000004610	rbm12b	97	58.522	ENSMALG00000012059	rbm12b	100	58.522	Monopterus_albus
ENSCSEG00000004610	rbm12b	81	50.667	ENSMUSG00000046667	Rbm12b1	70	50.667	Mus_musculus
ENSCSEG00000004610	rbm12b	81	49.333	ENSMUSG00000052137	Rbm12b2	70	49.333	Mus_musculus
ENSCSEG00000004610	rbm12b	84	43.878	MGP_SPRETEiJ_G0026765	-	67	43.878	Mus_spretus
ENSCSEG00000004610	rbm12b	84	41.748	MGP_SPRETEiJ_G0026766	-	74	41.748	Mus_spretus
ENSCSEG00000004610	rbm12b	85	46.753	ENSMPUG00000018637	RBM12B	59	46.753	Mustela_putorius_furo
ENSCSEG00000004610	rbm12b	83	46.753	ENSMLUG00000002359	RBM12B	62	46.753	Myotis_lucifugus
ENSCSEG00000004610	rbm12b	82	45.455	ENSNGAG00000002801	-	61	45.455	Nannospalax_galili
ENSCSEG00000004610	rbm12b	97	60.606	ENSNBRG00000015057	rbm12b	100	60.606	Neolamprologus_brichardi
ENSCSEG00000004610	rbm12b	63	43.750	ENSNBRG00000013644	zgc:153215	78	43.750	Neolamprologus_brichardi
ENSCSEG00000004610	rbm12b	89	39.259	ENSNLEG00000032050	RBM12B	73	39.259	Nomascus_leucogenys
ENSCSEG00000004610	rbm12b	82	48.052	ENSODEG00000019204	RBM12B	60	48.052	Octodon_degus
ENSCSEG00000004610	rbm12b	97	61.364	ENSONIG00000020612	rbm12b	100	61.364	Oreochromis_niloticus
ENSCSEG00000004610	rbm12b	98	38.504	ENSOANG00000015735	-	98	39.662	Ornithorhynchus_anatinus
ENSCSEG00000004610	rbm12b	89	39.347	ENSOCUG00000010353	RBM12B	75	39.347	Oryctolagus_cuniculus
ENSCSEG00000004610	rbm12b	98	55.789	ENSORLG00000008228	rbm12b	98	55.789	Oryzias_latipes
ENSCSEG00000004610	rbm12b	98	56.090	ENSORLG00020013619	rbm12b	98	56.090	Oryzias_latipes_hni
ENSCSEG00000004610	rbm12b	98	56.090	ENSORLG00015019999	rbm12b	98	56.090	Oryzias_latipes_hsok
ENSCSEG00000004610	rbm12b	70	30.064	ENSOMEG00000004220	zgc:153215	97	30.233	Oryzias_melastigma
ENSCSEG00000004610	rbm12b	98	57.078	ENSOMEG00000022523	rbm12b	98	57.078	Oryzias_melastigma
ENSCSEG00000004610	rbm12b	89	39.321	ENSOGAG00000002979	RBM12B	66	39.321	Otolemur_garnettii
ENSCSEG00000004610	rbm12b	87	48.052	ENSPTIG00000020071	RBM12B	70	48.052	Panthera_tigris_altaica
ENSCSEG00000004610	rbm12b	89	39.761	ENSPTRG00000020420	RBM12B	73	39.761	Pan_troglodytes
ENSCSEG00000004610	rbm12b	89	39.604	ENSPANG00000035535	RBM12B	70	39.604	Papio_anubis
ENSCSEG00000004610	rbm12b	98	46.418	ENSPKIG00000018719	rbm12b	99	47.126	Paramormyrops_kingsleyae
ENSCSEG00000004610	rbm12b	69	34.653	ENSPKIG00000014851	zgc:153215	99	34.653	Paramormyrops_kingsleyae
ENSCSEG00000004610	rbm12b	97	40.510	ENSPSIG00000001348	RBM12B	100	40.510	Pelodiscus_sinensis
ENSCSEG00000004610	rbm12b	64	50.799	ENSPMGG00000012348	-	97	50.799	Periophthalmus_magnuspinnatus
ENSCSEG00000004610	rbm12b	81	50.649	ENSPEMG00000008279	-	67	50.649	Peromyscus_maniculatus_bairdii
ENSCSEG00000004610	rbm12b	81	45.455	ENSPCIG00000008556	RBM12B	84	45.455	Phascolarctos_cinereus
ENSCSEG00000004610	rbm12b	99	56.909	ENSPFOG00000020937	rbm12b	98	57.058	Poecilia_formosa
ENSCSEG00000004610	rbm12b	69	43.548	ENSPFOG00000017451	zgc:153215	72	43.548	Poecilia_formosa
ENSCSEG00000004610	rbm12b	97	57.704	ENSPLAG00000018782	rbm12b	100	57.855	Poecilia_latipinna
ENSCSEG00000004610	rbm12b	69	30.498	ENSPLAG00000000232	zgc:153215	99	30.498	Poecilia_latipinna
ENSCSEG00000004610	rbm12b	69	30.290	ENSPMEG00000016662	zgc:153215	99	30.290	Poecilia_mexicana
ENSCSEG00000004610	rbm12b	97	57.035	ENSPMEG00000011418	rbm12b	100	57.553	Poecilia_mexicana
ENSCSEG00000004610	rbm12b	70	30.920	ENSPREG00000018608	zgc:153215	99	30.920	Poecilia_reticulata
ENSCSEG00000004610	rbm12b	97	57.273	ENSPREG00000020770	rbm12b	100	57.791	Poecilia_reticulata
ENSCSEG00000004610	rbm12b	81	46.753	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSCSEG00000004610	rbm12b	89	40.000	ENSPCOG00000023546	RBM12B	71	40.000	Propithecus_coquereli
ENSCSEG00000004610	rbm12b	81	46.753	ENSPVAG00000011803	RBM12B	65	46.753	Pteropus_vampyrus
ENSCSEG00000004610	rbm12b	97	60.455	ENSPNYG00000016696	rbm12b	100	60.455	Pundamilia_nyererei
ENSCSEG00000004610	rbm12b	69	47.059	ENSPNAG00000025628	zgc:153215	78	47.059	Pygocentrus_nattereri
ENSCSEG00000004610	rbm12b	97	44.702	ENSPNAG00000008126	rbm12b	98	45.726	Pygocentrus_nattereri
ENSCSEG00000004610	rbm12b	85	49.333	ENSRNOG00000016330	Rbm12b	69	49.333	Rattus_norvegicus
ENSCSEG00000004610	rbm12b	74	40.535	ENSRNOG00000055292	LOC679087	68	40.535	Rattus_norvegicus
ENSCSEG00000004610	rbm12b	89	39.563	ENSRBIG00000035046	RBM12B	72	39.563	Rhinopithecus_bieti
ENSCSEG00000004610	rbm12b	89	39.604	ENSRROG00000023660	RBM12B	75	39.604	Rhinopithecus_roxellana
ENSCSEG00000004610	rbm12b	81	46.753	ENSSBOG00000027592	RBM12B	67	46.753	Saimiri_boliviensis_boliviensis
ENSCSEG00000004610	rbm12b	81	45.455	ENSSHAG00000015335	RBM12B	84	45.455	Sarcophilus_harrisii
ENSCSEG00000004610	rbm12b	97	48.170	ENSSFOG00015001584	rbm12b	100	48.170	Scleropages_formosus
ENSCSEG00000004610	rbm12b	69	34.930	ENSSFOG00015009427	zgc:153215	99	34.930	Scleropages_formosus
ENSCSEG00000004610	rbm12b	97	66.768	ENSSMAG00000019708	rbm12b	100	66.768	Scophthalmus_maximus
ENSCSEG00000004610	rbm12b	69	31.000	ENSSMAG00000019013	zgc:153215	96	31.000	Scophthalmus_maximus
ENSCSEG00000004610	rbm12b	69	31.663	ENSSDUG00000012545	zgc:153215	98	31.663	Seriola_dumerili
ENSCSEG00000004610	rbm12b	97	62.925	ENSSDUG00000006856	rbm12b	100	63.220	Seriola_dumerili
ENSCSEG00000004610	rbm12b	97	62.925	ENSSLDG00000016156	rbm12b	100	62.925	Seriola_lalandi_dorsalis
ENSCSEG00000004610	rbm12b	69	55.000	ENSSLDG00000013581	zgc:153215	77	50.000	Seriola_lalandi_dorsalis
ENSCSEG00000004610	rbm12b	74	40.189	ENSSARG00000011845	-	71	40.189	Sorex_araneus
ENSCSEG00000004610	rbm12b	70	39.924	ENSSPUG00000016954	RBM12B	91	40.304	Sphenodon_punctatus
ENSCSEG00000004610	rbm12b	69	31.983	ENSSPAG00000023584	zgc:153215	99	32.196	Stegastes_partitus
ENSCSEG00000004610	rbm12b	97	58.574	ENSSPAG00000006774	rbm12b	100	58.574	Stegastes_partitus
ENSCSEG00000004610	rbm12b	82	48.000	ENSSSCG00000006110	RBM12B	57	48.000	Sus_scrofa
ENSCSEG00000004610	rbm12b	70	43.496	ENSTGUG00000011860	RBM12B	96	43.496	Taeniopygia_guttata
ENSCSEG00000004610	rbm12b	97	54.312	ENSTRUG00000013738	rbm12b	100	54.697	Takifugu_rubripes
ENSCSEG00000004610	rbm12b	79	37.871	ENSTBEG00000000449	RBM12B	71	37.871	Tupaia_belangeri
ENSCSEG00000004610	rbm12b	89	40.396	ENSUAMG00000023639	RBM12B	72	40.396	Ursus_americanus
ENSCSEG00000004610	rbm12b	89	40.079	ENSUMAG00000016008	RBM12B	67	40.079	Ursus_maritimus
ENSCSEG00000004610	rbm12b	81	45.455	ENSVVUG00000002694	RBM12B	68	45.455	Vulpes_vulpes
ENSCSEG00000004610	rbm12b	97	32.070	ENSXETG00000014696	rbm12b	99	31.831	Xenopus_tropicalis
ENSCSEG00000004610	rbm12b	97	35.868	ENSXETG00000014694	rbm12b	100	39.583	Xenopus_tropicalis
ENSCSEG00000004610	rbm12b	70	30.588	ENSXCOG00000019654	zgc:153215	98	30.588	Xiphophorus_couchianus
ENSCSEG00000004610	rbm12b	97	57.943	ENSXMAG00000014213	rbm12b	100	57.943	Xiphophorus_maculatus
ENSCSEG00000004610	rbm12b	56	39.506	ENSXMAG00000013169	-	93	39.506	Xiphophorus_maculatus