EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004722 (Gene tree)
Gene ID: 103386097
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4435 bases
Position: chr11:5826647-5831081
Accession: 103386097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007321	FDF	PF09532.10	1.9e-11	1	1
ENSCSEP00000007321	SM-ATX	PF14438.6	8.9e-09	1	1
ENSCSEP00000007321	LSM14	PF12701.7	1.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007399	-	3508	XM_008320207	ENSCSEP00000007321	374 (aa)	XP_008318429	UPI0004985AE4

Gene Model

Click here to download ENSCSEG00000004722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004722	lsm14b	93	47.107	ENSCSEG00000020669	LSM14B	90	46.154
ENSCSEG00000004722	lsm14b	91	37.275	ENSCSEG00000021457	lsm14aa	91	74.194
ENSCSEG00000004722	lsm14b	91	43.467	ENSCSEG00000011324	lsm14ab	84	43.467

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004722	lsm14b	93	52.603	ENSG00000149657	LSM14B	100	51.923	Homo_sapiens
ENSCSEG00000004722	lsm14b	100	77.394	ENSAPOG00000001780	lsm14b	100	77.394	Acanthochromis_polyacanthus
ENSCSEG00000004722	lsm14b	91	46.929	ENSAMEG00000013430	LSM14B	91	46.402	Ailuropoda_melanoleuca
ENSCSEG00000004722	lsm14b	99	70.350	ENSACIG00000012266	lsm14b	99	70.620	Amphilophus_citrinellus
ENSCSEG00000004722	lsm14b	61	38.776	ENSACIG00000003147	LSM14B	85	40.506	Amphilophus_citrinellus
ENSCSEG00000004722	lsm14b	100	78.191	ENSAOCG00000012380	lsm14b	100	78.191	Amphiprion_ocellaris
ENSCSEG00000004722	lsm14b	96	47.059	ENSAOCG00000006667	LSM14B	89	46.974	Amphiprion_ocellaris
ENSCSEG00000004722	lsm14b	100	67.021	ENSAPEG00000023633	lsm14b	100	69.149	Amphiprion_percula
ENSCSEG00000004722	lsm14b	66	41.197	ENSATEG00000015895	LSM14B	87	40.636	Anabas_testudineus
ENSCSEG00000004722	lsm14b	91	75.362	ENSATEG00000016603	lsm14b	100	70.976	Anabas_testudineus
ENSCSEG00000004722	lsm14b	82	44.414	ENSAPLG00000013203	LSM14B	89	43.802	Anas_platyrhynchos
ENSCSEG00000004722	lsm14b	99	51.005	ENSACAG00000016195	LSM14B	90	51.657	Anolis_carolinensis
ENSCSEG00000004722	lsm14b	93	51.200	ENSANAG00000037915	LSM14B	91	50.943	Aotus_nancymaae
ENSCSEG00000004722	lsm14b	99	71.390	ENSACLG00000019663	lsm14b	99	72.460	Astatotilapia_calliptera
ENSCSEG00000004722	lsm14b	90	59.610	ENSAMXG00000002865	lsm14b	99	59.343	Astyanax_mexicanus
ENSCSEG00000004722	lsm14b	93	46.860	ENSBTAG00000021558	LSM14B	92	46.324	Bos_taurus
ENSCSEG00000004722	lsm14b	93	52.473	ENSCJAG00000014434	LSM14B	91	52.222	Callithrix_jacchus
ENSCSEG00000004722	lsm14b	82	44.173	ENSCAFG00000012518	LSM14B	89	43.132	Canis_familiaris
ENSCSEG00000004722	lsm14b	93	52.432	ENSCAFG00020022150	LSM14B	91	51.507	Canis_lupus_dingo
ENSCSEG00000004722	lsm14b	99	39.599	ENSCHIG00000022681	-	90	40.496	Capra_hircus
ENSCSEG00000004722	lsm14b	93	51.467	ENSCHIG00000010284	-	91	50.949	Capra_hircus
ENSCSEG00000004722	lsm14b	81	49.533	ENSTSYG00000031914	LSM14B	79	48.896	Carlito_syrichta
ENSCSEG00000004722	lsm14b	81	49.226	ENSCAPG00000013059	LSM14B	90	48.589	Cavia_aperea
ENSCSEG00000004722	lsm14b	81	49.379	ENSCPOG00000038080	LSM14B	89	48.742	Cavia_porcellus
ENSCSEG00000004722	lsm14b	93	50.396	ENSCCAG00000021267	LSM14B	91	51.081	Cebus_capucinus
ENSCSEG00000004722	lsm14b	91	37.673	ENSCCAG00000024900	-	75	36.533	Cebus_capucinus
ENSCSEG00000004722	lsm14b	93	52.732	ENSCATG00000036006	LSM14B	91	52.632	Cercocebus_atys
ENSCSEG00000004722	lsm14b	81	49.231	ENSCLAG00000003186	LSM14B	89	48.598	Chinchilla_lanigera
ENSCSEG00000004722	lsm14b	93	46.569	ENSCSAG00000015729	LSM14B	92	46.402	Chlorocebus_sabaeus
ENSCSEG00000004722	lsm14b	91	48.387	ENSCPBG00000027065	LSM14B	91	47.619	Chrysemys_picta_bellii
ENSCSEG00000004722	lsm14b	81	48.466	ENSCANG00000036986	LSM14B	89	48.287	Colobus_angolensis_palliatus
ENSCSEG00000004722	lsm14b	93	52.785	ENSCGRG00001018399	Lsm14b	91	52.022	Cricetulus_griseus_chok1gshd
ENSCSEG00000004722	lsm14b	61	39.116	ENSCGRG00000006111	-	89	38.194	Cricetulus_griseus_crigri
ENSCSEG00000004722	lsm14b	55	43.243	ENSCGRG00000002484	-	82	42.202	Cricetulus_griseus_crigri
ENSCSEG00000004722	lsm14b	63	38.956	ENSCVAG00000012433	-	85	36.596	Cyprinodon_variegatus
ENSCSEG00000004722	lsm14b	91	55.679	ENSDARG00000025386	lsm14b	90	55.493	Danio_rerio
ENSCSEG00000004722	lsm14b	61	39.223	ENSDNOG00000025246	LSM14B	87	38.489	Dasypus_novemcinctus
ENSCSEG00000004722	lsm14b	82	49.390	ENSDORG00000016683	Lsm14b	78	48.765	Dipodomys_ordii
ENSCSEG00000004722	lsm14b	93	43.324	ENSETEG00000001869	-	89	43.020	Echinops_telfairi
ENSCSEG00000004722	lsm14b	57	39.407	ENSETEG00000011188	-	99	39.357	Echinops_telfairi
ENSCSEG00000004722	lsm14b	61	45.041	ENSEASG00005023218	LSM14B	84	44.118	Equus_asinus_asinus
ENSCSEG00000004722	lsm14b	93	52.304	ENSECAG00000010659	LSM14B	91	51.781	Equus_caballus
ENSCSEG00000004722	lsm14b	99	60.260	ENSELUG00000005780	lsm14b	90	60.458	Esox_lucius
ENSCSEG00000004722	lsm14b	90	49.859	ENSELUG00000016299	LSM14B	90	49.859	Esox_lucius
ENSCSEG00000004722	lsm14b	93	51.200	ENSFCAG00000003248	LSM14B	91	51.226	Felis_catus
ENSCSEG00000004722	lsm14b	82	44.414	ENSFALG00000010618	LSM14B	91	43.802	Ficedula_albicollis
ENSCSEG00000004722	lsm14b	81	49.844	ENSFDAG00000002214	LSM14B	89	49.211	Fukomys_damarensis
ENSCSEG00000004722	lsm14b	100	67.819	ENSFHEG00000006237	lsm14b	100	67.819	Fundulus_heteroclitus
ENSCSEG00000004722	lsm14b	70	48.364	ENSFHEG00000003362	LSM14B	70	49.643	Fundulus_heteroclitus
ENSCSEG00000004722	lsm14b	100	64.116	ENSGMOG00000017115	lsm14b	99	64.644	Gadus_morhua
ENSCSEG00000004722	lsm14b	91	51.459	ENSGALG00000005125	LSM14B	90	52.500	Gallus_gallus
ENSCSEG00000004722	lsm14b	100	65.608	ENSGAFG00000020318	lsm14b	100	65.608	Gambusia_affinis
ENSCSEG00000004722	lsm14b	66	41.085	ENSGAFG00000013723	LSM14B	85	40.426	Gambusia_affinis
ENSCSEG00000004722	lsm14b	99	72.267	ENSGACG00000009973	lsm14b	90	73.021	Gasterosteus_aculeatus
ENSCSEG00000004722	lsm14b	56	40.598	ENSGAGG00000004106	LSM14B	78	41.364	Gopherus_agassizii
ENSCSEG00000004722	lsm14b	83	48.476	ENSGGOG00000005630	LSM14B	85	47.840	Gorilla_gorilla
ENSCSEG00000004722	lsm14b	93	53.022	ENSHGLG00000015055	LSM14B	91	52.500	Heterocephalus_glaber_female
ENSCSEG00000004722	lsm14b	81	50.000	ENSHGLG00100015273	LSM14B	89	49.363	Heterocephalus_glaber_male
ENSCSEG00000004722	lsm14b	95	46.791	ENSHCOG00000018747	LSM14B	90	48.246	Hippocampus_comes
ENSCSEG00000004722	lsm14b	68	53.846	ENSHCOG00000004867	lsm14b	99	55.000	Hippocampus_comes
ENSCSEG00000004722	lsm14b	91	58.127	ENSIPUG00000014946	lsm14b	86	59.104	Ictalurus_punctatus
ENSCSEG00000004722	lsm14b	81	49.080	ENSSTOG00000020482	LSM14B	89	49.221	Ictidomys_tridecemlineatus
ENSCSEG00000004722	lsm14b	91	52.162	ENSJJAG00000012728	Lsm14b	89	52.394	Jaculus_jaculus
ENSCSEG00000004722	lsm14b	91	73.099	ENSKMAG00000017524	lsm14b	92	73.099	Kryptolebias_marmoratus
ENSCSEG00000004722	lsm14b	52	39.109	ENSKMAG00000012834	-	86	38.579	Kryptolebias_marmoratus
ENSCSEG00000004722	lsm14b	90	49.114	ENSLACG00000003849	LSM14B	91	49.114	Latimeria_chalumnae
ENSCSEG00000004722	lsm14b	90	55.932	ENSLOCG00000003746	lsm14b	90	57.062	Lepisosteus_oculatus
ENSCSEG00000004722	lsm14b	82	46.646	ENSLAFG00000007492	LSM14B	90	47.826	Loxodonta_africana
ENSCSEG00000004722	lsm14b	93	52.329	ENSMFAG00000041479	LSM14B	91	51.944	Macaca_fascicularis
ENSCSEG00000004722	lsm14b	93	52.329	ENSMMUG00000014084	LSM14B	91	51.944	Macaca_mulatta
ENSCSEG00000004722	lsm14b	93	52.329	ENSMNEG00000045573	LSM14B	91	51.944	Macaca_nemestrina
ENSCSEG00000004722	lsm14b	81	49.536	ENSMLEG00000040895	LSM14B	89	49.371	Mandrillus_leucophaeus
ENSCSEG00000004722	lsm14b	100	72.944	ENSMAMG00000020539	lsm14b	100	72.944	Mastacembelus_armatus
ENSCSEG00000004722	lsm14b	93	50.546	ENSMAMG00000024124	LSM14B	89	50.000	Mastacembelus_armatus
ENSCSEG00000004722	lsm14b	99	71.123	ENSMZEG00005000987	lsm14b	99	72.193	Maylandia_zebra
ENSCSEG00000004722	lsm14b	92	46.825	ENSMZEG00005026001	LSM14B	93	48.361	Maylandia_zebra
ENSCSEG00000004722	lsm14b	82	46.018	ENSMGAG00000005300	LSM14B	89	48.000	Meleagris_gallopavo
ENSCSEG00000004722	lsm14b	93	53.279	ENSMAUG00000020700	Lsm14b	91	52.762	Mesocricetus_auratus
ENSCSEG00000004722	lsm14b	93	53.297	ENSMICG00000014675	LSM14B	91	53.444	Microcebus_murinus
ENSCSEG00000004722	lsm14b	61	37.175	ENSMOCG00000005119	-	90	36.122	Microtus_ochrogaster
ENSCSEG00000004722	lsm14b	93	53.279	ENSMOCG00000020600	Lsm14b	91	52.762	Microtus_ochrogaster
ENSCSEG00000004722	lsm14b	92	65.940	ENSMMOG00000020042	lsm14b	95	65.940	Mola_mola
ENSCSEG00000004722	lsm14b	91	50.282	ENSMMOG00000017321	LSM14B	89	50.289	Mola_mola
ENSCSEG00000004722	lsm14b	61	38.516	ENSMODG00000016690	LSM14B	87	37.634	Monodelphis_domestica
ENSCSEG00000004722	lsm14b	91	49.573	ENSMALG00000022251	LSM14B	90	48.837	Monopterus_albus
ENSCSEG00000004722	lsm14b	100	71.011	ENSMALG00000004783	lsm14b	88	73.684	Monopterus_albus
ENSCSEG00000004722	lsm14b	93	51.862	MGP_CAROLIEiJ_G0024770	Lsm14b	91	51.351	Mus_caroli
ENSCSEG00000004722	lsm14b	93	51.862	ENSMUSG00000039108	Lsm14b	91	51.351	Mus_musculus
ENSCSEG00000004722	lsm14b	93	52.255	MGP_PahariEiJ_G0026214	Lsm14b	91	52.210	Mus_pahari
ENSCSEG00000004722	lsm14b	93	51.862	MGP_SPRETEiJ_G0025693	Lsm14b	91	51.351	Mus_spretus
ENSCSEG00000004722	lsm14b	87	44.241	ENSMPUG00000007584	LSM14B	91	43.386	Mustela_putorius_furo
ENSCSEG00000004722	lsm14b	91	51.491	ENSMLUG00000000304	LSM14B	91	52.044	Myotis_lucifugus
ENSCSEG00000004722	lsm14b	59	40.079	ENSNGAG00000016550	Lsm14b	84	40.187	Nannospalax_galili
ENSCSEG00000004722	lsm14b	81	48.910	ENSNLEG00000015757	LSM14B	89	48.580	Nomascus_leucogenys
ENSCSEG00000004722	lsm14b	66	70.423	ENSMEUG00000008267	-	91	45.924	Notamacropus_eugenii
ENSCSEG00000004722	lsm14b	93	53.297	ENSODEG00000004099	LSM14B	91	52.778	Octodon_degus
ENSCSEG00000004722	lsm14b	99	72.727	ENSONIG00000020318	lsm14b	99	73.797	Oreochromis_niloticus
ENSCSEG00000004722	lsm14b	74	51.957	ENSOANG00000003370	LSM14B	96	52.313	Ornithorhynchus_anatinus
ENSCSEG00000004722	lsm14b	82	50.000	ENSOCUG00000006279	LSM14B	90	49.375	Oryctolagus_cuniculus
ENSCSEG00000004722	lsm14b	100	72.340	ENSORLG00000013525	lsm14b	100	73.404	Oryzias_latipes
ENSCSEG00000004722	lsm14b	93	42.978	ENSORLG00000028353	LSM14B	90	43.567	Oryzias_latipes
ENSCSEG00000004722	lsm14b	62	34.884	ENSORLG00020018191	-	83	35.484	Oryzias_latipes_hni
ENSCSEG00000004722	lsm14b	100	72.340	ENSORLG00020020553	lsm14b	100	73.404	Oryzias_latipes_hni
ENSCSEG00000004722	lsm14b	93	43.137	ENSORLG00015013157	LSM14B	90	43.732	Oryzias_latipes_hsok
ENSCSEG00000004722	lsm14b	100	72.340	ENSORLG00015016862	lsm14b	100	73.404	Oryzias_latipes_hsok
ENSCSEG00000004722	lsm14b	100	72.074	ENSOMEG00000023917	lsm14b	100	73.138	Oryzias_melastigma
ENSCSEG00000004722	lsm14b	65	38.211	ENSOMEG00000000171	-	81	37.778	Oryzias_melastigma
ENSCSEG00000004722	lsm14b	93	47.525	ENSOGAG00000003915	LSM14B	92	47.368	Otolemur_garnettii
ENSCSEG00000004722	lsm14b	83	42.744	ENSOARG00000014706	LSM14B	88	42.623	Ovis_aries
ENSCSEG00000004722	lsm14b	83	48.476	ENSPPAG00000035799	LSM14B	85	47.840	Pan_paniscus
ENSCSEG00000004722	lsm14b	93	51.467	ENSPPRG00000009197	LSM14B	91	50.959	Panthera_pardus
ENSCSEG00000004722	lsm14b	61	43.802	ENSPTIG00000021518	LSM14B	87	42.437	Panthera_tigris_altaica
ENSCSEG00000004722	lsm14b	93	52.603	ENSPTRG00000013696	LSM14B	91	51.801	Pan_troglodytes
ENSCSEG00000004722	lsm14b	93	52.304	ENSPANG00000011747	LSM14B	91	52.198	Papio_anubis
ENSCSEG00000004722	lsm14b	100	56.675	ENSPKIG00000003275	lsm14b	96	73.874	Paramormyrops_kingsleyae
ENSCSEG00000004722	lsm14b	82	50.153	ENSPSIG00000014762	LSM14B	90	49.536	Pelodiscus_sinensis
ENSCSEG00000004722	lsm14b	91	53.591	ENSPEMG00000017688	Lsm14b	91	53.073	Peromyscus_maniculatus_bairdii
ENSCSEG00000004722	lsm14b	93	52.732	ENSPCIG00000013405	LSM14B	91	52.210	Phascolarctos_cinereus
ENSCSEG00000004722	lsm14b	100	68.883	ENSPFOG00000005631	lsm14b	100	68.883	Poecilia_formosa
ENSCSEG00000004722	lsm14b	100	68.351	ENSPLAG00000002449	lsm14b	100	68.351	Poecilia_latipinna
ENSCSEG00000004722	lsm14b	90	46.197	ENSPLAG00000005793	LSM14B	89	46.875	Poecilia_latipinna
ENSCSEG00000004722	lsm14b	100	69.149	ENSPMEG00000000745	lsm14b	100	69.149	Poecilia_mexicana
ENSCSEG00000004722	lsm14b	89	47.965	ENSPMEG00000022953	LSM14B	89	48.844	Poecilia_mexicana
ENSCSEG00000004722	lsm14b	62	37.450	ENSPREG00000007828	LSM14B	85	38.115	Poecilia_reticulata
ENSCSEG00000004722	lsm14b	93	49.728	ENSPPYG00000011194	LSM14B	91	48.800	Pongo_abelii
ENSCSEG00000004722	lsm14b	93	53.297	ENSPCOG00000013625	LSM14B	91	52.778	Propithecus_coquereli
ENSCSEG00000004722	lsm14b	72	40.767	ENSPVAG00000017918	LSM14B	100	41.121	Pteropus_vampyrus
ENSCSEG00000004722	lsm14b	90	60.684	ENSPNAG00000012777	lsm14b	99	58.140	Pygocentrus_nattereri
ENSCSEG00000004722	lsm14b	93	46.651	ENSRNOG00000054557	Lsm14b	92	46.883	Rattus_norvegicus
ENSCSEG00000004722	lsm14b	81	48.624	ENSRBIG00000033461	LSM14B	89	48.447	Rhinopithecus_bieti
ENSCSEG00000004722	lsm14b	83	49.550	ENSRROG00000042949	LSM14B	81	49.390	Rhinopithecus_roxellana
ENSCSEG00000004722	lsm14b	81	49.221	ENSSBOG00000032820	LSM14B	89	48.580	Saimiri_boliviensis_boliviensis
ENSCSEG00000004722	lsm14b	82	48.773	ENSSHAG00000015528	LSM14B	86	48.137	Sarcophilus_harrisii
ENSCSEG00000004722	lsm14b	90	56.780	ENSSFOG00015004627	lsm14b	90	58.310	Scleropages_formosus
ENSCSEG00000004722	lsm14b	100	79.790	ENSSMAG00000012725	lsm14b	100	79.790	Scophthalmus_maximus
ENSCSEG00000004722	lsm14b	95	48.825	ENSSMAG00000000135	LSM14B	89	49.859	Scophthalmus_maximus
ENSCSEG00000004722	lsm14b	91	50.992	ENSSDUG00000022770	LSM14B	89	50.435	Seriola_dumerili
ENSCSEG00000004722	lsm14b	100	80.475	ENSSDUG00000020977	lsm14b	100	80.475	Seriola_dumerili
ENSCSEG00000004722	lsm14b	62	45.600	ENSSLDG00000011354	-	86	44.269	Seriola_lalandi_dorsalis
ENSCSEG00000004722	lsm14b	53	38.596	ENSSARG00000007749	-	99	39.091	Sorex_araneus
ENSCSEG00000004722	lsm14b	91	48.379	ENSSPUG00000014360	LSM14B	96	50.142	Sphenodon_punctatus
ENSCSEG00000004722	lsm14b	100	71.809	ENSSPAG00000020915	lsm14b	100	73.138	Stegastes_partitus
ENSCSEG00000004722	lsm14b	66	37.906	ENSSPAG00000018854	-	85	36.546	Stegastes_partitus
ENSCSEG00000004722	lsm14b	93	51.733	ENSSSCG00000026052	LSM14B	75	52.500	Sus_scrofa
ENSCSEG00000004722	lsm14b	82	49.693	ENSTGUG00000007884	LSM14B	90	48.916	Taeniopygia_guttata
ENSCSEG00000004722	lsm14b	100	69.415	ENSTRUG00000011354	lsm14b	100	69.415	Takifugu_rubripes
ENSCSEG00000004722	lsm14b	91	51.977	ENSTRUG00000001529	LSM14B	89	51.003	Takifugu_rubripes
ENSCSEG00000004722	lsm14b	100	64.975	ENSTNIG00000002445	lsm14b	91	65.556	Tetraodon_nigroviridis
ENSCSEG00000004722	lsm14b	75	76.190	ENSTTRG00000011043	LSM14B	91	37.940	Tursiops_truncatus
ENSCSEG00000004722	lsm14b	90	47.091	ENSUAMG00000025298	LSM14B	89	47.309	Ursus_americanus
ENSCSEG00000004722	lsm14b	90	47.091	ENSUMAG00000000480	LSM14B	89	47.309	Ursus_maritimus
ENSCSEG00000004722	lsm14b	82	49.091	ENSVVUG00000015920	LSM14B	88	48.000	Vulpes_vulpes
ENSCSEG00000004722	lsm14b	86	51.775	ENSXETG00000001997	lsm14b	99	51.775	Xenopus_tropicalis
ENSCSEG00000004722	lsm14b	100	68.883	ENSXMAG00000010013	lsm14b	100	68.883	Xiphophorus_maculatus