EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004825 (Gene tree)
Gene ID: 103387240
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1572 bases
Position: chr12:6537968-6539539
Accession: 103387240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007521	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007600	-	597	XM_008321785	ENSCSEP00000007521	198 (aa)	XP_008320007	UPI000497C437

Gene Model

Click here to download ENSCSEG00000004825's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004825	sar1ab	87	31.977	ENSCSEG00000013309	arl3	86	31.977
ENSCSEG00000004825	sar1ab	93	31.720	ENSCSEG00000006004	arf5	95	31.720
ENSCSEG00000004825	sar1ab	79	32.353	ENSCSEG00000012307	-	84	32.353
ENSCSEG00000004825	sar1ab	99	30.457	ENSCSEG00000007217	-	98	30.457
ENSCSEG00000004825	sar1ab	56	37.391	ENSCSEG00000014890	arl4aa	67	35.115
ENSCSEG00000004825	sar1ab	66	36.765	ENSCSEG00000010194	-	67	36.765
ENSCSEG00000004825	sar1ab	64	32.812	ENSCSEG00000021772	arl8ba	69	32.812
ENSCSEG00000004825	sar1ab	85	33.529	ENSCSEG00000017926	-	78	33.529
ENSCSEG00000004825	sar1ab	89	31.461	ENSCSEG00000012285	-	92	31.461
ENSCSEG00000004825	sar1ab	59	31.624	ENSCSEG00000003442	arl5a	71	31.624
ENSCSEG00000004825	sar1ab	67	36.232	ENSCSEG00000005387	-	70	36.232
ENSCSEG00000004825	sar1ab	64	36.364	ENSCSEG00000000838	arl4cb	61	36.364
ENSCSEG00000004825	sar1ab	64	32.812	ENSCSEG00000014248	-	60	32.812
ENSCSEG00000004825	sar1ab	94	30.526	ENSCSEG00000005784	ARL6	96	30.526
ENSCSEG00000004825	sar1ab	53	35.849	ENSCSEG00000013136	-	57	35.849
ENSCSEG00000004825	sar1ab	92	82.967	ENSCSEG00000015238	sar1b	90	82.967
ENSCSEG00000004825	sar1ab	85	30.357	ENSCSEG00000000522	arl8	87	30.357
ENSCSEG00000004825	sar1ab	79	31.646	ENSCSEG00000009161	arl11	91	31.646
ENSCSEG00000004825	sar1ab	64	33.594	ENSCSEG00000018609	arl8a	73	33.594
ENSCSEG00000004825	sar1ab	68	34.815	ENSCSEG00000016811	arl2	73	34.815
ENSCSEG00000004825	sar1ab	94	30.108	ENSCSEG00000010824	arl3l2	93	30.108
ENSCSEG00000004825	sar1ab	56	37.391	ENSCSEG00000007479	ARL4A	66	35.115
ENSCSEG00000004825	sar1ab	86	30.409	ENSCSEG00000018550	-	87	30.409
ENSCSEG00000004825	sar1ab	100	81.818	ENSCSEG00000016976	-	100	81.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004825	sar1ab	100	89.394	ENSACIG00000019827	sar1ab	100	89.394	Amphilophus_citrinellus
ENSCSEG00000004825	sar1ab	100	92.929	ENSAOCG00000022062	sar1ab	100	92.929	Amphiprion_ocellaris
ENSCSEG00000004825	sar1ab	100	92.929	ENSAPEG00000011525	sar1ab	100	92.929	Amphiprion_percula
ENSCSEG00000004825	sar1ab	100	95.455	ENSATEG00000003466	sar1ab	100	95.455	Anabas_testudineus
ENSCSEG00000004825	sar1ab	100	87.374	ENSACLG00000013053	sar1ab	100	87.374	Astatotilapia_calliptera
ENSCSEG00000004825	sar1ab	100	80.808	ENSCVAG00000006500	-	100	80.808	Cyprinodon_variegatus
ENSCSEG00000004825	sar1ab	100	89.394	ENSCVAG00000015162	sar1ab	100	89.394	Cyprinodon_variegatus
ENSCSEG00000004825	sar1ab	100	90.404	ENSDARG00000033320	sar1ab	100	90.404	Danio_rerio
ENSCSEG00000004825	sar1ab	100	92.424	ENSELUG00000024279	sar1ab	100	92.424	Esox_lucius
ENSCSEG00000004825	sar1ab	100	82.828	ENSELUG00000013652	sar1a	100	82.828	Esox_lucius
ENSCSEG00000004825	sar1ab	100	82.323	ENSFHEG00000012352	-	100	82.323	Fundulus_heteroclitus
ENSCSEG00000004825	sar1ab	100	90.404	ENSFHEG00000021773	sar1ab	100	90.404	Fundulus_heteroclitus
ENSCSEG00000004825	sar1ab	100	91.414	ENSGMOG00000012588	sar1ab	100	91.414	Gadus_morhua
ENSCSEG00000004825	sar1ab	100	89.899	ENSGAFG00000009702	sar1ab	100	89.899	Gambusia_affinis
ENSCSEG00000004825	sar1ab	100	83.333	ENSGAFG00000004846	-	100	83.333	Gambusia_affinis
ENSCSEG00000004825	sar1ab	100	93.434	ENSGACG00000008616	sar1ab	100	93.434	Gasterosteus_aculeatus
ENSCSEG00000004825	sar1ab	100	87.374	ENSHBUG00000021221	sar1ab	100	87.374	Haplochromis_burtoni
ENSCSEG00000004825	sar1ab	100	92.424	ENSHCOG00000002845	sar1ab	80	92.424	Hippocampus_comes
ENSCSEG00000004825	sar1ab	100	88.889	ENSKMAG00000018006	sar1ab	100	88.889	Kryptolebias_marmoratus
ENSCSEG00000004825	sar1ab	100	93.939	ENSLBEG00000001114	sar1ab	100	93.939	Labrus_bergylta
ENSCSEG00000004825	sar1ab	100	95.455	ENSMAMG00000021314	sar1ab	100	95.455	Mastacembelus_armatus
ENSCSEG00000004825	sar1ab	100	87.374	ENSMZEG00005027606	sar1ab	100	87.374	Maylandia_zebra
ENSCSEG00000004825	sar1ab	100	94.949	ENSMMOG00000010360	sar1ab	100	94.949	Mola_mola
ENSCSEG00000004825	sar1ab	100	93.939	ENSMALG00000005831	sar1ab	100	93.939	Monopterus_albus
ENSCSEG00000004825	sar1ab	100	87.879	ENSNBRG00000018772	sar1ab	100	87.879	Neolamprologus_brichardi
ENSCSEG00000004825	sar1ab	100	88.384	ENSONIG00000018509	sar1ab	100	88.384	Oreochromis_niloticus
ENSCSEG00000004825	sar1ab	100	82.323	ENSORLG00000009132	-	90	82.323	Oryzias_latipes
ENSCSEG00000004825	sar1ab	100	89.899	ENSORLG00000006779	sar1ab	67	89.899	Oryzias_latipes
ENSCSEG00000004825	sar1ab	100	89.394	ENSORLG00020005458	sar1ab	100	89.394	Oryzias_latipes_hni
ENSCSEG00000004825	sar1ab	100	82.323	ENSORLG00020007024	-	90	82.323	Oryzias_latipes_hni
ENSCSEG00000004825	sar1ab	100	89.899	ENSORLG00015010542	sar1ab	100	89.899	Oryzias_latipes_hsok
ENSCSEG00000004825	sar1ab	100	81.818	ENSORLG00015006223	-	94	86.607	Oryzias_latipes_hsok
ENSCSEG00000004825	sar1ab	100	89.394	ENSOMEG00000004948	sar1ab	100	89.394	Oryzias_melastigma
ENSCSEG00000004825	sar1ab	100	82.323	ENSOMEG00000012020	-	100	82.323	Oryzias_melastigma
ENSCSEG00000004825	sar1ab	100	85.859	ENSPKIG00000007615	sar1ab	100	85.859	Paramormyrops_kingsleyae
ENSCSEG00000004825	sar1ab	100	94.949	ENSPMGG00000013330	sar1ab	100	94.949	Periophthalmus_magnuspinnatus
ENSCSEG00000004825	sar1ab	100	90.404	ENSPFOG00000023432	sar1ab	100	90.404	Poecilia_formosa
ENSCSEG00000004825	sar1ab	100	90.909	ENSPLAG00000023705	sar1ab	100	90.909	Poecilia_latipinna
ENSCSEG00000004825	sar1ab	100	81.818	ENSPMEG00000001717	-	100	81.818	Poecilia_mexicana
ENSCSEG00000004825	sar1ab	100	90.404	ENSPMEG00000000559	sar1ab	100	90.404	Poecilia_mexicana
ENSCSEG00000004825	sar1ab	100	90.404	ENSPREG00000016098	sar1ab	100	90.404	Poecilia_reticulata
ENSCSEG00000004825	sar1ab	100	87.879	ENSPNYG00000011603	sar1ab	100	87.879	Pundamilia_nyererei
ENSCSEG00000004825	sar1ab	100	90.909	ENSPNAG00000008007	sar1ab	100	90.909	Pygocentrus_nattereri
ENSCSEG00000004825	sar1ab	100	88.384	ENSSFOG00015014010	sar1a	100	88.384	Scleropages_formosus
ENSCSEG00000004825	sar1ab	72	78.322	ENSSMAG00000020758	sar1ab	95	78.322	Scophthalmus_maximus
ENSCSEG00000004825	sar1ab	100	94.949	ENSSDUG00000010773	sar1ab	100	94.949	Seriola_dumerili
ENSCSEG00000004825	sar1ab	100	94.949	ENSSLDG00000025558	sar1ab	100	94.949	Seriola_lalandi_dorsalis
ENSCSEG00000004825	sar1ab	100	92.424	ENSSPAG00000009194	sar1ab	100	92.424	Stegastes_partitus
ENSCSEG00000004825	sar1ab	100	93.939	ENSTRUG00000007269	sar1ab	100	93.939	Takifugu_rubripes
ENSCSEG00000004825	sar1ab	100	92.424	ENSTNIG00000008635	sar1ab	100	92.424	Tetraodon_nigroviridis
ENSCSEG00000004825	sar1ab	100	90.404	ENSXMAG00000003130	sar1ab	100	90.404	Xiphophorus_maculatus
ENSCSEG00000004825	sar1ab	100	82.828	ENSXMAG00000026223	SAR1A	100	82.828	Xiphophorus_maculatus