EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004910 (Gene tree)
Gene ID: 103391780
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5761 bases
Position: chr16:4658675-4664435
Accession: 103391780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007613	RNase_H2-Ydr279	PF09468.10	2.1e-16	1	1
ENSCSEP00000007612	RNase_H2-Ydr279	PF09468.10	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007693	-	3258	XM_017040018	ENSCSEP00000007613	282 (aa)	-	-
ENSCSET00000007692	-	3338	XM_017040017	ENSCSEP00000007612	305 (aa)	XP_016895506	UPI000497982F

Gene Model

Click here to download ENSCSEG00000004910's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004910	rnaseh2b	90	52.529	ENSG00000136104	RNASEH2B	99	51.082	Homo_sapiens
ENSCSEG00000004910	rnaseh2b	100	81.699	ENSAPOG00000010496	rnaseh2b	100	81.699	Acanthochromis_polyacanthus
ENSCSEG00000004910	rnaseh2b	92	51.515	ENSAMEG00000012040	RNASEH2B	93	51.273	Ailuropoda_melanoleuca
ENSCSEG00000004910	rnaseh2b	100	75.610	ENSACIG00000021991	rnaseh2b	100	75.610	Amphilophus_citrinellus
ENSCSEG00000004910	rnaseh2b	100	82.026	ENSAOCG00000013398	rnaseh2b	100	82.026	Amphiprion_ocellaris
ENSCSEG00000004910	rnaseh2b	100	81.699	ENSAPEG00000006033	rnaseh2b	100	81.699	Amphiprion_percula
ENSCSEG00000004910	rnaseh2b	100	84.314	ENSATEG00000008370	rnaseh2b	100	84.314	Anabas_testudineus
ENSCSEG00000004910	rnaseh2b	86	63.821	ENSAPLG00000008955	RNASEH2B	99	63.704	Anas_platyrhynchos
ENSCSEG00000004910	rnaseh2b	93	57.955	ENSACAG00000011679	RNASEH2B	93	57.194	Anolis_carolinensis
ENSCSEG00000004910	rnaseh2b	90	52.529	ENSANAG00000020662	RNASEH2B	86	52.239	Aotus_nancymaae
ENSCSEG00000004910	rnaseh2b	100	79.739	ENSACLG00000000467	rnaseh2b	100	79.739	Astatotilapia_calliptera
ENSCSEG00000004910	rnaseh2b	99	70.492	ENSAMXG00000014351	rnaseh2b	99	70.492	Astyanax_mexicanus
ENSCSEG00000004910	rnaseh2b	86	53.036	ENSBTAG00000020149	RNASEH2B	87	50.741	Bos_taurus
ENSCSEG00000004910	rnaseh2b	90	52.549	ENSCJAG00000008585	-	88	52.256	Callithrix_jacchus
ENSCSEG00000004910	rnaseh2b	72	46.829	ENSCJAG00000003822	-	80	47.222	Callithrix_jacchus
ENSCSEG00000004910	rnaseh2b	98	47.059	ENSCAFG00000004295	RNASEH2B	93	47.059	Canis_familiaris
ENSCSEG00000004910	rnaseh2b	87	53.036	ENSCAFG00020000250	RNASEH2B	88	51.119	Canis_lupus_dingo
ENSCSEG00000004910	rnaseh2b	84	47.679	ENSCHIG00000012982	-	83	47.679	Capra_hircus
ENSCSEG00000004910	rnaseh2b	90	51.765	ENSCHIG00000018220	RNASEH2B	87	51.504	Capra_hircus
ENSCSEG00000004910	rnaseh2b	90	51.362	ENSTSYG00000009176	-	87	51.119	Carlito_syrichta
ENSCSEG00000004910	rnaseh2b	87	45.714	ENSTSYG00000031177	-	86	44.737	Carlito_syrichta
ENSCSEG00000004910	rnaseh2b	90	43.969	ENSCAPG00000009978	RNASEH2B	91	44.776	Cavia_aperea
ENSCSEG00000004910	rnaseh2b	90	50.193	ENSCPOG00000032527	RNASEH2B	86	50.370	Cavia_porcellus
ENSCSEG00000004910	rnaseh2b	90	52.549	ENSCCAG00000026979	RNASEH2B	88	52.256	Cebus_capucinus
ENSCSEG00000004910	rnaseh2b	88	52.400	ENSCATG00000031336	RNASEH2B	74	52.107	Cercocebus_atys
ENSCSEG00000004910	rnaseh2b	90	53.696	ENSCLAG00000003517	RNASEH2B	74	53.358	Chinchilla_lanigera
ENSCSEG00000004910	rnaseh2b	89	51.373	ENSCSAG00000017701	RNASEH2B	81	51.128	Chlorocebus_sabaeus
ENSCSEG00000004910	rnaseh2b	94	42.268	ENSCHOG00000013688	RNASEH2B	94	42.955	Choloepus_hoffmanni
ENSCSEG00000004910	rnaseh2b	99	57.329	ENSCPBG00000008684	RNASEH2B	94	57.329	Chrysemys_picta_bellii
ENSCSEG00000004910	rnaseh2b	93	36.177	ENSCING00000016454	-	94	36.177	Ciona_intestinalis
ENSCSEG00000004910	rnaseh2b	90	51.538	ENSCANG00000041511	-	87	51.292	Colobus_angolensis_palliatus
ENSCSEG00000004910	rnaseh2b	89	53.785	ENSCGRG00001000611	Rnaseh2b	88	52.206	Cricetulus_griseus_chok1gshd
ENSCSEG00000004910	rnaseh2b	89	53.785	ENSCGRG00000006077	Rnaseh2b	88	52.206	Cricetulus_griseus_crigri
ENSCSEG00000004910	rnaseh2b	100	77.451	ENSCVAG00000005212	rnaseh2b	100	77.451	Cyprinodon_variegatus
ENSCSEG00000004910	rnaseh2b	99	71.475	ENSDARG00000005128	rnaseh2b	99	71.475	Danio_rerio
ENSCSEG00000004910	rnaseh2b	90	47.266	ENSDNOG00000034290	-	86	47.191	Dasypus_novemcinctus
ENSCSEG00000004910	rnaseh2b	90	50.775	ENSDNOG00000049666	-	87	50.558	Dasypus_novemcinctus
ENSCSEG00000004910	rnaseh2b	90	51.751	ENSDORG00000010708	Rnaseh2b	86	51.493	Dipodomys_ordii
ENSCSEG00000004910	rnaseh2b	87	42.915	ENSEBUG00000005965	rnaseh2b	99	41.379	Eptatretus_burgeri
ENSCSEG00000004910	rnaseh2b	90	52.918	ENSEASG00005017323	RNASEH2B	86	52.985	Equus_asinus_asinus
ENSCSEG00000004910	rnaseh2b	90	53.307	ENSECAG00000014262	RNASEH2B	86	53.358	Equus_caballus
ENSCSEG00000004910	rnaseh2b	100	74.267	ENSELUG00000019560	rnaseh2b	100	74.267	Esox_lucius
ENSCSEG00000004910	rnaseh2b	88	50.400	ENSFCAG00000014257	RNASEH2B	82	50.192	Felis_catus
ENSCSEG00000004910	rnaseh2b	91	61.776	ENSFALG00000008435	RNASEH2B	93	62.409	Ficedula_albicollis
ENSCSEG00000004910	rnaseh2b	90	51.362	ENSFDAG00000009920	RNASEH2B	93	51.493	Fukomys_damarensis
ENSCSEG00000004910	rnaseh2b	100	80.719	ENSFHEG00000012160	rnaseh2b	100	80.719	Fundulus_heteroclitus
ENSCSEG00000004910	rnaseh2b	100	73.702	ENSGMOG00000016830	rnaseh2b	100	73.702	Gadus_morhua
ENSCSEG00000004910	rnaseh2b	95	58.503	ENSGALG00000017015	RNASEH2B	99	58.958	Gallus_gallus
ENSCSEG00000004910	rnaseh2b	100	81.046	ENSGAFG00000021222	rnaseh2b	100	81.046	Gambusia_affinis
ENSCSEG00000004910	rnaseh2b	100	75.962	ENSGACG00000002821	rnaseh2b	100	75.962	Gasterosteus_aculeatus
ENSCSEG00000004910	rnaseh2b	91	61.776	ENSGAGG00000014722	RNASEH2B	98	61.091	Gopherus_agassizii
ENSCSEG00000004910	rnaseh2b	90	51.923	ENSGGOG00000001044	RNASEH2B	87	51.661	Gorilla_gorilla
ENSCSEG00000004910	rnaseh2b	100	81.185	ENSHBUG00000006049	rnaseh2b	100	81.185	Haplochromis_burtoni
ENSCSEG00000004910	rnaseh2b	90	51.751	ENSHGLG00100015953	RNASEH2B	91	51.866	Heterocephalus_glaber_male
ENSCSEG00000004910	rnaseh2b	100	77.895	ENSHCOG00000003318	rnaseh2b	100	77.895	Hippocampus_comes
ENSCSEG00000004910	rnaseh2b	100	74.267	ENSIPUG00000023815	rnaseh2b	100	74.267	Ictalurus_punctatus
ENSCSEG00000004910	rnaseh2b	90	51.765	ENSSTOG00000015126	RNASEH2B	91	51.504	Ictidomys_tridecemlineatus
ENSCSEG00000004910	rnaseh2b	92	51.341	ENSJJAG00000013335	Rnaseh2b	92	51.103	Jaculus_jaculus
ENSCSEG00000004910	rnaseh2b	100	81.373	ENSKMAG00000002198	rnaseh2b	100	81.373	Kryptolebias_marmoratus
ENSCSEG00000004910	rnaseh2b	100	80.392	ENSLBEG00000019331	rnaseh2b	100	80.392	Labrus_bergylta
ENSCSEG00000004910	rnaseh2b	74	61.792	ENSLACG00000010782	RNASEH2B	92	61.404	Latimeria_chalumnae
ENSCSEG00000004910	rnaseh2b	100	66.775	ENSLOCG00000009296	rnaseh2b	100	66.775	Lepisosteus_oculatus
ENSCSEG00000004910	rnaseh2b	88	51.600	ENSLAFG00000030158	RNASEH2B	88	49.815	Loxodonta_africana
ENSCSEG00000004910	rnaseh2b	90	52.140	ENSMFAG00000038464	-	86	51.866	Macaca_fascicularis
ENSCSEG00000004910	rnaseh2b	90	48.638	ENSMMUG00000021746	RNASEH2B	85	48.507	Macaca_mulatta
ENSCSEG00000004910	rnaseh2b	90	52.140	ENSMNEG00000030580	RNASEH2B	86	51.866	Macaca_nemestrina
ENSCSEG00000004910	rnaseh2b	90	51.538	ENSMLEG00000043911	-	87	51.292	Mandrillus_leucophaeus
ENSCSEG00000004910	rnaseh2b	100	83.333	ENSMAMG00000017109	rnaseh2b	100	83.333	Mastacembelus_armatus
ENSCSEG00000004910	rnaseh2b	100	77.152	ENSMZEG00005021926	rnaseh2b	100	77.152	Maylandia_zebra
ENSCSEG00000004910	rnaseh2b	86	62.348	ENSMGAG00000015025	RNASEH2B	96	61.957	Meleagris_gallopavo
ENSCSEG00000004910	rnaseh2b	89	53.386	ENSMAUG00000016520	Rnaseh2b	88	51.471	Mesocricetus_auratus
ENSCSEG00000004910	rnaseh2b	87	53.441	ENSMICG00000000528	RNASEH2B	87	51.493	Microcebus_murinus
ENSCSEG00000004910	rnaseh2b	99	80.137	ENSMMOG00000019799	rnaseh2b	99	82.807	Mola_mola
ENSCSEG00000004910	rnaseh2b	97	53.947	ENSMODG00000010775	RNASEH2B	98	53.947	Monodelphis_domestica
ENSCSEG00000004910	rnaseh2b	99	81.908	ENSMALG00000004463	rnaseh2b	99	81.908	Monopterus_albus
ENSCSEG00000004910	rnaseh2b	80	54.867	MGP_CAROLIEiJ_G0019389	Rnaseh2b	83	55.310	Mus_caroli
ENSCSEG00000004910	rnaseh2b	89	54.980	ENSMUSG00000021932	Rnaseh2b	88	52.941	Mus_musculus
ENSCSEG00000004910	rnaseh2b	93	38.291	MGP_PahariEiJ_G0030407	-	90	38.580	Mus_pahari
ENSCSEG00000004910	rnaseh2b	71	48.020	ENSMPUG00000018010	RNASEH2B	87	48.804	Mustela_putorius_furo
ENSCSEG00000004910	rnaseh2b	90	54.440	ENSMLUG00000004065	-	86	54.074	Myotis_lucifugus
ENSCSEG00000004910	rnaseh2b	100	80.065	ENSNBRG00000003253	rnaseh2b	100	80.065	Neolamprologus_brichardi
ENSCSEG00000004910	rnaseh2b	90	51.923	ENSNLEG00000003804	RNASEH2B	87	51.661	Nomascus_leucogenys
ENSCSEG00000004910	rnaseh2b	92	57.576	ENSMEUG00000003665	RNASEH2B	95	56.884	Notamacropus_eugenii
ENSCSEG00000004910	rnaseh2b	57	49.068	ENSOPRG00000003695	-	51	51.534	Ochotona_princeps
ENSCSEG00000004910	rnaseh2b	90	52.918	ENSODEG00000006793	-	87	52.985	Octodon_degus
ENSCSEG00000004910	rnaseh2b	75	48.815	ENSODEG00000005412	-	91	47.619	Octodon_degus
ENSCSEG00000004910	rnaseh2b	100	79.739	ENSONIG00000006657	rnaseh2b	100	79.739	Oreochromis_niloticus
ENSCSEG00000004910	rnaseh2b	93	58.209	ENSOANG00000015537	RNASEH2B	94	58.182	Ornithorhynchus_anatinus
ENSCSEG00000004910	rnaseh2b	90	49.805	ENSOCUG00000008904	RNASEH2B	84	50.746	Oryctolagus_cuniculus
ENSCSEG00000004910	rnaseh2b	99	76.490	ENSORLG00000011850	rnaseh2b	100	76.490	Oryzias_latipes
ENSCSEG00000004910	rnaseh2b	99	76.821	ENSORLG00020012081	rnaseh2b	100	76.821	Oryzias_latipes_hni
ENSCSEG00000004910	rnaseh2b	99	76.159	ENSORLG00015015468	rnaseh2b	100	76.159	Oryzias_latipes_hsok
ENSCSEG00000004910	rnaseh2b	99	77.152	ENSOMEG00000012441	rnaseh2b	100	77.152	Oryzias_melastigma
ENSCSEG00000004910	rnaseh2b	87	54.000	ENSOGAG00000016486	RNASEH2B	91	52.030	Otolemur_garnettii
ENSCSEG00000004910	rnaseh2b	92	51.341	ENSOARG00000008701	RNASEH2B	92	50.916	Ovis_aries
ENSCSEG00000004910	rnaseh2b	90	52.308	ENSPPAG00000026374	RNASEH2B	93	49.057	Pan_paniscus
ENSCSEG00000004910	rnaseh2b	90	49.808	ENSPPRG00000012450	RNASEH2B	89	49.632	Panthera_pardus
ENSCSEG00000004910	rnaseh2b	90	50.192	ENSPTIG00000013918	RNASEH2B	97	50.000	Panthera_tigris_altaica
ENSCSEG00000004910	rnaseh2b	91	51.711	ENSPTRG00000005886	RNASEH2B	97	53.360	Pan_troglodytes
ENSCSEG00000004910	rnaseh2b	90	51.538	ENSPANG00000022424	-	87	51.292	Papio_anubis
ENSCSEG00000004910	rnaseh2b	100	69.707	ENSPKIG00000013386	rnaseh2b	100	69.707	Paramormyrops_kingsleyae
ENSCSEG00000004910	rnaseh2b	58	54.494	ENSPSIG00000002224	RNASEH2B	83	54.494	Pelodiscus_sinensis
ENSCSEG00000004910	rnaseh2b	70	76.768	ENSPMGG00000010299	rnaseh2b	96	76.768	Periophthalmus_magnuspinnatus
ENSCSEG00000004910	rnaseh2b	92	52.107	ENSPEMG00000019721	Rnaseh2b	88	52.190	Peromyscus_maniculatus_bairdii
ENSCSEG00000004910	rnaseh2b	88	53.309	ENSPCIG00000014535	-	92	53.309	Phascolarctos_cinereus
ENSCSEG00000004910	rnaseh2b	100	81.169	ENSPFOG00000016722	rnaseh2b	100	81.169	Poecilia_formosa
ENSCSEG00000004910	rnaseh2b	100	81.373	ENSPLAG00000011755	rnaseh2b	100	81.373	Poecilia_latipinna
ENSCSEG00000004910	rnaseh2b	100	81.699	ENSPMEG00000002721	rnaseh2b	100	81.699	Poecilia_mexicana
ENSCSEG00000004910	rnaseh2b	100	80.719	ENSPREG00000007737	rnaseh2b	100	80.719	Poecilia_reticulata
ENSCSEG00000004910	rnaseh2b	90	51.923	ENSPPYG00000005378	RNASEH2B	86	51.661	Pongo_abelii
ENSCSEG00000004910	rnaseh2b	87	54.032	ENSPCOG00000026623	RNASEH2B	87	52.045	Propithecus_coquereli
ENSCSEG00000004910	rnaseh2b	78	50.893	ENSPVAG00000000508	RNASEH2B	88	50.638	Pteropus_vampyrus
ENSCSEG00000004910	rnaseh2b	100	80.836	ENSPNYG00000013552	rnaseh2b	100	80.836	Pundamilia_nyererei
ENSCSEG00000004910	rnaseh2b	99	70.492	ENSPNAG00000024825	rnaseh2b	99	70.492	Pygocentrus_nattereri
ENSCSEG00000004910	rnaseh2b	93	51.128	ENSRNOG00000009192	Rnaseh2b	88	51.825	Rattus_norvegicus
ENSCSEG00000004910	rnaseh2b	89	46.429	ENSRBIG00000036017	-	86	46.212	Rhinopithecus_bieti
ENSCSEG00000004910	rnaseh2b	90	51.751	ENSRBIG00000028928	-	86	51.493	Rhinopithecus_bieti
ENSCSEG00000004910	rnaseh2b	73	40.777	ENSRROG00000044915	-	79	42.381	Rhinopithecus_roxellana
ENSCSEG00000004910	rnaseh2b	90	51.751	ENSRROG00000018808	-	87	50.923	Rhinopithecus_roxellana
ENSCSEG00000004910	rnaseh2b	90	52.918	ENSSBOG00000008081	RNASEH2B	96	52.612	Saimiri_boliviensis_boliviensis
ENSCSEG00000004910	rnaseh2b	100	53.871	ENSSHAG00000016190	RNASEH2B	99	54.575	Sarcophilus_harrisii
ENSCSEG00000004910	rnaseh2b	99	69.836	ENSSFOG00015010190	rnaseh2b	99	69.836	Scleropages_formosus
ENSCSEG00000004910	rnaseh2b	100	82.680	ENSSMAG00000001546	rnaseh2b	100	82.680	Scophthalmus_maximus
ENSCSEG00000004910	rnaseh2b	100	83.660	ENSSDUG00000007567	rnaseh2b	100	83.660	Seriola_dumerili
ENSCSEG00000004910	rnaseh2b	100	81.605	ENSSLDG00000012485	rnaseh2b	100	81.605	Seriola_lalandi_dorsalis
ENSCSEG00000004910	rnaseh2b	95	54.074	ENSSPUG00000006745	-	95	54.167	Sphenodon_punctatus
ENSCSEG00000004910	rnaseh2b	100	82.680	ENSSPAG00000020926	rnaseh2b	100	82.680	Stegastes_partitus
ENSCSEG00000004910	rnaseh2b	86	54.472	ENSSSCG00000024385	RNASEH2B	95	54.472	Sus_scrofa
ENSCSEG00000004910	rnaseh2b	91	62.548	ENSTGUG00000012104	RNASEH2B	99	63.197	Taeniopygia_guttata
ENSCSEG00000004910	rnaseh2b	100	80.392	ENSTRUG00000015098	rnaseh2b	100	80.392	Takifugu_rubripes
ENSCSEG00000004910	rnaseh2b	100	78.247	ENSTNIG00000013861	rnaseh2b	100	78.247	Tetraodon_nigroviridis
ENSCSEG00000004910	rnaseh2b	90	43.798	ENSTTRG00000010761	RNASEH2B	87	44.610	Tursiops_truncatus
ENSCSEG00000004910	rnaseh2b	92	52.107	ENSUAMG00000022849	RNASEH2B	97	51.838	Ursus_americanus
ENSCSEG00000004910	rnaseh2b	92	51.341	ENSUMAG00000018556	RNASEH2B	97	51.103	Ursus_maritimus
ENSCSEG00000004910	rnaseh2b	86	55.285	ENSVPAG00000005679	RNASEH2B	92	52.985	Vicugna_pacos
ENSCSEG00000004910	rnaseh2b	88	53.200	ENSVVUG00000024015	RNASEH2B	81	52.030	Vulpes_vulpes
ENSCSEG00000004910	rnaseh2b	99	55.229	ENSXETG00000020720	rnaseh2b	99	55.229	Xenopus_tropicalis
ENSCSEG00000004910	rnaseh2b	100	80.612	ENSXCOG00000018732	rnaseh2b	100	80.612	Xiphophorus_couchianus
ENSCSEG00000004910	rnaseh2b	100	82.353	ENSXMAG00000022554	rnaseh2b	100	82.353	Xiphophorus_maculatus