EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004939 (Gene tree)
Gene ID: 103387246
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 12023 bases
Position: chr12:6696821-6708843
Accession: 103387246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007671	2OG-FeII_Oxy	PF03171.20	2.8e-08	1	1
ENSCSEP00000007661	2OG-FeII_Oxy	PF03171.20	2.9e-08	1	1
ENSCSEP00000007656	2OG-FeII_Oxy	PF03171.20	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007751	-	3929	XM_008321793	ENSCSEP00000007671	542 (aa)	XP_008320015	UPI0004972A1A
ENSCSET00000007736	-	4072	-	ENSCSEP00000007656	548 (aa)	-	-
ENSCSET00000007741	-	3929	XM_008321792	ENSCSEP00000007661	542 (aa)	XP_008320014	UPI000495A836

Gene Model

Click here to download ENSCSEG00000004939's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00330	Arginine and proline metabolism	KEGG
csem01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004939	p4ha1b	96	70.172	ENSCSEG00000001857	-	97	70.395
ENSCSEG00000004939	p4ha1b	100	56.624	ENSCSEG00000013215	p4ha2	99	56.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004939	p4ha1b	99	73.889	ENSG00000122884	P4HA1	100	73.889	Homo_sapiens
ENSCSEG00000004939	p4ha1b	100	86.813	ENSAPOG00000005170	p4ha1b	100	86.813	Acanthochromis_polyacanthus
ENSCSEG00000004939	p4ha1b	99	74.074	ENSAMEG00000017009	P4HA1	100	74.074	Ailuropoda_melanoleuca
ENSCSEG00000004939	p4ha1b	100	83.516	ENSACIG00000007255	p4ha1b	99	84.704	Amphilophus_citrinellus
ENSCSEG00000004939	p4ha1b	97	87.643	ENSAOCG00000001647	p4ha1b	99	86.949	Amphiprion_ocellaris
ENSCSEG00000004939	p4ha1b	99	63.100	ENSAPEG00000010402	-	99	63.100	Amphiprion_percula
ENSCSEG00000004939	p4ha1b	97	87.643	ENSAPEG00000005243	p4ha1b	99	86.949	Amphiprion_percula
ENSCSEG00000004939	p4ha1b	97	85.985	ENSATEG00000009272	p4ha1b	99	86.372	Anabas_testudineus
ENSCSEG00000004939	p4ha1b	96	74.667	ENSAPLG00000009284	P4HA1	100	74.667	Anas_platyrhynchos
ENSCSEG00000004939	p4ha1b	96	76.381	ENSACAG00000000564	P4HA1	99	75.000	Anolis_carolinensis
ENSCSEG00000004939	p4ha1b	99	73.889	ENSANAG00000024545	P4HA1	100	73.889	Aotus_nancymaae
ENSCSEG00000004939	p4ha1b	97	84.221	ENSACLG00000021556	p4ha1b	100	85.390	Astatotilapia_calliptera
ENSCSEG00000004939	p4ha1b	99	78.108	ENSAMXG00000011123	p4ha1b	99	78.108	Astyanax_mexicanus
ENSCSEG00000004939	p4ha1b	99	74.444	ENSBTAG00000032996	P4HA1	100	74.444	Bos_taurus
ENSCSEG00000004939	p4ha1b	99	73.704	ENSCJAG00000007429	P4HA1	98	76.923	Callithrix_jacchus
ENSCSEG00000004939	p4ha1b	99	74.349	ENSCAFG00000014573	P4HA1	99	74.349	Canis_familiaris
ENSCSEG00000004939	p4ha1b	99	72.963	ENSCAFG00020023993	P4HA1	97	76.023	Canis_lupus_dingo
ENSCSEG00000004939	p4ha1b	97	75.954	ENSCHIG00000013957	P4HA1	97	75.954	Capra_hircus
ENSCSEG00000004939	p4ha1b	99	74.074	ENSTSYG00000004004	P4HA1	100	77.869	Carlito_syrichta
ENSCSEG00000004939	p4ha1b	97	75.000	ENSCPOG00000015701	P4HA1	96	77.622	Cavia_porcellus
ENSCSEG00000004939	p4ha1b	99	73.889	ENSCATG00000029618	P4HA1	100	73.889	Cercocebus_atys
ENSCSEG00000004939	p4ha1b	99	73.567	ENSCLAG00000017260	P4HA1	100	73.567	Chinchilla_lanigera
ENSCSEG00000004939	p4ha1b	99	73.889	ENSCSAG00000008626	P4HA1	100	73.889	Chlorocebus_sabaeus
ENSCSEG00000004939	p4ha1b	99	73.840	ENSCPBG00000007933	P4HA1	99	73.840	Chrysemys_picta_bellii
ENSCSEG00000004939	p4ha1b	99	73.889	ENSCANG00000033147	P4HA1	100	73.889	Colobus_angolensis_palliatus
ENSCSEG00000004939	p4ha1b	99	72.509	ENSCGRG00001007006	P4ha1	100	73.529	Cricetulus_griseus_chok1gshd
ENSCSEG00000004939	p4ha1b	99	72.509	ENSCGRG00000009371	P4ha1	100	73.529	Cricetulus_griseus_crigri
ENSCSEG00000004939	p4ha1b	100	84.686	ENSCVAG00000016433	p4ha1b	99	84.686	Cyprinodon_variegatus
ENSCSEG00000004939	p4ha1b	97	80.228	ENSDARG00000071082	p4ha1b	99	78.637	Danio_rerio
ENSCSEG00000004939	p4ha1b	96	37.739	ENSDARG00000017038	zgc:152670	93	46.565	Danio_rerio
ENSCSEG00000004939	p4ha1b	98	73.034	ENSDNOG00000013665	P4HA1	93	73.034	Dasypus_novemcinctus
ENSCSEG00000004939	p4ha1b	99	74.074	ENSDORG00000003405	P4ha1	100	74.074	Dipodomys_ordii
ENSCSEG00000004939	p4ha1b	99	60.482	ENSEBUG00000005379	p4ha1b	98	60.482	Eptatretus_burgeri
ENSCSEG00000004939	p4ha1b	94	75.542	ENSEASG00005016606	P4HA1	96	77.622	Equus_asinus_asinus
ENSCSEG00000004939	p4ha1b	99	74.067	ENSECAG00000012496	P4HA1	99	75.875	Equus_caballus
ENSCSEG00000004939	p4ha1b	85	72.078	ENSEEUG00000005542	P4HA1	85	72.078	Erinaceus_europaeus
ENSCSEG00000004939	p4ha1b	99	80.037	ENSELUG00000005913	p4ha1b	99	80.583	Esox_lucius
ENSCSEG00000004939	p4ha1b	99	74.259	ENSFCAG00000018673	P4HA1	100	74.259	Felis_catus
ENSCSEG00000004939	p4ha1b	99	72.913	ENSFALG00000012773	P4HA1	99	72.913	Ficedula_albicollis
ENSCSEG00000004939	p4ha1b	99	67.096	ENSFDAG00000007094	P4HA1	99	67.096	Fukomys_damarensis
ENSCSEG00000004939	p4ha1b	100	85.923	ENSFHEG00000022856	p4ha1b	99	86.106	Fundulus_heteroclitus
ENSCSEG00000004939	p4ha1b	95	79.038	ENSGMOG00000018948	p4ha1b	100	79.038	Gadus_morhua
ENSCSEG00000004939	p4ha1b	99	73.792	ENSGALG00000004325	P4HA1	99	73.792	Gallus_gallus
ENSCSEG00000004939	p4ha1b	97	86.095	ENSGAFG00000019818	p4ha1b	99	85.451	Gambusia_affinis
ENSCSEG00000004939	p4ha1b	97	84.250	ENSGACG00000010233	p4ha1b	99	83.549	Gasterosteus_aculeatus
ENSCSEG00000004939	p4ha1b	99	73.889	ENSGGOG00000015551	P4HA1	100	73.889	Gorilla_gorilla
ENSCSEG00000004939	p4ha1b	97	84.221	ENSHBUG00000015524	p4ha1b	99	83.456	Haplochromis_burtoni
ENSCSEG00000004939	p4ha1b	99	73.752	ENSHGLG00000011764	P4HA1	100	73.752	Heterocephalus_glaber_female
ENSCSEG00000004939	p4ha1b	95	83.333	ENSHCOG00000017152	p4ha1b	100	83.527	Hippocampus_comes
ENSCSEG00000004939	p4ha1b	97	78.626	ENSIPUG00000015157	P4HA1	99	77.551	Ictalurus_punctatus
ENSCSEG00000004939	p4ha1b	99	73.889	ENSSTOG00000027062	P4HA1	100	74.183	Ictidomys_tridecemlineatus
ENSCSEG00000004939	p4ha1b	99	71.956	ENSJJAG00000004232	P4ha1	100	71.956	Jaculus_jaculus
ENSCSEG00000004939	p4ha1b	97	86.742	ENSKMAG00000001588	p4ha1b	100	86.081	Kryptolebias_marmoratus
ENSCSEG00000004939	p4ha1b	97	85.333	ENSLBEG00000018911	p4ha1b	99	84.715	Labrus_bergylta
ENSCSEG00000004939	p4ha1b	97	74.905	ENSLACG00000010202	P4HA1	100	73.346	Latimeria_chalumnae
ENSCSEG00000004939	p4ha1b	100	77.615	ENSLOCG00000008546	p4ha1b	99	77.615	Lepisosteus_oculatus
ENSCSEG00000004939	p4ha1b	99	73.978	ENSLAFG00000002652	P4HA1	99	73.978	Loxodonta_africana
ENSCSEG00000004939	p4ha1b	99	73.889	ENSMFAG00000030507	P4HA1	100	73.889	Macaca_fascicularis
ENSCSEG00000004939	p4ha1b	99	70.741	ENSMMUG00000011274	P4HA1	100	73.856	Macaca_mulatta
ENSCSEG00000004939	p4ha1b	99	72.388	ENSMNEG00000011433	P4HA1	99	73.512	Macaca_nemestrina
ENSCSEG00000004939	p4ha1b	95	69.515	ENSMLEG00000043338	P4HA1	100	80.328	Mandrillus_leucophaeus
ENSCSEG00000004939	p4ha1b	100	86.716	ENSMAMG00000015854	p4ha1b	100	86.716	Mastacembelus_armatus
ENSCSEG00000004939	p4ha1b	97	84.221	ENSMZEG00005027421	p4ha1b	99	83.456	Maylandia_zebra
ENSCSEG00000004939	p4ha1b	99	72.963	ENSMGAG00000005554	P4HA1	100	74.761	Meleagris_gallopavo
ENSCSEG00000004939	p4ha1b	99	59.926	ENSMAUG00000011056	P4ha1	96	67.320	Mesocricetus_auratus
ENSCSEG00000004939	p4ha1b	99	73.704	ENSMICG00000031365	P4HA1	100	73.856	Microcebus_murinus
ENSCSEG00000004939	p4ha1b	99	72.593	ENSMOCG00000017531	P4ha1	99	72.593	Microtus_ochrogaster
ENSCSEG00000004939	p4ha1b	97	87.238	ENSMMOG00000008022	p4ha1b	100	86.556	Mola_mola
ENSCSEG00000004939	p4ha1b	97	75.763	ENSMODG00000000121	P4HA1	96	75.763	Monodelphis_domestica
ENSCSEG00000004939	p4ha1b	97	87.452	ENSMALG00000019674	p4ha1b	99	86.740	Monopterus_albus
ENSCSEG00000004939	p4ha1b	99	73.856	MGP_CAROLIEiJ_G0015342	P4ha1	100	73.856	Mus_caroli
ENSCSEG00000004939	p4ha1b	99	72.509	ENSMUSG00000019916	P4ha1	100	72.509	Mus_musculus
ENSCSEG00000004939	p4ha1b	99	74.183	MGP_PahariEiJ_G0030758	P4ha1	100	74.183	Mus_pahari
ENSCSEG00000004939	p4ha1b	99	72.509	MGP_SPRETEiJ_G0016153	P4ha1	100	72.509	Mus_spretus
ENSCSEG00000004939	p4ha1b	99	74.074	ENSMPUG00000003940	P4HA1	100	74.074	Mustela_putorius_furo
ENSCSEG00000004939	p4ha1b	97	75.763	ENSMLUG00000006548	P4HA1	97	75.763	Myotis_lucifugus
ENSCSEG00000004939	p4ha1b	99	72.694	ENSNGAG00000014487	P4ha1	100	72.694	Nannospalax_galili
ENSCSEG00000004939	p4ha1b	97	83.491	ENSNBRG00000014791	p4ha1b	100	82.332	Neolamprologus_brichardi
ENSCSEG00000004939	p4ha1b	99	64.815	ENSNLEG00000035416	P4HA1	99	78.008	Nomascus_leucogenys
ENSCSEG00000004939	p4ha1b	91	67.617	ENSMEUG00000010326	P4HA1	95	67.617	Notamacropus_eugenii
ENSCSEG00000004939	p4ha1b	89	69.917	ENSOPRG00000000990	P4HA1	89	69.917	Ochotona_princeps
ENSCSEG00000004939	p4ha1b	86	73.203	ENSODEG00000015164	P4HA1	100	73.203	Octodon_degus
ENSCSEG00000004939	p4ha1b	97	84.280	ENSONIG00000000737	p4ha1b	89	83.700	Oreochromis_niloticus
ENSCSEG00000004939	p4ha1b	80	75.926	ENSOANG00000001125	-	100	75.926	Ornithorhynchus_anatinus
ENSCSEG00000004939	p4ha1b	99	72.509	ENSOCUG00000009739	P4HA1	100	72.509	Oryctolagus_cuniculus
ENSCSEG00000004939	p4ha1b	97	83.491	ENSORLG00000005147	p4ha1b	100	83.333	Oryzias_latipes
ENSCSEG00000004939	p4ha1b	97	83.302	ENSORLG00020010911	p4ha1b	99	82.569	Oryzias_latipes_hni
ENSCSEG00000004939	p4ha1b	89	82.922	ENSORLG00015016175	p4ha1b	98	81.520	Oryzias_latipes_hsok
ENSCSEG00000004939	p4ha1b	97	83.840	ENSOMEG00000009962	p4ha1b	100	83.486	Oryzias_melastigma
ENSCSEG00000004939	p4ha1b	99	73.616	ENSOGAG00000003483	P4HA1	100	73.616	Otolemur_garnettii
ENSCSEG00000004939	p4ha1b	97	75.954	ENSOARG00000007348	P4HA1	97	75.954	Ovis_aries
ENSCSEG00000004939	p4ha1b	99	68.324	ENSPPAG00000030135	P4HA1	100	80.328	Pan_paniscus
ENSCSEG00000004939	p4ha1b	99	74.259	ENSPPRG00000002655	P4HA1	100	74.259	Panthera_pardus
ENSCSEG00000004939	p4ha1b	99	74.259	ENSPTIG00000007711	P4HA1	100	74.259	Panthera_tigris_altaica
ENSCSEG00000004939	p4ha1b	99	69.074	ENSPTRG00000002619	P4HA1	100	71.698	Pan_troglodytes
ENSCSEG00000004939	p4ha1b	99	73.889	ENSPANG00000022355	P4HA1	100	73.889	Papio_anubis
ENSCSEG00000004939	p4ha1b	99	80.370	ENSPKIG00000000438	p4ha1b	99	80.370	Paramormyrops_kingsleyae
ENSCSEG00000004939	p4ha1b	99	74.397	ENSPSIG00000016298	P4HA1	100	73.978	Pelodiscus_sinensis
ENSCSEG00000004939	p4ha1b	97	82.476	ENSPMGG00000007593	p4ha1b	100	81.919	Periophthalmus_magnuspinnatus
ENSCSEG00000004939	p4ha1b	99	72.963	ENSPEMG00000006561	P4ha1	100	73.203	Peromyscus_maniculatus_bairdii
ENSCSEG00000004939	p4ha1b	99	74.397	ENSPCIG00000018768	P4HA1	99	74.397	Phascolarctos_cinereus
ENSCSEG00000004939	p4ha1b	97	85.905	ENSPFOG00000018574	p4ha1b	99	85.451	Poecilia_formosa
ENSCSEG00000004939	p4ha1b	97	86.476	ENSPLAG00000012628	p4ha1b	100	85.342	Poecilia_latipinna
ENSCSEG00000004939	p4ha1b	97	86.286	ENSPMEG00000024082	p4ha1b	99	85.820	Poecilia_mexicana
ENSCSEG00000004939	p4ha1b	97	86.095	ENSPREG00000010003	p4ha1b	99	85.635	Poecilia_reticulata
ENSCSEG00000004939	p4ha1b	99	73.889	ENSPPYG00000002348	P4HA1	100	73.889	Pongo_abelii
ENSCSEG00000004939	p4ha1b	95	68.093	ENSPCOG00000017553	P4HA1	100	80.738	Propithecus_coquereli
ENSCSEG00000004939	p4ha1b	97	68.702	ENSPVAG00000012989	P4HA1	97	68.702	Pteropus_vampyrus
ENSCSEG00000004939	p4ha1b	97	84.411	ENSPNYG00000002443	p4ha1b	99	83.640	Pundamilia_nyererei
ENSCSEG00000004939	p4ha1b	100	80.074	ENSPNAG00000023149	p4ha1b	100	80.074	Pygocentrus_nattereri
ENSCSEG00000004939	p4ha1b	99	73.519	ENSRNOG00000050655	P4ha1	100	73.519	Rattus_norvegicus
ENSCSEG00000004939	p4ha1b	99	65.556	ENSRBIG00000035304	P4HA1	100	65.556	Rhinopithecus_bieti
ENSCSEG00000004939	p4ha1b	99	73.889	ENSRROG00000044078	P4HA1	100	73.856	Rhinopithecus_roxellana
ENSCSEG00000004939	p4ha1b	71	71.867	ENSSHAG00000008056	P4HA1	100	72.379	Sarcophilus_harrisii
ENSCSEG00000004939	p4ha1b	99	78.090	ENSSFOG00015009176	p4ha1b	100	79.142	Scleropages_formosus
ENSCSEG00000004939	p4ha1b	100	87.109	ENSSMAG00000019199	p4ha1b	100	87.109	Scophthalmus_maximus
ENSCSEG00000004939	p4ha1b	97	88.571	ENSSDUG00000016587	p4ha1b	99	87.661	Seriola_dumerili
ENSCSEG00000004939	p4ha1b	97	88.190	ENSSLDG00000016261	p4ha1b	99	87.293	Seriola_lalandi_dorsalis
ENSCSEG00000004939	p4ha1b	99	70.741	ENSSARG00000003275	P4HA1	100	70.741	Sorex_araneus
ENSCSEG00000004939	p4ha1b	97	75.095	ENSSPUG00000002624	P4HA1	99	74.033	Sphenodon_punctatus
ENSCSEG00000004939	p4ha1b	85	85.714	ENSSPAG00000011193	p4ha1b	100	85.714	Stegastes_partitus
ENSCSEG00000004939	p4ha1b	99	74.259	ENSSSCG00000010292	P4HA1	100	74.259	Sus_scrofa
ENSCSEG00000004939	p4ha1b	99	72.913	ENSTGUG00000004364	-	99	72.913	Taeniopygia_guttata
ENSCSEG00000004939	p4ha1b	100	83.394	ENSTRUG00000004081	p4ha1b	100	84.489	Takifugu_rubripes
ENSCSEG00000004939	p4ha1b	100	84.686	ENSTNIG00000017021	p4ha1b	100	84.926	Tetraodon_nigroviridis
ENSCSEG00000004939	p4ha1b	99	73.333	ENSTTRG00000009782	P4HA1	100	73.333	Tursiops_truncatus
ENSCSEG00000004939	p4ha1b	99	74.074	ENSUMAG00000009024	P4HA1	100	74.074	Ursus_maritimus
ENSCSEG00000004939	p4ha1b	99	66.171	ENSVPAG00000007253	P4HA1	99	66.171	Vicugna_pacos
ENSCSEG00000004939	p4ha1b	99	74.349	ENSVVUG00000022660	P4HA1	99	74.349	Vulpes_vulpes
ENSCSEG00000004939	p4ha1b	99	70.501	ENSXETG00000006154	p4ha1	98	70.872	Xenopus_tropicalis
ENSCSEG00000004939	p4ha1b	97	85.255	ENSXCOG00000010262	p4ha1b	99	84.799	Xiphophorus_couchianus
ENSCSEG00000004939	p4ha1b	97	85.524	ENSXMAG00000003889	p4ha1b	99	84.899	Xiphophorus_maculatus