EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004958 (Gene tree)
Gene ID: 103391784
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 29958 bases
Position: chr16:4979688-5009645
Accession: 103391784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007688	CMS1	PF14617.6	4.8e-37	1	1
ENSCSEP00000007688	DEAD	PF00270.29	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007768	-	2003	XM_008328190	ENSCSEP00000007688	294 (aa)	XP_008326412	UPI0004951161

Gene Model

Click here to download ENSCSEG00000004958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004958	cmss1	100	50.492	ENSG00000184220	CMSS1	98	65.000	Homo_sapiens
ENSCSEG00000004958	cmss1	81	73.418	ENSAPOG00000010604	cmss1	82	82.266	Acanthochromis_polyacanthus
ENSCSEG00000004958	cmss1	69	62.562	ENSAMEG00000004092	CMSS1	78	62.562	Ailuropoda_melanoleuca
ENSCSEG00000004958	cmss1	91	65.169	ENSACIG00000021854	cmss1	99	65.283	Amphilophus_citrinellus
ENSCSEG00000004958	cmss1	100	68.707	ENSAOCG00000013361	cmss1	100	73.129	Amphiprion_ocellaris
ENSCSEG00000004958	cmss1	100	68.707	ENSAPEG00000005829	cmss1	100	73.129	Amphiprion_percula
ENSCSEG00000004958	cmss1	100	68.581	ENSATEG00000008209	cmss1	100	70.608	Anabas_testudineus
ENSCSEG00000004958	cmss1	69	66.337	ENSAPLG00000010542	CMSS1	88	66.337	Anas_platyrhynchos
ENSCSEG00000004958	cmss1	69	64.356	ENSACAG00000011065	CMSS1	74	64.356	Anolis_carolinensis
ENSCSEG00000004958	cmss1	100	49.836	ENSANAG00000023565	CMSS1	100	48.822	Aotus_nancymaae
ENSCSEG00000004958	cmss1	100	69.799	ENSACLG00000027294	cmss1	100	68.456	Astatotilapia_calliptera
ENSCSEG00000004958	cmss1	100	52.649	ENSAMXG00000002046	cmss1	100	54.209	Astyanax_mexicanus
ENSCSEG00000004958	cmss1	100	51.701	ENSBTAG00000013663	CMSS1	100	50.505	Bos_taurus
ENSCSEG00000004958	cmss1	100	50.164	ENSCJAG00000000610	CMSS1	100	49.664	Callithrix_jacchus
ENSCSEG00000004958	cmss1	69	63.861	ENSCAFG00000009230	CMSS1	73	63.861	Canis_familiaris
ENSCSEG00000004958	cmss1	69	61.881	ENSCAFG00020024156	-	63	61.881	Canis_lupus_dingo
ENSCSEG00000004958	cmss1	69	63.861	ENSCAFG00020009464	-	74	63.861	Canis_lupus_dingo
ENSCSEG00000004958	cmss1	93	52.190	ENSCHIG00000013003	CMSS1	73	61.881	Capra_hircus
ENSCSEG00000004958	cmss1	77	59.292	ENSTSYG00000009266	CMSS1	85	59.292	Carlito_syrichta
ENSCSEG00000004958	cmss1	71	51.185	ENSCAPG00000013584	CMSS1	87	53.927	Cavia_aperea
ENSCSEG00000004958	cmss1	100	52.881	ENSCPOG00000014680	CMSS1	100	52.189	Cavia_porcellus
ENSCSEG00000004958	cmss1	100	51.475	ENSCCAG00000034685	CMSS1	100	50.505	Cebus_capucinus
ENSCSEG00000004958	cmss1	100	50.658	ENSCATG00000031980	CMSS1	100	50.842	Cercocebus_atys
ENSCSEG00000004958	cmss1	68	62.500	ENSCLAG00000011241	CMSS1	87	62.871	Chinchilla_lanigera
ENSCSEG00000004958	cmss1	69	62.871	ENSCSAG00000006024	CMSS1	82	62.871	Chlorocebus_sabaeus
ENSCSEG00000004958	cmss1	100	39.073	ENSCHOG00000012098	CMSS1	100	37.710	Choloepus_hoffmanni
ENSCSEG00000004958	cmss1	64	44.737	ENSCING00000014848	-	99	44.920	Ciona_intestinalis
ENSCSEG00000004958	cmss1	100	50.987	ENSCANG00000031337	CMSS1	100	50.842	Colobus_angolensis_palliatus
ENSCSEG00000004958	cmss1	100	48.515	ENSCGRG00001014305	Cmss1	100	49.667	Cricetulus_griseus_chok1gshd
ENSCSEG00000004958	cmss1	77	59.556	ENSCGRG00000006722	Cmss1	79	61.881	Cricetulus_griseus_crigri
ENSCSEG00000004958	cmss1	100	68.243	ENSCVAG00000005039	cmss1	100	68.243	Cyprinodon_variegatus
ENSCSEG00000004958	cmss1	100	61.953	ENSDARG00000112579	cmss1	100	59.259	Danio_rerio
ENSCSEG00000004958	cmss1	77	61.135	ENSDNOG00000040418	CMSS1	73	63.861	Dasypus_novemcinctus
ENSCSEG00000004958	cmss1	100	52.721	ENSDORG00000010461	Cmss1	100	52.721	Dipodomys_ordii
ENSCSEG00000004958	cmss1	68	61.500	ENSEASG00005010966	CMSS1	92	61.881	Equus_asinus_asinus
ENSCSEG00000004958	cmss1	68	61.000	ENSECAG00000015662	CMSS1	89	61.386	Equus_caballus
ENSCSEG00000004958	cmss1	68	43.000	ENSEEUG00000007624	-	73	43.564	Erinaceus_europaeus
ENSCSEG00000004958	cmss1	100	58.170	ENSELUG00000019459	cmss1	100	58.824	Esox_lucius
ENSCSEG00000004958	cmss1	100	53.061	ENSFCAG00000044577	CMSS1	100	51.852	Felis_catus
ENSCSEG00000004958	cmss1	69	65.842	ENSFALG00000005816	CMSS1	85	65.842	Ficedula_albicollis
ENSCSEG00000004958	cmss1	69	61.881	ENSFDAG00000012577	CMSS1	89	61.881	Fukomys_damarensis
ENSCSEG00000004958	cmss1	77	74.222	ENSFHEG00000012008	cmss1	93	74.222	Fundulus_heteroclitus
ENSCSEG00000004958	cmss1	99	67.123	ENSGMOG00000016729	cmss1	100	65.636	Gadus_morhua
ENSCSEG00000004958	cmss1	95	56.115	ENSGALG00000015267	CMSS1	77	67.822	Gallus_gallus
ENSCSEG00000004958	cmss1	91	66.914	ENSGAFG00000021217	cmss1	77	75.862	Gambusia_affinis
ENSCSEG00000004958	cmss1	99	66.096	ENSGACG00000002798	cmss1	100	66.781	Gasterosteus_aculeatus
ENSCSEG00000004958	cmss1	95	55.516	ENSGAGG00000019861	CMSS1	79	66.337	Gopherus_agassizii
ENSCSEG00000004958	cmss1	69	62.376	ENSGGOG00000014125	CMSS1	77	62.376	Gorilla_gorilla
ENSCSEG00000004958	cmss1	100	69.024	ENSHBUG00000008431	cmss1	100	68.350	Haplochromis_burtoni
ENSCSEG00000004958	cmss1	68	62.000	ENSHGLG00000019481	CMSS1	82	62.376	Heterocephalus_glaber_female
ENSCSEG00000004958	cmss1	68	62.000	ENSHGLG00100010314	CMSS1	89	59.735	Heterocephalus_glaber_male
ENSCSEG00000004958	cmss1	100	65.552	ENSHCOG00000003222	cmss1	100	64.883	Hippocampus_comes
ENSCSEG00000004958	cmss1	100	56.146	ENSIPUG00000011591	cmss1	100	56.187	Ictalurus_punctatus
ENSCSEG00000004958	cmss1	100	51.852	ENSSTOG00000019366	CMSS1	100	49.495	Ictidomys_tridecemlineatus
ENSCSEG00000004958	cmss1	100	50.836	ENSJJAG00000014894	Cmss1	90	62.871	Jaculus_jaculus
ENSCSEG00000004958	cmss1	69	68.966	ENSKMAG00000002390	cmss1	82	68.966	Kryptolebias_marmoratus
ENSCSEG00000004958	cmss1	91	62.313	ENSLBEG00000006298	cmss1	98	61.887	Labrus_bergylta
ENSCSEG00000004958	cmss1	69	62.871	ENSLACG00000009293	CMSS1	88	62.871	Latimeria_chalumnae
ENSCSEG00000004958	cmss1	100	56.463	ENSLOCG00000009391	cmss1	100	57.143	Lepisosteus_oculatus
ENSCSEG00000004958	cmss1	68	61.500	ENSLAFG00000017509	CMSS1	89	61.881	Loxodonta_africana
ENSCSEG00000004958	cmss1	100	50.658	ENSMFAG00000045006	CMSS1	100	50.505	Macaca_fascicularis
ENSCSEG00000004958	cmss1	100	50.329	ENSMMUG00000002939	CMSS1	100	50.168	Macaca_mulatta
ENSCSEG00000004958	cmss1	100	50.658	ENSMNEG00000031315	CMSS1	100	50.505	Macaca_nemestrina
ENSCSEG00000004958	cmss1	100	50.658	ENSMLEG00000033660	CMSS1	100	50.505	Mandrillus_leucophaeus
ENSCSEG00000004958	cmss1	100	71.622	ENSMAMG00000017176	cmss1	100	72.635	Mastacembelus_armatus
ENSCSEG00000004958	cmss1	100	69.799	ENSMZEG00005021886	cmss1	100	68.456	Maylandia_zebra
ENSCSEG00000004958	cmss1	69	67.822	ENSMGAG00000014360	CMSS1	89	67.822	Meleagris_gallopavo
ENSCSEG00000004958	cmss1	100	36.304	ENSMAUG00000020609	Cmss1	100	36.120	Mesocricetus_auratus
ENSCSEG00000004958	cmss1	100	50.825	ENSMICG00000048977	CMSS1	100	49.495	Microcebus_murinus
ENSCSEG00000004958	cmss1	100	50.676	ENSMOCG00000021937	Cmss1	100	49.832	Microtus_ochrogaster
ENSCSEG00000004958	cmss1	74	67.932	ENSMMOG00000019794	cmss1	84	75.369	Mola_mola
ENSCSEG00000004958	cmss1	69	63.861	ENSMODG00000002275	CMSS1	76	63.861	Monodelphis_domestica
ENSCSEG00000004958	cmss1	100	71.429	ENSMALG00000004250	cmss1	100	70.408	Monopterus_albus
ENSCSEG00000004958	cmss1	100	52.027	MGP_CAROLIEiJ_G0020824	Cmss1	100	50.340	Mus_caroli
ENSCSEG00000004958	cmss1	100	51.689	ENSMUSG00000022748	Cmss1	100	50.000	Mus_musculus
ENSCSEG00000004958	cmss1	100	51.351	MGP_PahariEiJ_G0016524	Cmss1	100	49.660	Mus_pahari
ENSCSEG00000004958	cmss1	100	51.014	MGP_SPRETEiJ_G0021724	Cmss1	100	49.320	Mus_spretus
ENSCSEG00000004958	cmss1	68	62.312	ENSMPUG00000011324	CMSS1	78	62.687	Mustela_putorius_furo
ENSCSEG00000004958	cmss1	68	62.376	ENSMLUG00000001131	CMSS1	85	60.088	Myotis_lucifugus
ENSCSEG00000004958	cmss1	100	50.680	ENSNGAG00000020316	Cmss1	100	49.832	Nannospalax_galili
ENSCSEG00000004958	cmss1	100	68.121	ENSNBRG00000003095	cmss1	100	70.470	Neolamprologus_brichardi
ENSCSEG00000004958	cmss1	100	51.316	ENSNLEG00000034172	CMSS1	100	50.505	Nomascus_leucogenys
ENSCSEG00000004958	cmss1	69	52.475	ENSMEUG00000014505	CMSS1	89	52.475	Notamacropus_eugenii
ENSCSEG00000004958	cmss1	100	50.495	ENSOPRG00000002986	CMSS1	100	48.822	Ochotona_princeps
ENSCSEG00000004958	cmss1	100	52.703	ENSODEG00000005226	-	100	51.852	Octodon_degus
ENSCSEG00000004958	cmss1	100	50.000	ENSODEG00000003558	-	75	61.386	Octodon_degus
ENSCSEG00000004958	cmss1	100	42.177	ENSODEG00000009446	-	100	42.177	Octodon_degus
ENSCSEG00000004958	cmss1	100	44.932	ENSODEG00000001853	-	100	43.771	Octodon_degus
ENSCSEG00000004958	cmss1	90	71.970	ENSONIG00000006678	cmss1	99	72.727	Oreochromis_niloticus
ENSCSEG00000004958	cmss1	78	59.130	ENSOANG00000007529	CMSS1	87	62.871	Ornithorhynchus_anatinus
ENSCSEG00000004958	cmss1	69	61.881	ENSOCUG00000025366	CMSS1	73	61.881	Oryctolagus_cuniculus
ENSCSEG00000004958	cmss1	100	67.347	ENSORLG00000020340	cmss1	100	67.347	Oryzias_latipes
ENSCSEG00000004958	cmss1	72	66.667	ENSORLG00020012235	cmss1	86	68.473	Oryzias_latipes_hni
ENSCSEG00000004958	cmss1	69	67.980	ENSORLG00015015551	cmss1	76	67.980	Oryzias_latipes_hsok
ENSCSEG00000004958	cmss1	100	69.831	ENSOMEG00000012555	cmss1	100	68.475	Oryzias_melastigma
ENSCSEG00000004958	cmss1	69	62.871	ENSOGAG00000002045	CMSS1	89	62.871	Otolemur_garnettii
ENSCSEG00000004958	cmss1	69	61.576	ENSOARG00000017899	CMSS1	70	61.576	Ovis_aries
ENSCSEG00000004958	cmss1	100	50.168	ENSPPAG00000038515	CMSS1	74	62.376	Pan_paniscus
ENSCSEG00000004958	cmss1	100	52.721	ENSPPRG00000016767	CMSS1	100	51.852	Panthera_pardus
ENSCSEG00000004958	cmss1	100	52.721	ENSPTIG00000018274	CMSS1	100	51.515	Panthera_tigris_altaica
ENSCSEG00000004958	cmss1	100	50.820	ENSPTRG00000015157	CMSS1	100	50.505	Pan_troglodytes
ENSCSEG00000004958	cmss1	69	62.871	ENSPANG00000019980	CMSS1	80	62.871	Papio_anubis
ENSCSEG00000004958	cmss1	95	59.712	ENSPKIG00000012609	cmss1	96	61.742	Paramormyrops_kingsleyae
ENSCSEG00000004958	cmss1	69	67.327	ENSPSIG00000003849	CMSS1	88	67.327	Pelodiscus_sinensis
ENSCSEG00000004958	cmss1	69	75.980	ENSPMGG00000010286	cmss1	88	75.980	Periophthalmus_magnuspinnatus
ENSCSEG00000004958	cmss1	100	50.492	ENSPEMG00000016384	Cmss1	100	49.338	Peromyscus_maniculatus_bairdii
ENSCSEG00000004958	cmss1	69	52.941	ENSPMAG00000001146	cmss1	99	53.202	Petromyzon_marinus
ENSCSEG00000004958	cmss1	69	63.861	ENSPCIG00000015656	CMSS1	77	63.861	Phascolarctos_cinereus
ENSCSEG00000004958	cmss1	100	69.048	ENSPFOG00000016849	cmss1	100	67.687	Poecilia_formosa
ENSCSEG00000004958	cmss1	100	68.707	ENSPLAG00000008323	cmss1	100	67.347	Poecilia_latipinna
ENSCSEG00000004958	cmss1	100	69.388	ENSPMEG00000021020	cmss1	100	68.707	Poecilia_mexicana
ENSCSEG00000004958	cmss1	90	68.561	ENSPREG00000007618	cmss1	89	68.561	Poecilia_reticulata
ENSCSEG00000004958	cmss1	100	50.987	ENSPPYG00000013606	CMSS1	100	50.168	Pongo_abelii
ENSCSEG00000004958	cmss1	100	50.825	ENSPCOG00000020035	CMSS1	100	50.502	Propithecus_coquereli
ENSCSEG00000004958	cmss1	100	43.421	ENSPVAG00000017031	CMSS1	100	42.761	Pteropus_vampyrus
ENSCSEG00000004958	cmss1	91	70.221	ENSPNYG00000013428	cmss1	97	68.750	Pundamilia_nyererei
ENSCSEG00000004958	cmss1	100	57.333	ENSPNAG00000007912	cmss1	100	56.711	Pygocentrus_nattereri
ENSCSEG00000004958	cmss1	69	62.376	ENSRNOG00000027888	Cmss1	79	62.376	Rattus_norvegicus
ENSCSEG00000004958	cmss1	100	50.671	ENSRBIG00000037931	CMSS1	100	50.505	Rhinopithecus_bieti
ENSCSEG00000004958	cmss1	100	50.671	ENSRROG00000042910	CMSS1	100	50.505	Rhinopithecus_roxellana
ENSCSEG00000004958	cmss1	97	51.049	ENSSBOG00000030980	CMSS1	77	61.386	Saimiri_boliviensis_boliviensis
ENSCSEG00000004958	cmss1	69	64.851	ENSSHAG00000009321	CMSS1	80	64.851	Sarcophilus_harrisii
ENSCSEG00000004958	cmss1	100	58.667	ENSSFOG00015001509	cmss1	100	60.544	Scleropages_formosus
ENSCSEG00000004958	cmss1	100	76.531	ENSSMAG00000001653	cmss1	100	76.531	Scophthalmus_maximus
ENSCSEG00000004958	cmss1	100	75.170	ENSSDUG00000007719	cmss1	100	75.510	Seriola_dumerili
ENSCSEG00000004958	cmss1	90	70.849	ENSSLDG00000012300	cmss1	85	79.227	Seriola_lalandi_dorsalis
ENSCSEG00000004958	cmss1	100	41.156	ENSSARG00000003584	CMSS1	100	39.667	Sorex_araneus
ENSCSEG00000004958	cmss1	69	62.376	ENSSPUG00000003865	CMSS1	89	62.376	Sphenodon_punctatus
ENSCSEG00000004958	cmss1	95	69.424	ENSSPAG00000019182	cmss1	78	68.182	Stegastes_partitus
ENSCSEG00000004958	cmss1	100	50.658	ENSSSCG00000011970	CMSS1	100	50.168	Sus_scrofa
ENSCSEG00000004958	cmss1	69	65.347	ENSTGUG00000013635	CMSS1	88	65.347	Taeniopygia_guttata
ENSCSEG00000004958	cmss1	100	64.626	ENSTRUG00000015265	cmss1	100	67.347	Takifugu_rubripes
ENSCSEG00000004958	cmss1	69	67.488	ENSTNIG00000002880	cmss1	74	67.488	Tetraodon_nigroviridis
ENSCSEG00000004958	cmss1	69	42.574	ENSTBEG00000016722	CMSS1	72	42.574	Tupaia_belangeri
ENSCSEG00000004958	cmss1	100	50.340	ENSTTRG00000001562	CMSS1	100	48.822	Tursiops_truncatus
ENSCSEG00000004958	cmss1	69	63.366	ENSUAMG00000024209	CMSS1	91	63.366	Ursus_americanus
ENSCSEG00000004958	cmss1	69	62.871	ENSUMAG00000001983	CMSS1	78	62.871	Ursus_maritimus
ENSCSEG00000004958	cmss1	54	61.250	ENSVPAG00000000263	CMSS1	57	61.250	Vicugna_pacos
ENSCSEG00000004958	cmss1	69	62.871	ENSVVUG00000007776	-	80	62.871	Vulpes_vulpes
ENSCSEG00000004958	cmss1	68	63.500	ENSVVUG00000021647	-	82	63.861	Vulpes_vulpes
ENSCSEG00000004958	cmss1	100	51.361	ENSXETG00000011858	cmss1	100	49.338	Xenopus_tropicalis
ENSCSEG00000004958	cmss1	94	67.148	ENSXCOG00000018724	cmss1	89	67.424	Xiphophorus_couchianus
ENSCSEG00000004958	cmss1	91	67.286	ENSXMAG00000011243	cmss1	98	67.424	Xiphophorus_maculatus