EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004982 (Gene tree)
Gene ID: 103386147
Gene Symbol: camk1b
Alias: -
Full Name: calcium/calmodulin-dependent protein kinase type 1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 24658 bases
Position: chr11:6548212-6572869
Accession: 103386147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007737	RIO1	PF01163.22	0.00017	1	1
ENSCSEP00000007746	RIO1	PF01163.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007818	-	1810	XM_008320286	ENSCSEP00000007737	354 (aa)	XP_008318508	-
ENSCSET00000007827	-	1071	-	ENSCSEP00000007746	356 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000004982's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04020	Calcium signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004982	camk1b	73	40.000	ENSCSEG00000009748	phkg1a	69	40.000
ENSCSEG00000004982	camk1b	87	36.050	ENSCSEG00000002398	dapk2b	87	36.050
ENSCSEG00000004982	camk1b	63	32.906	ENSCSEG00000009503	mapk12a	62	32.906
ENSCSEG00000004982	camk1b	75	41.697	ENSCSEG00000014457	-	58	41.697
ENSCSEG00000004982	camk1b	89	64.557	ENSCSEG00000014851	camk1gb	65	64.557
ENSCSEG00000004982	camk1b	75	34.962	ENSCSEG00000015452	rps6ka4	68	34.962
ENSCSEG00000004982	camk1b	56	31.556	ENSCSEG00000000806	uhmk1	54	30.041
ENSCSEG00000004982	camk1b	93	73.112	ENSCSEG00000018668	camk1da	90	73.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004982	camk1b	98	91.643	ENSELUG00000008588	camk1b	89	91.643	Esox_lucius
ENSCSEG00000004982	camk1b	69	94.309	ENSGMOG00000001841	-	100	94.309	Gadus_morhua
ENSCSEG00000004982	camk1b	97	87.172	ENSGMOG00000016883	camk1a	100	87.172	Gadus_morhua
ENSCSEG00000004982	camk1b	98	89.943	ENSPNAG00000002527	camk1b	86	89.943	Pygocentrus_nattereri
ENSCSEG00000004982	camk1b	95	89.412	ENSSFOG00015021178	camk1a	92	89.412	Scleropages_formosus
ENSCSEG00000004982	camk1b	98	90.778	ENSSFOG00015019005	camk1	91	92.476	Scleropages_formosus
ENSCSEG00000004982	camk1b	99	82.500	ENSXETG00000023672	camk1	94	82.500	Xenopus_tropicalis