EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000005009 (Gene tree)
Gene ID: 103386143
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4012 bases
Position: chr11:6588346-6592357
Accession: 103386143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007785	GN3L_Grn1	PF08701.11	3.9e-23	1	1
ENSCSEP00000007781	GN3L_Grn1	PF08701.11	4e-23	1	1
ENSCSEP00000007781	MMR_HSR1	PF01926.23	2e-14	1	1
ENSCSEP00000007785	MMR_HSR1	PF01926.23	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007866	-	1644	-	ENSCSEP00000007785	547 (aa)	-	-
ENSCSET00000007862	-	1611	XM_008320282	ENSCSEP00000007781	536 (aa)	XP_008318504	UPI0004970386

Gene Model

Click here to download ENSCSEG00000005009's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000005009	gnl3	82	39.514	ENSCSEG00000011209	gnl3l	81	39.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005009	gnl3	100	44.894	ENSG00000163938	GNL3	99	57.042	Homo_sapiens
ENSCSEG00000005009	gnl3	100	68.345	ENSAPOG00000004048	gnl3	99	68.345	Acanthochromis_polyacanthus
ENSCSEG00000005009	gnl3	88	45.214	ENSAMEG00000008456	GNL3	86	45.214	Ailuropoda_melanoleuca
ENSCSEG00000005009	gnl3	100	63.849	ENSACIG00000000545	gnl3	99	63.849	Amphilophus_citrinellus
ENSCSEG00000005009	gnl3	100	68.705	ENSAOCG00000012879	gnl3	99	68.705	Amphiprion_ocellaris
ENSCSEG00000005009	gnl3	100	68.165	ENSAPEG00000006146	gnl3	99	68.165	Amphiprion_percula
ENSCSEG00000005009	gnl3	100	69.245	ENSATEG00000024242	gnl3	99	69.424	Anabas_testudineus
ENSCSEG00000005009	gnl3	83	47.300	ENSAPLG00000005171	GNL3	99	43.358	Anas_platyrhynchos
ENSCSEG00000005009	gnl3	86	51.277	ENSACAG00000007357	GNL3	85	51.681	Anolis_carolinensis
ENSCSEG00000005009	gnl3	100	44.504	ENSANAG00000033209	GNL3	99	44.504	Aotus_nancymaae
ENSCSEG00000005009	gnl3	100	64.286	ENSACLG00000007381	gnl3	99	64.469	Astatotilapia_calliptera
ENSCSEG00000005009	gnl3	100	52.910	ENSAMXG00000020880	gnl3	99	53.982	Astyanax_mexicanus
ENSCSEG00000005009	gnl3	87	48.211	ENSBTAG00000014549	GNL3	85	48.428	Bos_taurus
ENSCSEG00000005009	gnl3	100	45.213	ENSCJAG00000006864	-	99	45.213	Callithrix_jacchus
ENSCSEG00000005009	gnl3	100	45.213	ENSCJAG00000044256	-	99	45.213	Callithrix_jacchus
ENSCSEG00000005009	gnl3	88	46.778	ENSCAFG00000009004	GNL3	86	46.598	Canis_familiaris
ENSCSEG00000005009	gnl3	88	46.985	ENSCAFG00020002613	GNL3	90	47.162	Canis_lupus_dingo
ENSCSEG00000005009	gnl3	88	47.170	ENSCHIG00000022181	GNL3	86	46.985	Capra_hircus
ENSCSEG00000005009	gnl3	88	46.875	ENSTSYG00000006851	GNL3	86	47.083	Carlito_syrichta
ENSCSEG00000005009	gnl3	88	43.958	ENSCPOG00000000282	GNL3	88	43.958	Cavia_porcellus
ENSCSEG00000005009	gnl3	88	48.361	ENSCCAG00000033281	GNL3	87	48.361	Cebus_capucinus
ENSCSEG00000005009	gnl3	88	48.980	ENSCATG00000040886	GNL3	86	48.980	Cercocebus_atys
ENSCSEG00000005009	gnl3	100	42.500	ENSCLAG00000010109	-	99	42.500	Chinchilla_lanigera
ENSCSEG00000005009	gnl3	88	48.880	ENSCSAG00000013315	GNL3	86	48.880	Chlorocebus_sabaeus
ENSCSEG00000005009	gnl3	99	41.636	ENSCHOG00000002726	GNL3	95	41.818	Choloepus_hoffmanni
ENSCSEG00000005009	gnl3	64	49.714	ENSCPBG00000018330	-	96	44.931	Chrysemys_picta_bellii
ENSCSEG00000005009	gnl3	86	47.699	ENSCANG00000039969	GNL3	86	47.699	Colobus_angolensis_palliatus
ENSCSEG00000005009	gnl3	88	45.322	ENSCGRG00001020950	Gnl3	87	45.895	Cricetulus_griseus_chok1gshd
ENSCSEG00000005009	gnl3	88	45.322	ENSCGRG00000015225	Gnl3	87	45.895	Cricetulus_griseus_crigri
ENSCSEG00000005009	gnl3	100	64.065	ENSCVAG00000010679	gnl3	99	64.065	Cyprinodon_variegatus
ENSCSEG00000005009	gnl3	100	52.941	ENSDARG00000006219	gnl3	99	54.107	Danio_rerio
ENSCSEG00000005009	gnl3	96	44.023	ENSDNOG00000001037	GNL3	93	43.879	Dasypus_novemcinctus
ENSCSEG00000005009	gnl3	88	45.474	ENSDORG00000000674	Gnl3	89	45.816	Dipodomys_ordii
ENSCSEG00000005009	gnl3	77	77.465	ENSETEG00000016534	-	76	77.465	Echinops_telfairi
ENSCSEG00000005009	gnl3	100	42.218	ENSEASG00005014636	GNL3	99	42.218	Equus_asinus_asinus
ENSCSEG00000005009	gnl3	100	42.780	ENSECAG00000014850	GNL3	99	42.780	Equus_caballus
ENSCSEG00000005009	gnl3	87	45.263	ENSEEUG00000004427	GNL3	86	45.474	Erinaceus_europaeus
ENSCSEG00000005009	gnl3	100	59.893	ENSELUG00000008767	gnl3	99	59.893	Esox_lucius
ENSCSEG00000005009	gnl3	88	45.549	ENSFCAG00000015719	GNL3	86	45.194	Felis_catus
ENSCSEG00000005009	gnl3	99	45.601	ENSFALG00000008957	GNL3	99	46.416	Ficedula_albicollis
ENSCSEG00000005009	gnl3	100	42.857	ENSFDAG00000020679	GNL3	99	43.273	Fukomys_damarensis
ENSCSEG00000005009	gnl3	100	61.664	ENSFHEG00000020897	gnl3	99	63.043	Fundulus_heteroclitus
ENSCSEG00000005009	gnl3	99	56.937	ENSGMOG00000001745	gnl3	99	56.937	Gadus_morhua
ENSCSEG00000005009	gnl3	86	49.474	ENSGALG00000001613	GNL3	84	48.967	Gallus_gallus
ENSCSEG00000005009	gnl3	99	53.526	ENSGAFG00000007184	gnl3	99	53.707	Gambusia_affinis
ENSCSEG00000005009	gnl3	100	62.679	ENSGACG00000000309	gnl3	99	64.413	Gasterosteus_aculeatus
ENSCSEG00000005009	gnl3	78	43.459	ENSGAGG00000021579	-	99	44.295	Gopherus_agassizii
ENSCSEG00000005009	gnl3	88	48.367	ENSGGOG00000011444	GNL3	86	48.367	Gorilla_gorilla
ENSCSEG00000005009	gnl3	100	66.426	ENSHBUG00000001340	gnl3	99	66.787	Haplochromis_burtoni
ENSCSEG00000005009	gnl3	88	45.188	ENSHGLG00000018299	GNL3	86	44.835	Heterocephalus_glaber_female
ENSCSEG00000005009	gnl3	99	58.951	ENSHCOG00000009446	gnl3	99	59.313	Hippocampus_comes
ENSCSEG00000005009	gnl3	87	54.526	ENSIPUG00000023677	gnl3	99	49.725	Ictalurus_punctatus
ENSCSEG00000005009	gnl3	88	45.868	ENSSTOG00000000356	GNL3	86	45.868	Ictidomys_tridecemlineatus
ENSCSEG00000005009	gnl3	88	46.555	ENSJJAG00000021993	Gnl3	88	46.555	Jaculus_jaculus
ENSCSEG00000005009	gnl3	100	64.209	ENSKMAG00000005965	gnl3	99	64.209	Kryptolebias_marmoratus
ENSCSEG00000005009	gnl3	100	67.391	ENSLBEG00000011394	gnl3	99	67.391	Labrus_bergylta
ENSCSEG00000005009	gnl3	86	52.966	ENSLACG00000001259	GNL3	100	47.578	Latimeria_chalumnae
ENSCSEG00000005009	gnl3	87	58.471	ENSLOCG00000010542	gnl3	85	58.884	Lepisosteus_oculatus
ENSCSEG00000005009	gnl3	86	44.540	ENSLAFG00000016056	GNL3	86	44.259	Loxodonta_africana
ENSCSEG00000005009	gnl3	88	49.184	ENSMFAG00000000613	GNL3	86	49.184	Macaca_fascicularis
ENSCSEG00000005009	gnl3	86	47.908	ENSMMUG00000012511	GNL3	86	47.908	Macaca_mulatta
ENSCSEG00000005009	gnl3	86	48.117	ENSMNEG00000041979	GNL3	86	48.117	Macaca_nemestrina
ENSCSEG00000005009	gnl3	88	49.184	ENSMLEG00000027696	GNL3	86	49.184	Mandrillus_leucophaeus
ENSCSEG00000005009	gnl3	100	69.495	ENSMAMG00000008904	gnl3	99	69.495	Mastacembelus_armatus
ENSCSEG00000005009	gnl3	87	63.750	ENSMZEG00005014957	-	96	63.692	Maylandia_zebra
ENSCSEG00000005009	gnl3	100	66.787	ENSMZEG00005014857	gnl3	99	66.787	Maylandia_zebra
ENSCSEG00000005009	gnl3	85	40.211	ENSMGAG00000000848	GNL3	81	40.083	Meleagris_gallopavo
ENSCSEG00000005009	gnl3	99	43.199	ENSMAUG00000020178	Gnl3	99	43.407	Mesocricetus_auratus
ENSCSEG00000005009	gnl3	99	41.459	ENSMICG00000016373	GNL3	99	41.637	Microcebus_murinus
ENSCSEG00000005009	gnl3	87	46.488	ENSMOCG00000018437	Gnl3	87	46.488	Microtus_ochrogaster
ENSCSEG00000005009	gnl3	87	68.697	ENSMMOG00000002815	gnl3	94	68.763	Mola_mola
ENSCSEG00000005009	gnl3	88	47.059	ENSMODG00000011257	GNL3	89	46.185	Monodelphis_domestica
ENSCSEG00000005009	gnl3	96	62.571	ENSMALG00000021043	gnl3	94	71.429	Monopterus_albus
ENSCSEG00000005009	gnl3	98	43.470	MGP_CAROLIEiJ_G0019063	Gnl3	96	43.253	Mus_caroli
ENSCSEG00000005009	gnl3	98	43.657	ENSMUSG00000042354	Gnl3	100	55.405	Mus_musculus
ENSCSEG00000005009	gnl3	98	43.340	MGP_PahariEiJ_G0030080	Gnl3	93	43.340	Mus_pahari
ENSCSEG00000005009	gnl3	100	43.580	MGP_SPRETEiJ_G0019948	Gnl3	99	43.580	Mus_spretus
ENSCSEG00000005009	gnl3	88	44.398	ENSMPUG00000016777	GNL3	87	44.606	Mustela_putorius_furo
ENSCSEG00000005009	gnl3	96	43.750	ENSMLUG00000000728	GNL3	99	42.857	Myotis_lucifugus
ENSCSEG00000005009	gnl3	98	42.857	ENSNGAG00000017202	Gnl3	95	42.857	Nannospalax_galili
ENSCSEG00000005009	gnl3	87	65.417	ENSNBRG00000013161	gnl3	99	65.041	Neolamprologus_brichardi
ENSCSEG00000005009	gnl3	88	48.571	ENSNLEG00000007173	GNL3	86	48.571	Nomascus_leucogenys
ENSCSEG00000005009	gnl3	71	39.221	ENSMEUG00000011502	-	87	39.075	Notamacropus_eugenii
ENSCSEG00000005009	gnl3	66	43.056	ENSOPRG00000009356	GNL3	81	43.251	Ochotona_princeps
ENSCSEG00000005009	gnl3	100	43.540	ENSODEG00000009492	GNL3	99	43.540	Octodon_degus
ENSCSEG00000005009	gnl3	100	67.748	ENSONIG00000019335	gnl3	99	67.748	Oreochromis_niloticus
ENSCSEG00000005009	gnl3	100	44.956	ENSOANG00000013437	GNL3	86	48.866	Ornithorhynchus_anatinus
ENSCSEG00000005009	gnl3	86	46.947	ENSOCUG00000009841	GNL3	85	47.257	Oryctolagus_cuniculus
ENSCSEG00000005009	gnl3	100	64.845	ENSORLG00000016030	gnl3	99	66.120	Oryzias_latipes
ENSCSEG00000005009	gnl3	100	65.027	ENSORLG00020014358	gnl3	99	66.302	Oryzias_latipes_hni
ENSCSEG00000005009	gnl3	100	65.027	ENSORLG00015009489	gnl3	99	66.302	Oryzias_latipes_hsok
ENSCSEG00000005009	gnl3	100	65.938	ENSOMEG00000005462	gnl3	99	65.938	Oryzias_melastigma
ENSCSEG00000005009	gnl3	88	46.061	ENSOGAG00000004101	GNL3	86	46.061	Otolemur_garnettii
ENSCSEG00000005009	gnl3	88	46.998	ENSOARG00000002470	GNL3	86	47.629	Ovis_aries
ENSCSEG00000005009	gnl3	88	48.571	ENSPPAG00000019253	GNL3	86	48.571	Pan_paniscus
ENSCSEG00000005009	gnl3	88	45.567	ENSPPRG00000009550	GNL3	86	45.214	Panthera_pardus
ENSCSEG00000005009	gnl3	88	45.773	ENSPTIG00000009356	GNL3	86	45.418	Panthera_tigris_altaica
ENSCSEG00000005009	gnl3	88	48.571	ENSPTRG00000015009	GNL3	86	48.571	Pan_troglodytes
ENSCSEG00000005009	gnl3	88	47.755	ENSPANG00000016579	GNL3	86	47.755	Papio_anubis
ENSCSEG00000005009	gnl3	100	57.762	ENSPKIG00000024295	gnl3	99	58.244	Paramormyrops_kingsleyae
ENSCSEG00000005009	gnl3	98	47.016	ENSPSIG00000011486	GNL3	99	47.834	Pelodiscus_sinensis
ENSCSEG00000005009	gnl3	99	61.007	ENSPMGG00000008210	gnl3	99	60.401	Periophthalmus_magnuspinnatus
ENSCSEG00000005009	gnl3	99	42.518	ENSPEMG00000017577	Gnl3	99	42.883	Peromyscus_maniculatus_bairdii
ENSCSEG00000005009	gnl3	86	46.121	ENSPCIG00000018642	GNL3	84	45.073	Phascolarctos_cinereus
ENSCSEG00000005009	gnl3	100	59.747	ENSPFOG00000017601	gnl3	91	67.975	Poecilia_formosa
ENSCSEG00000005009	gnl3	100	63.587	ENSPLAG00000016968	gnl3	99	63.587	Poecilia_latipinna
ENSCSEG00000005009	gnl3	99	60.589	ENSPMEG00000018775	gnl3	99	60.662	Poecilia_mexicana
ENSCSEG00000005009	gnl3	99	59.273	ENSPREG00000002909	gnl3	99	59.347	Poecilia_reticulata
ENSCSEG00000005009	gnl3	88	48.776	ENSPPYG00000013800	GNL3	86	48.776	Pongo_abelii
ENSCSEG00000005009	gnl3	80	46.325	ENSPCAG00000002006	GNL3	80	46.325	Procavia_capensis
ENSCSEG00000005009	gnl3	99	42.707	ENSPCOG00000026637	GNL3	99	42.606	Propithecus_coquereli
ENSCSEG00000005009	gnl3	88	45.868	ENSPVAG00000012586	GNL3	86	46.074	Pteropus_vampyrus
ENSCSEG00000005009	gnl3	92	61.719	ENSPNYG00000005130	gnl3	99	61.719	Pundamilia_nyererei
ENSCSEG00000005009	gnl3	100	51.146	ENSPNAG00000013096	gnl3	99	51.658	Pygocentrus_nattereri
ENSCSEG00000005009	gnl3	99	43.284	ENSRNOG00000028461	Gnl3	96	43.762	Rattus_norvegicus
ENSCSEG00000005009	gnl3	88	48.776	ENSRBIG00000031778	GNL3	86	48.776	Rhinopithecus_bieti
ENSCSEG00000005009	gnl3	88	48.776	ENSRROG00000030086	GNL3	86	48.776	Rhinopithecus_roxellana
ENSCSEG00000005009	gnl3	99	45.098	ENSSBOG00000019990	GNL3	99	44.858	Saimiri_boliviensis_boliviensis
ENSCSEG00000005009	gnl3	86	45.106	ENSSHAG00000006141	GNL3	89	44.467	Sarcophilus_harrisii
ENSCSEG00000005009	gnl3	100	57.810	ENSSFOG00015021228	gnl3	99	58.169	Scleropages_formosus
ENSCSEG00000005009	gnl3	100	68.921	ENSSMAG00000006662	gnl3	99	68.921	Scophthalmus_maximus
ENSCSEG00000005009	gnl3	100	70.471	ENSSDUG00000000972	gnl3	99	70.471	Seriola_dumerili
ENSCSEG00000005009	gnl3	100	71.014	ENSSLDG00000008692	gnl3	92	71.014	Seriola_lalandi_dorsalis
ENSCSEG00000005009	gnl3	87	45.661	ENSSARG00000002226	GNL3	99	42.987	Sorex_araneus
ENSCSEG00000005009	gnl3	100	46.046	ENSSPUG00000003582	GNL3	99	47.100	Sphenodon_punctatus
ENSCSEG00000005009	gnl3	100	69.009	ENSSPAG00000020180	gnl3	99	69.009	Stegastes_partitus
ENSCSEG00000005009	gnl3	87	46.639	ENSSSCG00000011449	GNL3	85	47.059	Sus_scrofa
ENSCSEG00000005009	gnl3	85	50.431	ENSTGUG00000005774	GNL3	99	45.683	Taeniopygia_guttata
ENSCSEG00000005009	gnl3	100	58.590	ENSTRUG00000005552	gnl3	99	58.590	Takifugu_rubripes
ENSCSEG00000005009	gnl3	100	62.206	ENSTNIG00000007263	gnl3	99	62.050	Tetraodon_nigroviridis
ENSCSEG00000005009	gnl3	84	43.844	ENSTBEG00000017518	GNL3	85	43.991	Tupaia_belangeri
ENSCSEG00000005009	gnl3	59	37.812	ENSTTRG00000008574	-	93	37.654	Tursiops_truncatus
ENSCSEG00000005009	gnl3	88	45.418	ENSUAMG00000012347	GNL3	89	45.621	Ursus_americanus
ENSCSEG00000005009	gnl3	88	45.418	ENSUMAG00000021001	GNL3	86	45.621	Ursus_maritimus
ENSCSEG00000005009	gnl3	87	45.607	ENSVVUG00000024536	-	100	52.055	Vulpes_vulpes
ENSCSEG00000005009	gnl3	87	62.553	ENSXCOG00000018425	gnl3	99	66.161	Xiphophorus_couchianus
ENSCSEG00000005009	gnl3	100	63.587	ENSXMAG00000022565	gnl3	99	63.587	Xiphophorus_maculatus