EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005121 (Gene tree)
Gene ID: 103383720
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2777 bases
Position: chr9:8123547-8126323
Accession: 103383720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007963	RNA_pol_I_A49	PF06870.12	5.5e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008049	-	1209	XM_008316977	ENSCSEP00000007963	402 (aa)	XP_008315199	-

Gene Model

Click here to download ENSCSEG00000005121's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005121	polr1e	98	42.092	ENSG00000137054	POLR1E	97	42.092	Homo_sapiens
ENSCSEG00000005121	polr1e	99	67.568	ENSAPOG00000012452	polr1e	99	67.568	Acanthochromis_polyacanthus
ENSCSEG00000005121	polr1e	96	39.456	ENSAMEG00000010193	POLR1E	91	39.456	Ailuropoda_melanoleuca
ENSCSEG00000005121	polr1e	95	66.324	ENSACIG00000009884	polr1e	99	66.324	Amphilophus_citrinellus
ENSCSEG00000005121	polr1e	99	69.880	ENSAOCG00000005665	polr1e	99	69.880	Amphiprion_ocellaris
ENSCSEG00000005121	polr1e	99	70.361	ENSAPEG00000020581	polr1e	99	70.361	Amphiprion_percula
ENSCSEG00000005121	polr1e	99	71.807	ENSATEG00000020609	polr1e	99	71.807	Anabas_testudineus
ENSCSEG00000005121	polr1e	81	38.642	ENSAPLG00000010340	POLR1E	99	38.642	Anas_platyrhynchos
ENSCSEG00000005121	polr1e	99	42.543	ENSANAG00000038046	POLR1E	97	42.543	Aotus_nancymaae
ENSCSEG00000005121	polr1e	99	68.434	ENSACLG00000013685	polr1e	99	68.434	Astatotilapia_calliptera
ENSCSEG00000005121	polr1e	100	54.964	ENSAMXG00000018181	polr1e	100	54.964	Astyanax_mexicanus
ENSCSEG00000005121	polr1e	96	43.544	ENSBTAG00000012243	POLR1E	94	43.544	Bos_taurus
ENSCSEG00000005121	polr1e	95	42.746	ENSCJAG00000010512	POLR1E	90	44.353	Callithrix_jacchus
ENSCSEG00000005121	polr1e	96	43.038	ENSCAFG00000002377	POLR1E	94	43.038	Canis_familiaris
ENSCSEG00000005121	polr1e	96	42.785	ENSCAFG00020017851	POLR1E	94	42.785	Canis_lupus_dingo
ENSCSEG00000005121	polr1e	96	44.304	ENSCHIG00000019479	POLR1E	94	44.304	Capra_hircus
ENSCSEG00000005121	polr1e	96	42.317	ENSTSYG00000002075	POLR1E	94	42.317	Carlito_syrichta
ENSCSEG00000005121	polr1e	70	42.230	ENSCAPG00000015653	POLR1E	99	42.230	Cavia_aperea
ENSCSEG00000005121	polr1e	96	43.392	ENSCPOG00000009965	POLR1E	94	43.392	Cavia_porcellus
ENSCSEG00000005121	polr1e	99	40.049	ENSCCAG00000029460	POLR1E	97	40.049	Cebus_capucinus
ENSCSEG00000005121	polr1e	98	42.336	ENSCATG00000031732	POLR1E	96	44.554	Cercocebus_atys
ENSCSEG00000005121	polr1e	82	46.471	ENSCLAG00000012701	POLR1E	89	46.471	Chinchilla_lanigera
ENSCSEG00000005121	polr1e	98	42.336	ENSCSAG00000010782	POLR1E	97	42.336	Chlorocebus_sabaeus
ENSCSEG00000005121	polr1e	96	37.722	ENSCHOG00000013024	POLR1E	82	37.722	Choloepus_hoffmanni
ENSCSEG00000005121	polr1e	99	44.231	ENSCPBG00000006923	POLR1E	99	44.471	Chrysemys_picta_bellii
ENSCSEG00000005121	polr1e	98	42.336	ENSCANG00000036112	POLR1E	96	43.810	Colobus_angolensis_palliatus
ENSCSEG00000005121	polr1e	99	41.748	ENSCGRG00001006197	Polr1e	94	41.748	Cricetulus_griseus_chok1gshd
ENSCSEG00000005121	polr1e	99	41.262	ENSCGRG00000006430	Polr1e	94	41.262	Cricetulus_griseus_crigri
ENSCSEG00000005121	polr1e	99	68.116	ENSCVAG00000019759	polr1e	99	68.116	Cyprinodon_variegatus
ENSCSEG00000005121	polr1e	97	54.863	ENSDARG00000006434	polr1e	99	54.854	Danio_rerio
ENSCSEG00000005121	polr1e	96	38.964	ENSDNOG00000010257	POLR1E	94	38.964	Dasypus_novemcinctus
ENSCSEG00000005121	polr1e	83	42.486	ENSETEG00000018204	POLR1E	96	42.775	Echinops_telfairi
ENSCSEG00000005121	polr1e	80	30.699	ENSEBUG00000010635	-	95	31.212	Eptatretus_burgeri
ENSCSEG00000005121	polr1e	96	43.577	ENSEASG00005000675	POLR1E	94	43.577	Equus_asinus_asinus
ENSCSEG00000005121	polr1e	96	43.577	ENSECAG00000014669	POLR1E	94	43.577	Equus_caballus
ENSCSEG00000005121	polr1e	95	37.405	ENSEEUG00000011928	POLR1E	83	37.405	Erinaceus_europaeus
ENSCSEG00000005121	polr1e	99	61.836	ENSELUG00000008150	polr1e	99	61.836	Esox_lucius
ENSCSEG00000005121	polr1e	96	43.544	ENSFCAG00000013081	POLR1E	94	43.544	Felis_catus
ENSCSEG00000005121	polr1e	96	43.687	ENSFALG00000012950	POLR1E	98	43.687	Ficedula_albicollis
ENSCSEG00000005121	polr1e	96	43.890	ENSFDAG00000016917	POLR1E	94	43.890	Fukomys_damarensis
ENSCSEG00000005121	polr1e	99	66.024	ENSFHEG00000009801	polr1e	99	66.024	Fundulus_heteroclitus
ENSCSEG00000005121	polr1e	100	50.831	ENSGMOG00000003336	POLR1E	100	50.831	Gadus_morhua
ENSCSEG00000005121	polr1e	99	45.673	ENSGALG00000005395	POLR1E	99	45.673	Gallus_gallus
ENSCSEG00000005121	polr1e	99	67.633	ENSGAFG00000004850	polr1e	99	67.633	Gambusia_affinis
ENSCSEG00000005121	polr1e	99	62.440	ENSGACG00000016087	polr1e	99	62.440	Gasterosteus_aculeatus
ENSCSEG00000005121	polr1e	99	39.423	ENSGAGG00000001659	POLR1E	99	39.423	Gopherus_agassizii
ENSCSEG00000005121	polr1e	98	42.092	ENSGGOG00000001882	POLR1E	96	44.554	Gorilla_gorilla
ENSCSEG00000005121	polr1e	99	68.675	ENSHBUG00000002559	polr1e	99	68.675	Haplochromis_burtoni
ENSCSEG00000005121	polr1e	98	43.510	ENSHGLG00000002036	POLR1E	97	43.510	Heterocephalus_glaber_female
ENSCSEG00000005121	polr1e	98	43.750	ENSHGLG00100012784	POLR1E	97	43.750	Heterocephalus_glaber_male
ENSCSEG00000005121	polr1e	99	65.217	ENSHCOG00000002774	polr1e	99	65.459	Hippocampus_comes
ENSCSEG00000005121	polr1e	100	51.449	ENSIPUG00000003019	polr1e	100	51.449	Ictalurus_punctatus
ENSCSEG00000005121	polr1e	95	44.304	ENSSTOG00000009810	POLR1E	93	44.304	Ictidomys_tridecemlineatus
ENSCSEG00000005121	polr1e	98	43.382	ENSJJAG00000020731	Polr1e	93	43.382	Jaculus_jaculus
ENSCSEG00000005121	polr1e	99	68.916	ENSKMAG00000000046	polr1e	99	68.916	Kryptolebias_marmoratus
ENSCSEG00000005121	polr1e	100	68.750	ENSLBEG00000003104	polr1e	99	69.952	Labrus_bergylta
ENSCSEG00000005121	polr1e	87	46.556	ENSLACG00000003416	POLR1E	99	46.556	Latimeria_chalumnae
ENSCSEG00000005121	polr1e	99	48.434	ENSLOCG00000012859	polr1e	98	48.434	Lepisosteus_oculatus
ENSCSEG00000005121	polr1e	96	44.304	ENSLAFG00000012831	POLR1E	93	44.304	Loxodonta_africana
ENSCSEG00000005121	polr1e	98	42.092	ENSMFAG00000045465	POLR1E	96	44.554	Macaca_fascicularis
ENSCSEG00000005121	polr1e	98	42.336	ENSMMUG00000017892	POLR1E	96	44.554	Macaca_mulatta
ENSCSEG00000005121	polr1e	98	39.568	ENSMNEG00000040283	POLR1E	97	39.568	Macaca_nemestrina
ENSCSEG00000005121	polr1e	98	42.336	ENSMLEG00000031135	POLR1E	96	44.554	Mandrillus_leucophaeus
ENSCSEG00000005121	polr1e	100	71.154	ENSMAMG00000001260	polr1e	99	71.154	Mastacembelus_armatus
ENSCSEG00000005121	polr1e	99	68.675	ENSMZEG00005021536	polr1e	99	68.675	Maylandia_zebra
ENSCSEG00000005121	polr1e	99	42.476	ENSMAUG00000021044	Polr1e	94	42.476	Mesocricetus_auratus
ENSCSEG00000005121	polr1e	98	43.032	ENSMICG00000003673	POLR1E	97	43.032	Microcebus_murinus
ENSCSEG00000005121	polr1e	99	41.320	ENSMOCG00000012920	Polr1e	94	41.320	Microtus_ochrogaster
ENSCSEG00000005121	polr1e	99	72.019	ENSMMOG00000007391	polr1e	99	72.019	Mola_mola
ENSCSEG00000005121	polr1e	96	43.035	ENSMODG00000002884	POLR1E	98	43.035	Monodelphis_domestica
ENSCSEG00000005121	polr1e	99	70.361	ENSMALG00000002665	polr1e	99	70.361	Monopterus_albus
ENSCSEG00000005121	polr1e	96	41.117	MGP_CAROLIEiJ_G0025967	Polr1e	97	41.117	Mus_caroli
ENSCSEG00000005121	polr1e	99	41.019	ENSMUSG00000028318	Polr1e	96	41.960	Mus_musculus
ENSCSEG00000005121	polr1e	99	41.748	MGP_PahariEiJ_G0024114	Polr1e	97	42.714	Mus_pahari
ENSCSEG00000005121	polr1e	99	41.262	MGP_SPRETEiJ_G0026930	Polr1e	97	42.211	Mus_spretus
ENSCSEG00000005121	polr1e	99	37.037	ENSMPUG00000006040	POLR1E	97	36.522	Mustela_putorius_furo
ENSCSEG00000005121	polr1e	96	43.797	ENSMLUG00000012688	POLR1E	90	43.797	Myotis_lucifugus
ENSCSEG00000005121	polr1e	96	45.226	ENSNGAG00000002520	Polr1e	90	45.226	Nannospalax_galili
ENSCSEG00000005121	polr1e	99	68.916	ENSNBRG00000016822	polr1e	99	68.916	Neolamprologus_brichardi
ENSCSEG00000005121	polr1e	98	42.092	ENSNLEG00000003616	POLR1E	96	44.554	Nomascus_leucogenys
ENSCSEG00000005121	polr1e	76	48.018	ENSMEUG00000015372	-	80	48.018	Notamacropus_eugenii
ENSCSEG00000005121	polr1e	87	40.608	ENSOPRG00000014206	POLR1E	99	40.608	Ochotona_princeps
ENSCSEG00000005121	polr1e	96	44.836	ENSODEG00000014565	POLR1E	91	44.836	Octodon_degus
ENSCSEG00000005121	polr1e	99	68.434	ENSONIG00000008921	polr1e	99	68.434	Oreochromis_niloticus
ENSCSEG00000005121	polr1e	96	43.073	ENSOCUG00000024773	POLR1E	94	43.325	Oryctolagus_cuniculus
ENSCSEG00000005121	polr1e	99	64.819	ENSORLG00000005143	polr1e	99	64.819	Oryzias_latipes
ENSCSEG00000005121	polr1e	96	62.564	ENSORLG00020007271	polr1e	99	64.062	Oryzias_latipes_hni
ENSCSEG00000005121	polr1e	99	64.819	ENSORLG00015000137	polr1e	99	64.819	Oryzias_latipes_hsok
ENSCSEG00000005121	polr1e	99	65.542	ENSOMEG00000013264	polr1e	98	65.542	Oryzias_melastigma
ENSCSEG00000005121	polr1e	98	42.402	ENSOGAG00000012981	POLR1E	94	42.402	Otolemur_garnettii
ENSCSEG00000005121	polr1e	96	44.557	ENSOARG00000011465	POLR1E	90	44.557	Ovis_aries
ENSCSEG00000005121	polr1e	98	42.092	ENSPPAG00000034566	POLR1E	96	44.554	Pan_paniscus
ENSCSEG00000005121	polr1e	96	43.797	ENSPPRG00000005649	POLR1E	94	43.797	Panthera_pardus
ENSCSEG00000005121	polr1e	96	43.797	ENSPTIG00000009774	POLR1E	94	43.797	Panthera_tigris_altaica
ENSCSEG00000005121	polr1e	98	42.092	ENSPTRG00000020944	POLR1E	96	44.554	Pan_troglodytes
ENSCSEG00000005121	polr1e	98	42.336	ENSPANG00000025563	POLR1E	96	44.554	Papio_anubis
ENSCSEG00000005121	polr1e	99	52.506	ENSPKIG00000003562	polr1e	99	52.506	Paramormyrops_kingsleyae
ENSCSEG00000005121	polr1e	95	42.424	ENSPSIG00000003274	POLR1E	92	42.929	Pelodiscus_sinensis
ENSCSEG00000005121	polr1e	96	60.101	ENSPMGG00000024169	polr1e	95	60.101	Periophthalmus_magnuspinnatus
ENSCSEG00000005121	polr1e	99	41.106	ENSPEMG00000019151	-	94	41.106	Peromyscus_maniculatus_bairdii
ENSCSEG00000005121	polr1e	99	35.714	ENSPEMG00000022300	-	93	35.714	Peromyscus_maniculatus_bairdii
ENSCSEG00000005121	polr1e	99	43.029	ENSPCIG00000014798	POLR1E	99	43.029	Phascolarctos_cinereus
ENSCSEG00000005121	polr1e	99	63.409	ENSPFOG00000019627	polr1e	99	63.409	Poecilia_formosa
ENSCSEG00000005121	polr1e	99	67.150	ENSPLAG00000022679	polr1e	99	67.150	Poecilia_latipinna
ENSCSEG00000005121	polr1e	87	69.553	ENSPMEG00000022123	polr1e	93	69.553	Poecilia_mexicana
ENSCSEG00000005121	polr1e	99	65.217	ENSPREG00000009470	polr1e	99	65.217	Poecilia_reticulata
ENSCSEG00000005121	polr1e	98	42.336	ENSPPYG00000019061	POLR1E	97	42.336	Pongo_abelii
ENSCSEG00000005121	polr1e	50	39.336	ENSPCAG00000004891	POLR1E	69	39.336	Procavia_capensis
ENSCSEG00000005121	polr1e	98	42.683	ENSPCOG00000027448	POLR1E	97	42.157	Propithecus_coquereli
ENSCSEG00000005121	polr1e	96	44.304	ENSPVAG00000007940	POLR1E	83	44.557	Pteropus_vampyrus
ENSCSEG00000005121	polr1e	99	68.434	ENSPNYG00000001032	polr1e	99	68.434	Pundamilia_nyererei
ENSCSEG00000005121	polr1e	98	54.839	ENSPNAG00000006987	polr1e	97	54.839	Pygocentrus_nattereri
ENSCSEG00000005121	polr1e	99	41.505	ENSRNOG00000012664	Polr1e	94	41.505	Rattus_norvegicus
ENSCSEG00000005121	polr1e	95	43.325	ENSRBIG00000034214	POLR1E	99	43.864	Rhinopithecus_bieti
ENSCSEG00000005121	polr1e	98	42.336	ENSRROG00000031986	POLR1E	96	44.554	Rhinopithecus_roxellana
ENSCSEG00000005121	polr1e	98	42.647	ENSSBOG00000021415	POLR1E	97	42.647	Saimiri_boliviensis_boliviensis
ENSCSEG00000005121	polr1e	83	44.669	ENSSHAG00000016084	POLR1E	95	44.669	Sarcophilus_harrisii
ENSCSEG00000005121	polr1e	100	55.263	ENSSFOG00015002293	polr1e	100	55.263	Scleropages_formosus
ENSCSEG00000005121	polr1e	99	71.014	ENSSMAG00000011672	polr1e	93	71.014	Scophthalmus_maximus
ENSCSEG00000005121	polr1e	99	71.566	ENSSDUG00000022279	polr1e	99	71.566	Seriola_dumerili
ENSCSEG00000005121	polr1e	99	70.602	ENSSLDG00000024918	polr1e	99	70.602	Seriola_lalandi_dorsalis
ENSCSEG00000005121	polr1e	55	40.086	ENSSARG00000009810	-	58	40.086	Sorex_araneus
ENSCSEG00000005121	polr1e	99	43.095	ENSSPUG00000009499	POLR1E	99	43.095	Sphenodon_punctatus
ENSCSEG00000005121	polr1e	99	71.981	ENSSPAG00000021240	polr1e	99	71.981	Stegastes_partitus
ENSCSEG00000005121	polr1e	96	43.544	ENSSSCG00000005347	POLR1E	94	43.544	Sus_scrofa
ENSCSEG00000005121	polr1e	96	39.278	ENSTGUG00000007169	POLR1E	99	39.278	Taeniopygia_guttata
ENSCSEG00000005121	polr1e	100	65.632	ENSTRUG00000020779	polr1e	100	65.632	Takifugu_rubripes
ENSCSEG00000005121	polr1e	100	67.146	ENSTNIG00000017812	polr1e	100	67.146	Tetraodon_nigroviridis
ENSCSEG00000005121	polr1e	96	43.970	ENSTBEG00000013786	POLR1E	83	43.970	Tupaia_belangeri
ENSCSEG00000005121	polr1e	96	42.965	ENSTTRG00000008294	POLR1E	84	42.965	Tursiops_truncatus
ENSCSEG00000005121	polr1e	96	44.557	ENSUAMG00000012474	POLR1E	93	46.199	Ursus_americanus
ENSCSEG00000005121	polr1e	96	44.557	ENSUMAG00000011496	POLR1E	94	44.557	Ursus_maritimus
ENSCSEG00000005121	polr1e	82	40.294	ENSVPAG00000009048	POLR1E	80	40.294	Vicugna_pacos
ENSCSEG00000005121	polr1e	96	42.785	ENSVVUG00000019954	POLR1E	94	42.785	Vulpes_vulpes
ENSCSEG00000005121	polr1e	96	42.462	ENSXETG00000006533	polr1e	94	42.462	Xenopus_tropicalis
ENSCSEG00000005121	polr1e	99	64.251	ENSXCOG00000013706	polr1e	99	64.251	Xiphophorus_couchianus
ENSCSEG00000005121	polr1e	99	67.874	ENSXMAG00000012484	polr1e	99	67.874	Xiphophorus_maculatus