EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000005233 (Gene tree)
Gene ID: 103389311
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5722 bases
Position: chr1:28405036-28410757
Accession: 103389311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008177	ARS2	PF04959.13	2.7e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008262	-	2460	XM_017037136	ENSCSEP00000008177	819 (aa)	XP_016892625	-

Gene Model

Click here to download ENSCSEG00000005233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000005233	-	54	61.822	ENSCSEG00000017878	srrt	50	60.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005233	-	54	63.034	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSCSEG00000005233	-	54	65.875	ENSAPOG00000002304	srrt	55	61.905	Acanthochromis_polyacanthus
ENSCSEG00000005233	-	54	63.793	ENSAMEG00000014506	SRRT	74	61.474	Ailuropoda_melanoleuca
ENSCSEG00000005233	-	94	56.101	ENSACIG00000015795	srrt	57	64.516	Amphilophus_citrinellus
ENSCSEG00000005233	-	54	65.368	ENSAOCG00000009693	srrt	52	63.445	Amphiprion_ocellaris
ENSCSEG00000005233	-	93	76.471	ENSAOCG00000009189	-	81	92.021	Amphiprion_ocellaris
ENSCSEG00000005233	-	78	65.302	ENSAPEG00000003646	srrt	80	62.971	Amphiprion_percula
ENSCSEG00000005233	-	93	76.471	ENSAPEG00000020016	-	81	92.021	Amphiprion_percula
ENSCSEG00000005233	-	63	85.958	ENSATEG00000003652	-	99	85.958	Anabas_testudineus
ENSCSEG00000005233	-	55	60.543	ENSACAG00000001014	SRRT	54	60.996	Anolis_carolinensis
ENSCSEG00000005233	-	54	65.152	ENSACLG00000013156	srrt	50	63.368	Astatotilapia_calliptera
ENSCSEG00000005233	-	85	91.262	ENSACLG00000009423	-	82	91.262	Astatotilapia_calliptera
ENSCSEG00000005233	-	53	63.797	ENSAMXG00000016671	srrt	52	61.684	Astyanax_mexicanus
ENSCSEG00000005233	-	54	62.924	ENSBTAG00000001134	SRRT	93	52.721	Bos_taurus
ENSCSEG00000005233	-	71	34.628	WBGene00017085	E01A2.2	85	40.671	Caenorhabditis_elegans
ENSCSEG00000005233	-	98	53.613	ENSCAFG00020013358	SRRT	91	53.798	Canis_lupus_dingo
ENSCSEG00000005233	-	54	63.462	ENSCHIG00000010495	SRRT	93	52.116	Capra_hircus
ENSCSEG00000005233	-	80	63.297	ENSTSYG00000036426	SRRT	96	51.235	Carlito_syrichta
ENSCSEG00000005233	-	84	63.147	ENSCAPG00000013586	SRRT	94	56.574	Cavia_aperea
ENSCSEG00000005233	-	54	62.447	ENSCPOG00000001739	SRRT	93	53.019	Cavia_porcellus
ENSCSEG00000005233	-	96	52.588	ENSCLAG00000007568	SRRT	94	57.692	Chinchilla_lanigera
ENSCSEG00000005233	-	50	65.138	ENSCHOG00000007815	SRRT	61	65.138	Choloepus_hoffmanni
ENSCSEG00000005233	-	80	51.181	ENSCPBG00000011553	SRRT	73	56.545	Chrysemys_picta_bellii
ENSCSEG00000005233	-	100	38.154	ENSCING00000003506	-	55	48.649	Ciona_intestinalis
ENSCSEG00000005233	-	100	37.652	ENSCSAVG00000008394	-	85	53.143	Ciona_savignyi
ENSCSEG00000005233	-	72	62.368	ENSCGRG00000007292	Srrt	94	57.460	Cricetulus_griseus_crigri
ENSCSEG00000005233	-	90	71.798	ENSCVAG00000017344	-	80	82.888	Cyprinodon_variegatus
ENSCSEG00000005233	-	94	55.529	ENSCVAG00000019848	srrt	74	64.398	Cyprinodon_variegatus
ENSCSEG00000005233	-	55	62.343	ENSDARG00000017762	srrt	52	64.211	Danio_rerio
ENSCSEG00000005233	-	54	62.845	ENSDORG00000005584	Srrt	92	59.298	Dipodomys_ordii
ENSCSEG00000005233	-	100	46.758	FBgn0033062	Ars2	66	49.153	Drosophila_melanogaster
ENSCSEG00000005233	-	77	60.833	ENSETEG00000016175	SRRT	75	56.827	Echinops_telfairi
ENSCSEG00000005233	-	77	50.983	ENSEBUG00000008517	-	75	60.294	Eptatretus_burgeri
ENSCSEG00000005233	-	79	63.136	ENSEASG00005016956	SRRT	93	52.364	Equus_asinus_asinus
ENSCSEG00000005233	-	58	68.539	ENSEEUG00000009117	SRRT	70	58.982	Erinaceus_europaeus
ENSCSEG00000005233	-	85	67.024	ENSELUG00000006651	srrt	72	65.272	Esox_lucius
ENSCSEG00000005233	-	54	63.136	ENSFCAG00000006855	SRRT	93	52.427	Felis_catus
ENSCSEG00000005233	-	54	57.391	ENSFDAG00000021347	SRRT	93	55.741	Fukomys_damarensis
ENSCSEG00000005233	-	72	64.865	ENSFHEG00000002756	srrt	80	64.398	Fundulus_heteroclitus
ENSCSEG00000005233	-	56	75.105	ENSFHEG00000004105	-	96	73.629	Fundulus_heteroclitus
ENSCSEG00000005233	-	71	78.495	ENSGMOG00000018694	-	71	77.600	Gadus_morhua
ENSCSEG00000005233	-	54	60.613	ENSGMOG00000018619	srrt	51	60.390	Gadus_morhua
ENSCSEG00000005233	-	78	65.359	ENSGAFG00000005423	srrt	74	64.744	Gambusia_affinis
ENSCSEG00000005233	-	82	81.858	ENSGAFG00000020383	-	83	80.749	Gambusia_affinis
ENSCSEG00000005233	-	58	62.828	ENSGACG00000020387	srrt	52	62.474	Gasterosteus_aculeatus
ENSCSEG00000005233	-	84	87.701	ENSGACG00000001100	-	82	87.701	Gasterosteus_aculeatus
ENSCSEG00000005233	-	54	65.152	ENSHBUG00000002942	srrt	50	63.579	Haplochromis_burtoni
ENSCSEG00000005233	-	54	59.283	ENSHGLG00000008344	Srrt	94	57.490	Heterocephalus_glaber_female
ENSCSEG00000005233	-	54	60.043	ENSHGLG00100018857	Srrt	94	56.762	Heterocephalus_glaber_male
ENSCSEG00000005233	-	56	63.694	ENSHCOG00000005403	srrt	57	62.893	Hippocampus_comes
ENSCSEG00000005233	-	98	70.798	ENSHCOG00000008904	-	93	68.299	Hippocampus_comes
ENSCSEG00000005233	-	54	63.675	ENSSTOG00000013776	SRRT	93	52.747	Ictidomys_tridecemlineatus
ENSCSEG00000005233	-	58	58.812	ENSJJAG00000010446	Srrt	93	57.992	Jaculus_jaculus
ENSCSEG00000005233	-	88	85.398	ENSKMAG00000008468	-	83	88.235	Kryptolebias_marmoratus
ENSCSEG00000005233	-	94	55.746	ENSKMAG00000013599	srrt	92	55.280	Kryptolebias_marmoratus
ENSCSEG00000005233	-	96	56.071	ENSLBEG00000016308	srrt	54	62.971	Labrus_bergylta
ENSCSEG00000005233	-	55	86.777	ENSLBEG00000028983	-	79	84.726	Labrus_bergylta
ENSCSEG00000005233	-	94	45.793	ENSLACG00000001089	SRRT	51	51.116	Latimeria_chalumnae
ENSCSEG00000005233	-	71	65.714	ENSLOCG00000013658	srrt	76	63.793	Lepisosteus_oculatus
ENSCSEG00000005233	-	54	65.577	ENSMAMG00000014311	srrt	52	64.454	Mastacembelus_armatus
ENSCSEG00000005233	-	88	92.035	ENSMAMG00000010681	-	81	91.444	Mastacembelus_armatus
ENSCSEG00000005233	-	54	65.152	ENSMZEG00005016135	srrt	50	63.368	Maylandia_zebra
ENSCSEG00000005233	-	85	91.262	ENSMZEG00005028002	-	82	91.262	Maylandia_zebra
ENSCSEG00000005233	-	54	62.420	ENSMAUG00000011386	Srrt	94	57.606	Mesocricetus_auratus
ENSCSEG00000005233	-	79	62.633	ENSMOCG00000001971	Srrt	94	57.606	Microtus_ochrogaster
ENSCSEG00000005233	-	83	74.719	ENSMMOG00000011137	-	88	73.538	Mola_mola
ENSCSEG00000005233	-	95	56.643	ENSMMOG00000016399	srrt	92	55.793	Mola_mola
ENSCSEG00000005233	-	54	60.421	ENSMODG00000004862	SRRT	94	59.519	Monodelphis_domestica
ENSCSEG00000005233	-	63	62.715	ENSMALG00000005567	-	87	66.119	Monopterus_albus
ENSCSEG00000005233	-	87	51.443	ENSMALG00000018604	srrt	54	60.041	Monopterus_albus
ENSCSEG00000005233	-	54	59.660	MGP_CAROLIEiJ_G0027870	Srrt	96	57.143	Mus_caroli
ENSCSEG00000005233	-	54	59.873	ENSMUSG00000037364	Srrt	95	57.143	Mus_musculus
ENSCSEG00000005233	-	54	60.085	MGP_PahariEiJ_G0024456	Srrt	96	57.143	Mus_pahari
ENSCSEG00000005233	-	54	59.873	MGP_SPRETEiJ_G0028875	Srrt	96	57.143	Mus_spretus
ENSCSEG00000005233	-	54	63.136	ENSMPUG00000015839	SRRT	93	52.791	Mustela_putorius_furo
ENSCSEG00000005233	-	54	62.420	ENSMLUG00000009975	SRRT	93	52.855	Myotis_lucifugus
ENSCSEG00000005233	-	54	62.633	ENSNGAG00000023715	Srrt	100	54.025	Nannospalax_galili
ENSCSEG00000005233	-	54	65.502	ENSNBRG00000019100	srrt	92	54.156	Neolamprologus_brichardi
ENSCSEG00000005233	-	53	58.259	ENSNLEG00000011987	SRRT	57	59.144	Nomascus_leucogenys
ENSCSEG00000005233	-	94	45.858	ENSMEUG00000011941	SRRT	74	53.564	Notamacropus_eugenii
ENSCSEG00000005233	-	64	57.210	ENSOPRG00000002502	-	67	54.955	Ochotona_princeps
ENSCSEG00000005233	-	54	60.256	ENSODEG00000016856	SRRT	93	56.967	Octodon_degus
ENSCSEG00000005233	-	54	65.152	ENSONIG00000004242	srrt	52	62.603	Oreochromis_niloticus
ENSCSEG00000005233	-	97	89.610	ENSONIG00000016080	-	85	91.444	Oreochromis_niloticus
ENSCSEG00000005233	-	57	64.050	ENSORLG00000008120	srrt	52	64.119	Oryzias_latipes
ENSCSEG00000005233	-	96	53.783	ENSORLG00020003058	srrt	52	63.907	Oryzias_latipes_hni
ENSCSEG00000005233	-	96	53.721	ENSORLG00015008062	srrt	52	64.119	Oryzias_latipes_hsok
ENSCSEG00000005233	-	96	55.702	ENSOMEG00000003155	srrt	74	64.331	Oryzias_melastigma
ENSCSEG00000005233	-	54	63.248	ENSOARG00000015645	SRRT	93	52.068	Ovis_aries
ENSCSEG00000005233	-	54	63.519	ENSPPRG00000009557	SRRT	93	52.509	Panthera_pardus
ENSCSEG00000005233	-	96	55.235	ENSPKIG00000005434	srrt	72	64.744	Paramormyrops_kingsleyae
ENSCSEG00000005233	-	54	64.211	ENSPKIG00000022212	-	54	65.116	Paramormyrops_kingsleyae
ENSCSEG00000005233	-	54	62.635	ENSPSIG00000016311	SRRT	76	59.044	Pelodiscus_sinensis
ENSCSEG00000005233	-	54	64.009	ENSPMGG00000002841	srrt	62	60.878	Periophthalmus_magnuspinnatus
ENSCSEG00000005233	-	54	63.067	ENSPEMG00000010834	Srrt	93	57.172	Peromyscus_maniculatus_bairdii
ENSCSEG00000005233	-	96	51.976	ENSPMAG00000009614	-	93	50.496	Petromyzon_marinus
ENSCSEG00000005233	-	78	65.795	ENSPFOG00000005704	srrt	74	65.171	Poecilia_formosa
ENSCSEG00000005233	-	98	68.171	ENSPFOG00000016554	-	93	68.495	Poecilia_formosa
ENSCSEG00000005233	-	78	65.284	ENSPLAG00000021992	srrt	73	64.668	Poecilia_latipinna
ENSCSEG00000005233	-	98	70.940	ENSPLAG00000004526	-	93	70.385	Poecilia_latipinna
ENSCSEG00000005233	-	95	67.319	ENSPMEG00000001520	-	82	81.283	Poecilia_mexicana
ENSCSEG00000005233	-	78	64.824	ENSPMEG00000001182	srrt	81	65.263	Poecilia_mexicana
ENSCSEG00000005233	-	78	65.795	ENSPREG00000022308	srrt	74	65.171	Poecilia_reticulata
ENSCSEG00000005233	-	61	55.085	ENSPVAG00000000834	SRRT	100	45.573	Pteropus_vampyrus
ENSCSEG00000005233	-	54	65.152	ENSPNYG00000018710	srrt	52	63.368	Pundamilia_nyererei
ENSCSEG00000005233	-	65	71.642	ENSPNAG00000010629	srrt	68	61.194	Pygocentrus_nattereri
ENSCSEG00000005233	-	54	52.239	ENSRNOG00000048277	AABR07035787.1	97	51.434	Rattus_norvegicus
ENSCSEG00000005233	-	57	61.044	ENSSHAG00000007349	-	74	61.522	Sarcophilus_harrisii
ENSCSEG00000005233	-	54	64.968	ENSSFOG00015017293	srrt	52	65.966	Scleropages_formosus
ENSCSEG00000005233	-	94	55.381	ENSSMAG00000015342	srrt	55	65.458	Scophthalmus_maximus
ENSCSEG00000005233	-	82	76.957	ENSSMAG00000018195	-	93	75.570	Scophthalmus_maximus
ENSCSEG00000005233	-	55	72.766	ENSSDUG00000002051	-	96	72.363	Seriola_dumerili
ENSCSEG00000005233	-	82	64.557	ENSSDUG00000012049	srrt	92	56.127	Seriola_dumerili
ENSCSEG00000005233	-	94	55.030	ENSSLDG00000017477	srrt	54	64.468	Seriola_lalandi_dorsalis
ENSCSEG00000005233	-	76	88.838	ENSSPAG00000018943	-	96	78.205	Stegastes_partitus
ENSCSEG00000005233	-	54	65.236	ENSSPAG00000005665	srrt	51	63.333	Stegastes_partitus
ENSCSEG00000005233	-	54	61.715	ENSTRUG00000016075	srrt	53	61.411	Takifugu_rubripes
ENSCSEG00000005233	-	90	70.968	ENSTRUG00000000023	-	80	80.214	Takifugu_rubripes
ENSCSEG00000005233	-	54	60.331	ENSTNIG00000011779	srrt	73	61.331	Tetraodon_nigroviridis
ENSCSEG00000005233	-	83	75.810	ENSTNIG00000003111	-	82	77.905	Tetraodon_nigroviridis
ENSCSEG00000005233	-	54	63.136	ENSUMAG00000011295	SRRT	93	52.549	Ursus_maritimus
ENSCSEG00000005233	-	81	57.923	ENSXETG00000025124	srrt	75	57.895	Xenopus_tropicalis
ENSCSEG00000005233	-	56	64.706	ENSXCOG00000013105	-	93	64.924	Xiphophorus_couchianus
ENSCSEG00000005233	-	89	82.301	ENSXMAG00000002090	-	83	81.283	Xiphophorus_maculatus
ENSCSEG00000005233	-	54	65.359	ENSXMAG00000007627	srrt	52	64.744	Xiphophorus_maculatus