EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005240 (Gene tree)
Gene ID: 103390774
Gene Symbol: rbmx
Alias: fc66e11|wu:fb37c07|wu:fc66e11
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3958 bases
Position: chr15:8295094-8299051
Accession: 103390774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008236	RBM1CTR	PF08081.11	1e-19	1	1
ENSCSEP00000008214	RBM1CTR	PF08081.11	1.5e-19	1	1
ENSCSEP00000008236	RRM_1	PF00076.22	7.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008322	-	1179	XM_008326774	ENSCSEP00000008236	392 (aa)	XP_008324996	UPI0004956C8E
ENSCSET00000008300	-	774	-	ENSCSEP00000008214	257 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005240's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005240	rbmx	100	94.402	ENSAPOG00000006496	rbmx	100	93.130	Acanthochromis_polyacanthus
ENSCSEG00000005240	rbmx	100	91.858	ENSACIG00000011576	rbmx	100	90.076	Amphilophus_citrinellus
ENSCSEG00000005240	rbmx	97	93.625	ENSACIG00000011598	rbmx	98	88.342	Amphilophus_citrinellus
ENSCSEG00000005240	rbmx	100	95.674	ENSAOCG00000020930	rbmx	100	95.674	Amphiprion_ocellaris
ENSCSEG00000005240	rbmx	100	94.911	ENSAPEG00000007316	rbmx	94	95.913	Amphiprion_percula
ENSCSEG00000005240	rbmx	100	95.674	ENSATEG00000017363	rbmx	100	95.674	Anabas_testudineus
ENSCSEG00000005240	rbmx	100	94.148	ENSACLG00000000098	rbmx	100	94.148	Astatotilapia_calliptera
ENSCSEG00000005240	rbmx	94	85.445	ENSAMXG00000019990	rbmx	93	85.519	Astyanax_mexicanus
ENSCSEG00000005240	rbmx	93	90.437	ENSCVAG00000008876	rbmx	94	89.071	Cyprinodon_variegatus
ENSCSEG00000005240	rbmx	94	82.258	ENSDARG00000014244	rbmx	100	76.207	Danio_rerio
ENSCSEG00000005240	rbmx	96	52.130	ENSEBUG00000006778	rbmx	99	53.265	Eptatretus_burgeri
ENSCSEG00000005240	rbmx	100	85.751	ENSELUG00000003600	rbmx	100	85.496	Esox_lucius
ENSCSEG00000005240	rbmx	93	90.437	ENSFHEG00000016764	rbmx	94	89.071	Fundulus_heteroclitus
ENSCSEG00000005240	rbmx	100	84.539	ENSGMOG00000004496	rbmx	100	82.793	Gadus_morhua
ENSCSEG00000005240	rbmx	93	90.710	ENSGAFG00000019917	rbmx	93	89.071	Gambusia_affinis
ENSCSEG00000005240	rbmx	100	90.977	ENSGACG00000017237	rbmx	100	90.977	Gasterosteus_aculeatus
ENSCSEG00000005240	rbmx	100	94.402	ENSHBUG00000015283	rbmx	100	94.402	Haplochromis_burtoni
ENSCSEG00000005240	rbmx	93	84.097	ENSHCOG00000001111	rbmx	100	82.253	Hippocampus_comes
ENSCSEG00000005240	rbmx	100	80.506	ENSIPUG00000022212	rbmx	93	81.421	Ictalurus_punctatus
ENSCSEG00000005240	rbmx	93	92.098	ENSKMAG00000001754	rbmx	100	89.619	Kryptolebias_marmoratus
ENSCSEG00000005240	rbmx	100	90.840	ENSLBEG00000010000	rbmx	100	90.840	Labrus_bergylta
ENSCSEG00000005240	rbmx	93	71.277	ENSLACG00000015261	rbmx	93	67.098	Latimeria_chalumnae
ENSCSEG00000005240	rbmx	94	84.615	ENSLOCG00000015142	rbmx	93	84.492	Lepisosteus_oculatus
ENSCSEG00000005240	rbmx	100	96.183	ENSMAMG00000020591	rbmx	100	96.183	Mastacembelus_armatus
ENSCSEG00000005240	rbmx	90	94.648	ENSMZEG00005006432	rbmx	87	94.648	Maylandia_zebra
ENSCSEG00000005240	rbmx	100	93.893	ENSMMOG00000001043	rbmx	100	92.621	Mola_mola
ENSCSEG00000005240	rbmx	97	92.800	ENSMALG00000009777	rbmx	100	89.286	Monopterus_albus
ENSCSEG00000005240	rbmx	100	93.893	ENSNBRG00000022154	rbmx	100	93.893	Neolamprologus_brichardi
ENSCSEG00000005240	rbmx	100	93.384	ENSONIG00000002700	rbmx	100	93.384	Oreochromis_niloticus
ENSCSEG00000005240	rbmx	100	90.863	ENSORLG00000001692	rbmx	100	86.041	Oryzias_latipes
ENSCSEG00000005240	rbmx	100	91.117	ENSORLG00020021132	rbmx	100	86.294	Oryzias_latipes_hni
ENSCSEG00000005240	rbmx	100	90.355	ENSORLG00015000330	rbmx	100	90.355	Oryzias_latipes_hsok
ENSCSEG00000005240	rbmx	100	91.117	ENSOMEG00000016787	rbmx	100	91.371	Oryzias_melastigma
ENSCSEG00000005240	rbmx	100	83.038	ENSPKIG00000024910	-	93	80.163	Paramormyrops_kingsleyae
ENSCSEG00000005240	rbmx	97	73.123	ENSPKIG00000017611	rbmx	93	68.170	Paramormyrops_kingsleyae
ENSCSEG00000005240	rbmx	91	84.358	ENSPMGG00000017906	rbmx	95	81.421	Periophthalmus_magnuspinnatus
ENSCSEG00000005240	rbmx	93	90.710	ENSPFOG00000013193	rbmx	93	89.344	Poecilia_formosa
ENSCSEG00000005240	rbmx	93	90.437	ENSPLAG00000010472	rbmx	93	89.071	Poecilia_latipinna
ENSCSEG00000005240	rbmx	93	90.710	ENSPMEG00000007579	rbmx	93	89.344	Poecilia_mexicana
ENSCSEG00000005240	rbmx	93	90.437	ENSPREG00000010279	rbmx	93	89.071	Poecilia_reticulata
ENSCSEG00000005240	rbmx	100	94.402	ENSPNYG00000012536	rbmx	100	94.402	Pundamilia_nyererei
ENSCSEG00000005240	rbmx	94	86.828	ENSPNAG00000019648	rbmx	93	86.921	Pygocentrus_nattereri
ENSCSEG00000005240	rbmx	94	81.989	ENSSFOG00015008229	rbmx	93	82.880	Scleropages_formosus
ENSCSEG00000005240	rbmx	93	79.781	ENSSFOG00015011749	-	93	74.590	Scleropages_formosus
ENSCSEG00000005240	rbmx	100	92.366	ENSSMAG00000014636	rbmx	100	89.059	Scophthalmus_maximus
ENSCSEG00000005240	rbmx	100	96.183	ENSSDUG00000000242	rbmx	100	96.183	Seriola_dumerili
ENSCSEG00000005240	rbmx	100	96.438	ENSSLDG00000021381	rbmx	100	96.438	Seriola_lalandi_dorsalis
ENSCSEG00000005240	rbmx	100	94.911	ENSSPAG00000008582	rbmx	100	94.911	Stegastes_partitus
ENSCSEG00000005240	rbmx	94	90.296	ENSTRUG00000006031	rbmx	93	90.463	Takifugu_rubripes
ENSCSEG00000005240	rbmx	94	87.500	ENSTNIG00000016844	rbmx	93	89.130	Tetraodon_nigroviridis
ENSCSEG00000005240	rbmx	97	61.240	ENSUAMG00000011752	-	85	58.621	Ursus_americanus
ENSCSEG00000005240	rbmx	97	60.853	ENSUMAG00000019276	-	85	58.190	Ursus_maritimus
ENSCSEG00000005240	rbmx	87	69.658	ENSXETG00000003481	rbmx	93	50.653	Xenopus_tropicalis
ENSCSEG00000005240	rbmx	88	92.000	ENSXCOG00000016084	rbmx	92	82.633	Xiphophorus_couchianus
ENSCSEG00000005240	rbmx	93	90.437	ENSXMAG00000013407	rbmx	93	89.071	Xiphophorus_maculatus