EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005346 (Gene tree)
Gene ID: 103384959
Gene Symbol: exosc10
Alias: zgc:55695
Full Name: exosome component 10
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7517 bases
Position: chr10:10235152-10242668
Accession: 103384959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008362	HRDC	PF00570.23	2.2e-11	1	1
ENSCSEP00000008362	PMC2NT	PF08066.12	6.3e-22	1	1
ENSCSEP00000008362	DNA_pol_A_exo1	PF01612.20	8.6e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008449	-	2974	XM_008318680	ENSCSEP00000008362	896 (aa)	XP_008316902	UPI000495225C

Gene Model

Click here to download ENSCSEG00000005346's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005346	exosc10	97	60.113	ENSG00000171824	EXOSC10	99	60.113	Homo_sapiens
ENSCSEG00000005346	exosc10	98	83.409	ENSAPOG00000013304	exosc10	99	83.409	Acanthochromis_polyacanthus
ENSCSEG00000005346	exosc10	97	61.236	ENSAMEG00000009546	EXOSC10	99	61.236	Ailuropoda_melanoleuca
ENSCSEG00000005346	exosc10	96	74.682	ENSACIG00000020455	exosc10	99	74.566	Amphilophus_citrinellus
ENSCSEG00000005346	exosc10	98	75.283	ENSAOCG00000018823	exosc10	99	75.283	Amphiprion_ocellaris
ENSCSEG00000005346	exosc10	100	81.576	ENSAPEG00000017786	exosc10	100	81.576	Amphiprion_percula
ENSCSEG00000005346	exosc10	99	83.446	ENSATEG00000017271	exosc10	99	83.446	Anabas_testudineus
ENSCSEG00000005346	exosc10	95	61.618	ENSAPLG00000006652	EXOSC10	98	61.387	Anas_platyrhynchos
ENSCSEG00000005346	exosc10	94	58.810	ENSANAG00000031112	EXOSC10	99	58.926	Aotus_nancymaae
ENSCSEG00000005346	exosc10	97	83.124	ENSACLG00000025226	exosc10	100	82.287	Astatotilapia_calliptera
ENSCSEG00000005346	exosc10	98	67.370	ENSAMXG00000014510	exosc10	99	67.370	Astyanax_mexicanus
ENSCSEG00000005346	exosc10	75	67.007	ENSBTAG00000002590	EXOSC10	97	67.007	Bos_taurus
ENSCSEG00000005346	exosc10	62	38.664	WBGene00000796	crn-3	63	38.489	Caenorhabditis_elegans
ENSCSEG00000005346	exosc10	97	59.661	ENSCJAG00000002327	EXOSC10	99	59.774	Callithrix_jacchus
ENSCSEG00000005346	exosc10	97	60.835	ENSCAFG00000016721	EXOSC10	96	61.061	Canis_familiaris
ENSCSEG00000005346	exosc10	97	60.835	ENSCAFG00020002481	EXOSC10	96	61.061	Canis_lupus_dingo
ENSCSEG00000005346	exosc10	97	58.937	ENSCHIG00000020022	EXOSC10	98	59.251	Capra_hircus
ENSCSEG00000005346	exosc10	97	56.885	ENSTSYG00000006937	EXOSC10	98	57.111	Carlito_syrichta
ENSCSEG00000005346	exosc10	95	60.487	ENSCAPG00000006494	EXOSC10	99	60.484	Cavia_aperea
ENSCSEG00000005346	exosc10	97	60.068	ENSCPOG00000011628	EXOSC10	97	60.294	Cavia_porcellus
ENSCSEG00000005346	exosc10	97	56.982	ENSCCAG00000023223	EXOSC10	100	60.491	Cebus_capucinus
ENSCSEG00000005346	exosc10	98	60.022	ENSCATG00000039000	EXOSC10	92	68.130	Cercocebus_atys
ENSCSEG00000005346	exosc10	97	59.594	ENSCLAG00000005283	EXOSC10	99	59.707	Chinchilla_lanigera
ENSCSEG00000005346	exosc10	97	60.181	ENSCSAG00000000788	EXOSC10	99	60.181	Chlorocebus_sabaeus
ENSCSEG00000005346	exosc10	78	65.551	ENSCHOG00000012713	EXOSC10	87	63.247	Choloepus_hoffmanni
ENSCSEG00000005346	exosc10	96	62.144	ENSCPBG00000022004	EXOSC10	96	62.144	Chrysemys_picta_bellii
ENSCSEG00000005346	exosc10	61	50.000	ENSCSAVG00000009049	-	94	50.000	Ciona_savignyi
ENSCSEG00000005346	exosc10	98	59.574	ENSCANG00000042813	EXOSC10	99	59.574	Colobus_angolensis_palliatus
ENSCSEG00000005346	exosc10	97	61.036	ENSCGRG00001018469	Exosc10	99	60.787	Cricetulus_griseus_chok1gshd
ENSCSEG00000005346	exosc10	97	60.811	ENSCGRG00000002278	Exosc10	99	60.562	Cricetulus_griseus_crigri
ENSCSEG00000005346	exosc10	96	81.924	ENSCVAG00000016429	exosc10	99	80.652	Cyprinodon_variegatus
ENSCSEG00000005346	exosc10	96	67.120	ENSDARG00000037708	exosc10	97	67.982	Danio_rerio
ENSCSEG00000005346	exosc10	96	60.229	ENSDNOG00000011301	EXOSC10	98	60.229	Dasypus_novemcinctus
ENSCSEG00000005346	exosc10	97	57.370	ENSDORG00000003769	Exosc10	98	57.256	Dipodomys_ordii
ENSCSEG00000005346	exosc10	73	40.611	FBgn0038269	Rrp6	72	40.611	Drosophila_melanogaster
ENSCSEG00000005346	exosc10	93	59.929	ENSETEG00000000830	EXOSC10	98	59.390	Echinops_telfairi
ENSCSEG00000005346	exosc10	71	35.469	ENSEBUG00000004395	exosc10	99	35.417	Eptatretus_burgeri
ENSCSEG00000005346	exosc10	96	60.820	ENSEASG00005018716	EXOSC10	99	60.820	Equus_asinus_asinus
ENSCSEG00000005346	exosc10	97	60.992	ENSECAG00000011639	EXOSC10	99	61.330	Equus_caballus
ENSCSEG00000005346	exosc10	81	60.960	ENSEEUG00000001166	EXOSC10	86	60.960	Erinaceus_europaeus
ENSCSEG00000005346	exosc10	96	73.303	ENSELUG00000012870	exosc10	99	72.595	Esox_lucius
ENSCSEG00000005346	exosc10	97	60.203	ENSFCAG00000000052	EXOSC10	99	60.294	Felis_catus
ENSCSEG00000005346	exosc10	96	59.456	ENSFALG00000010287	EXOSC10	96	59.481	Ficedula_albicollis
ENSCSEG00000005346	exosc10	96	60.800	ENSFDAG00000002942	EXOSC10	97	60.914	Fukomys_damarensis
ENSCSEG00000005346	exosc10	99	78.965	ENSFHEG00000010678	exosc10	99	78.965	Fundulus_heteroclitus
ENSCSEG00000005346	exosc10	83	75.741	ENSGMOG00000006131	exosc10	90	75.741	Gadus_morhua
ENSCSEG00000005346	exosc10	96	61.111	ENSGALG00000003086	EXOSC10	95	60.499	Gallus_gallus
ENSCSEG00000005346	exosc10	98	79.275	ENSGAFG00000019222	exosc10	100	79.275	Gambusia_affinis
ENSCSEG00000005346	exosc10	98	77.053	ENSGACG00000007037	exosc10	99	77.053	Gasterosteus_aculeatus
ENSCSEG00000005346	exosc10	96	62.030	ENSGAGG00000000251	EXOSC10	100	61.642	Gopherus_agassizii
ENSCSEG00000005346	exosc10	97	60.339	ENSGGOG00000010572	EXOSC10	99	60.339	Gorilla_gorilla
ENSCSEG00000005346	exosc10	97	75.084	ENSHBUG00000020328	exosc10	99	74.778	Haplochromis_burtoni
ENSCSEG00000005346	exosc10	97	60.609	ENSHGLG00000011944	EXOSC10	99	60.497	Heterocephalus_glaber_female
ENSCSEG00000005346	exosc10	97	60.609	ENSHGLG00100014444	EXOSC10	99	60.497	Heterocephalus_glaber_male
ENSCSEG00000005346	exosc10	99	76.682	ENSHCOG00000016164	exosc10	100	77.018	Hippocampus_comes
ENSCSEG00000005346	exosc10	98	67.920	ENSIPUG00000021971	exosc10	99	67.699	Ictalurus_punctatus
ENSCSEG00000005346	exosc10	97	60.948	ENSSTOG00000005459	EXOSC10	99	61.287	Ictidomys_tridecemlineatus
ENSCSEG00000005346	exosc10	96	60.068	ENSJJAG00000013716	Exosc10	98	60.296	Jaculus_jaculus
ENSCSEG00000005346	exosc10	98	80.678	ENSKMAG00000015540	exosc10	99	80.678	Kryptolebias_marmoratus
ENSCSEG00000005346	exosc10	99	82.419	ENSLBEG00000022229	exosc10	100	82.419	Labrus_bergylta
ENSCSEG00000005346	exosc10	98	63.352	ENSLACG00000016691	EXOSC10	99	63.352	Latimeria_chalumnae
ENSCSEG00000005346	exosc10	98	67.933	ENSLOCG00000006443	exosc10	99	67.933	Lepisosteus_oculatus
ENSCSEG00000005346	exosc10	97	60.158	ENSLAFG00000016894	EXOSC10	99	60.292	Loxodonta_africana
ENSCSEG00000005346	exosc10	99	59.558	ENSMFAG00000038874	EXOSC10	99	59.330	Macaca_fascicularis
ENSCSEG00000005346	exosc10	98	60.246	ENSMMUG00000019322	EXOSC10	99	60.246	Macaca_mulatta
ENSCSEG00000005346	exosc10	98	60.022	ENSMNEG00000035812	EXOSC10	99	60.022	Macaca_nemestrina
ENSCSEG00000005346	exosc10	98	60.022	ENSMLEG00000025160	EXOSC10	99	60.022	Mandrillus_leucophaeus
ENSCSEG00000005346	exosc10	98	81.200	ENSMAMG00000019375	exosc10	99	80.974	Mastacembelus_armatus
ENSCSEG00000005346	exosc10	97	83.124	ENSMZEG00005013730	exosc10	100	82.287	Maylandia_zebra
ENSCSEG00000005346	exosc10	95	60.069	ENSMGAG00000004665	EXOSC10	99	59.977	Meleagris_gallopavo
ENSCSEG00000005346	exosc10	65	68.971	ENSMAUG00000019261	Exosc10	96	68.971	Mesocricetus_auratus
ENSCSEG00000005346	exosc10	97	60.973	ENSMICG00000003858	EXOSC10	99	61.312	Microcebus_murinus
ENSCSEG00000005346	exosc10	65	68.930	ENSMOCG00000016509	Exosc10	95	68.930	Microtus_ochrogaster
ENSCSEG00000005346	exosc10	98	75.905	ENSMMOG00000009265	exosc10	99	75.452	Mola_mola
ENSCSEG00000005346	exosc10	96	60.825	ENSMODG00000011194	EXOSC10	97	61.054	Monodelphis_domestica
ENSCSEG00000005346	exosc10	99	81.369	ENSMALG00000021322	exosc10	99	81.369	Monopterus_albus
ENSCSEG00000005346	exosc10	97	60.337	MGP_CAROLIEiJ_G0026802	Exosc10	96	68.465	Mus_caroli
ENSCSEG00000005346	exosc10	97	59.888	ENSMUSG00000017264	Exosc10	96	68.297	Mus_musculus
ENSCSEG00000005346	exosc10	97	60.767	MGP_PahariEiJ_G0029150	Exosc10	95	68.930	Mus_pahari
ENSCSEG00000005346	exosc10	97	60.339	MGP_SPRETEiJ_G0027795	Exosc10	96	68.297	Mus_spretus
ENSCSEG00000005346	exosc10	97	60.497	ENSMPUG00000016434	EXOSC10	96	60.497	Mustela_putorius_furo
ENSCSEG00000005346	exosc10	97	61.305	ENSMLUG00000004276	EXOSC10	98	61.642	Myotis_lucifugus
ENSCSEG00000005346	exosc10	97	60.497	ENSNGAG00000023829	Exosc10	99	60.722	Nannospalax_galili
ENSCSEG00000005346	exosc10	98	77.247	ENSNBRG00000006256	exosc10	99	76.524	Neolamprologus_brichardi
ENSCSEG00000005346	exosc10	96	59.932	ENSNLEG00000009539	EXOSC10	97	59.817	Nomascus_leucogenys
ENSCSEG00000005346	exosc10	72	89.189	ENSMEUG00000007020	-	73	89.189	Notamacropus_eugenii
ENSCSEG00000005346	exosc10	97	60.855	ENSOPRG00000012091	EXOSC10	99	60.806	Ochotona_princeps
ENSCSEG00000005346	exosc10	96	60.114	ENSODEG00000013285	EXOSC10	97	60.343	Octodon_degus
ENSCSEG00000005346	exosc10	85	85.452	ENSONIG00000002322	exosc10	99	84.665	Oreochromis_niloticus
ENSCSEG00000005346	exosc10	97	58.343	ENSOANG00000013322	EXOSC10	99	58.305	Ornithorhynchus_anatinus
ENSCSEG00000005346	exosc10	97	60.654	ENSOCUG00000013039	EXOSC10	99	60.831	Oryctolagus_cuniculus
ENSCSEG00000005346	exosc10	98	79.007	ENSORLG00000005117	exosc10	100	80.248	Oryzias_latipes
ENSCSEG00000005346	exosc10	98	79.458	ENSORLG00020013529	exosc10	99	79.684	Oryzias_latipes_hni
ENSCSEG00000005346	exosc10	98	79.661	ENSORLG00015005525	exosc10	99	79.661	Oryzias_latipes_hsok
ENSCSEG00000005346	exosc10	97	79.590	ENSOMEG00000003337	exosc10	98	79.590	Oryzias_melastigma
ENSCSEG00000005346	exosc10	97	57.143	ENSOGAG00000013662	EXOSC10	99	57.143	Otolemur_garnettii
ENSCSEG00000005346	exosc10	97	61.348	ENSOARG00000003668	EXOSC10	99	61.409	Ovis_aries
ENSCSEG00000005346	exosc10	97	60.339	ENSPPAG00000038356	EXOSC10	99	60.226	Pan_paniscus
ENSCSEG00000005346	exosc10	97	59.729	ENSPPRG00000022976	EXOSC10	99	59.955	Panthera_pardus
ENSCSEG00000005346	exosc10	93	60.563	ENSPTIG00000012735	EXOSC10	97	60.235	Panthera_tigris_altaica
ENSCSEG00000005346	exosc10	97	57.305	ENSPTRG00000000140	EXOSC10	98	57.305	Pan_troglodytes
ENSCSEG00000005346	exosc10	98	59.239	ENSPANG00000026088	EXOSC10	99	59.239	Papio_anubis
ENSCSEG00000005346	exosc10	98	66.890	ENSPKIG00000013098	exosc10	98	67.226	Paramormyrops_kingsleyae
ENSCSEG00000005346	exosc10	98	60.424	ENSPSIG00000005078	EXOSC10	98	61.093	Pelodiscus_sinensis
ENSCSEG00000005346	exosc10	64	81.597	ENSPMGG00000022241	exosc10	99	80.750	Periophthalmus_magnuspinnatus
ENSCSEG00000005346	exosc10	76	66.000	ENSPEMG00000007753	Exosc10	97	66.000	Peromyscus_maniculatus_bairdii
ENSCSEG00000005346	exosc10	54	51.417	ENSPMAG00000006909	exosc10	100	51.417	Petromyzon_marinus
ENSCSEG00000005346	exosc10	95	55.156	ENSPCIG00000004840	EXOSC10	93	68.394	Phascolarctos_cinereus
ENSCSEG00000005346	exosc10	99	79.143	ENSPFOG00000004744	exosc10	99	79.143	Poecilia_formosa
ENSCSEG00000005346	exosc10	99	78.587	ENSPLAG00000010253	exosc10	100	78.587	Poecilia_latipinna
ENSCSEG00000005346	exosc10	99	78.805	ENSPMEG00000005740	exosc10	99	78.805	Poecilia_mexicana
ENSCSEG00000005346	exosc10	99	78.700	ENSPREG00000016285	exosc10	100	78.700	Poecilia_reticulata
ENSCSEG00000005346	exosc10	98	60.067	ENSPPYG00000001891	EXOSC10	96	60.067	Pongo_abelii
ENSCSEG00000005346	exosc10	82	63.141	ENSPCAG00000001583	EXOSC10	93	63.141	Procavia_capensis
ENSCSEG00000005346	exosc10	97	61.155	ENSPCOG00000013742	EXOSC10	99	61.495	Propithecus_coquereli
ENSCSEG00000005346	exosc10	97	60.362	ENSPVAG00000014780	EXOSC10	99	60.702	Pteropus_vampyrus
ENSCSEG00000005346	exosc10	97	83.124	ENSPNYG00000007387	exosc10	100	82.287	Pundamilia_nyererei
ENSCSEG00000005346	exosc10	97	67.738	ENSPNAG00000028864	exosc10	99	67.547	Pygocentrus_nattereri
ENSCSEG00000005346	exosc10	97	60.339	ENSRNOG00000010719	Exosc10	99	59.663	Rattus_norvegicus
ENSCSEG00000005346	exosc10	98	53.139	ENSRBIG00000039772	EXOSC10	99	53.139	Rhinopithecus_bieti
ENSCSEG00000005346	exosc10	98	59.798	ENSRROG00000036700	EXOSC10	99	59.798	Rhinopithecus_roxellana
ENSCSEG00000005346	exosc10	59	35.727	YOR001W	-	68	35.727	Saccharomyces_cerevisiae
ENSCSEG00000005346	exosc10	96	56.407	ENSSBOG00000020768	EXOSC10	99	56.636	Saimiri_boliviensis_boliviensis
ENSCSEG00000005346	exosc10	95	59.651	ENSSHAG00000013572	EXOSC10	100	59.651	Sarcophilus_harrisii
ENSCSEG00000005346	exosc10	94	66.393	ENSSFOG00015004512	exosc10	98	66.393	Scleropages_formosus
ENSCSEG00000005346	exosc10	97	84.271	ENSSMAG00000017318	exosc10	99	83.409	Scophthalmus_maximus
ENSCSEG00000005346	exosc10	99	85.393	ENSSDUG00000006646	exosc10	99	85.393	Seriola_dumerili
ENSCSEG00000005346	exosc10	99	84.831	ENSSLDG00000025554	exosc10	99	84.831	Seriola_lalandi_dorsalis
ENSCSEG00000005346	exosc10	77	50.850	ENSSARG00000013171	EXOSC10	95	51.000	Sorex_araneus
ENSCSEG00000005346	exosc10	94	61.833	ENSSPUG00000006844	EXOSC10	96	71.478	Sphenodon_punctatus
ENSCSEG00000005346	exosc10	98	83.747	ENSSPAG00000007053	exosc10	99	83.747	Stegastes_partitus
ENSCSEG00000005346	exosc10	89	60.832	ENSSSCG00000003412	EXOSC10	100	61.200	Sus_scrofa
ENSCSEG00000005346	exosc10	95	58.885	ENSTGUG00000002231	EXOSC10	99	58.885	Taeniopygia_guttata
ENSCSEG00000005346	exosc10	100	75.431	ENSTRUG00000012484	exosc10	100	75.519	Takifugu_rubripes
ENSCSEG00000005346	exosc10	96	79.700	ENSTNIG00000015181	exosc10	99	79.700	Tetraodon_nigroviridis
ENSCSEG00000005346	exosc10	69	78.195	ENSTBEG00000017471	-	69	78.195	Tupaia_belangeri
ENSCSEG00000005346	exosc10	97	60.225	ENSTTRG00000001320	EXOSC10	99	60.449	Tursiops_truncatus
ENSCSEG00000005346	exosc10	93	61.059	ENSUAMG00000014404	EXOSC10	97	61.294	Ursus_americanus
ENSCSEG00000005346	exosc10	97	59.364	ENSUMAG00000023413	EXOSC10	99	64.317	Ursus_maritimus
ENSCSEG00000005346	exosc10	60	72.527	ENSVPAG00000004629	EXOSC10	62	72.527	Vicugna_pacos
ENSCSEG00000005346	exosc10	89	60.710	ENSVVUG00000027116	EXOSC10	100	60.955	Vulpes_vulpes
ENSCSEG00000005346	exosc10	96	55.090	ENSXETG00000006318	exosc10	100	54.864	Xenopus_tropicalis
ENSCSEG00000005346	exosc10	98	79.007	ENSXCOG00000004665	exosc10	99	79.007	Xiphophorus_couchianus
ENSCSEG00000005346	exosc10	99	79.036	ENSXMAG00000011246	exosc10	100	79.036	Xiphophorus_maculatus