EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005415 (Gene tree)
Gene ID: 103377824
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13531 bases
Position: chr4:6402963-6416493
Accession: 103377824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008486	B3_4	PF03483.17	3.1e-27	1	1
ENSCSEP00000008477	B3_4	PF03483.17	4.6e-27	1	1
ENSCSEP00000008470	B3_4	PF03483.17	5.5e-27	1	1
ENSCSEP00000008465	B3_4	PF03483.17	5.6e-27	1	1
ENSCSEP00000008465	B5	PF03484.15	1.7e-14	1	1
ENSCSEP00000008477	B5	PF03484.15	2e-14	1	1
ENSCSEP00000008470	B5	PF03484.15	2.6e-14	1	1
ENSCSEP00000008486	B5	PF03484.15	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008559	-	1938	XM_017031991	ENSCSEP00000008470	621 (aa)	XP_016887480	-
ENSCSET00000008566	-	1917	-	ENSCSEP00000008477	573 (aa)	-	-
ENSCSET00000008574	-	1458	-	ENSCSEP00000008486	485 (aa)	-	-
ENSCSET00000008554	-	1884	-	ENSCSEP00000008465	628 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005415's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005415	farsb	100	73.171	ENSG00000116120	FARSB	100	75.763	Homo_sapiens
ENSCSEG00000005415	farsb	100	90.560	ENSAPOG00000013072	farsb	100	85.569	Acanthochromis_polyacanthus
ENSCSEG00000005415	farsb	100	72.300	ENSAMEG00000005984	FARSB	100	75.254	Ailuropoda_melanoleuca
ENSCSEG00000005415	farsb	100	86.187	ENSACIG00000021623	farsb	100	88.115	Amphilophus_citrinellus
ENSCSEG00000005415	farsb	100	89.920	ENSAOCG00000004912	farsb	100	86.927	Amphiprion_ocellaris
ENSCSEG00000005415	farsb	100	89.920	ENSAPEG00000001153	farsb	100	84.720	Amphiprion_percula
ENSCSEG00000005415	farsb	100	89.440	ENSATEG00000021441	farsb	74	89.440	Anabas_testudineus
ENSCSEG00000005415	farsb	100	71.455	ENSAPLG00000010292	FARSB	99	75.643	Anas_platyrhynchos
ENSCSEG00000005415	farsb	99	72.711	ENSACAG00000004769	FARSB	98	75.382	Anolis_carolinensis
ENSCSEG00000005415	farsb	100	72.474	ENSANAG00000024637	FARSB	100	75.254	Aotus_nancymaae
ENSCSEG00000005415	farsb	99	91.354	ENSACLG00000013951	farsb	100	89.558	Astatotilapia_calliptera
ENSCSEG00000005415	farsb	96	79.095	ENSAMXG00000033881	farsb	100	82.365	Astyanax_mexicanus
ENSCSEG00000005415	farsb	100	73.519	ENSBTAG00000011649	FARSB	100	76.102	Bos_taurus
ENSCSEG00000005415	farsb	100	69.030	ENSBTAG00000045523	-	100	75.221	Bos_taurus
ENSCSEG00000005415	farsb	100	55.473	WBGene00001498	fars-3	100	58.277	Caenorhabditis_elegans
ENSCSEG00000005415	farsb	100	72.997	ENSCJAG00000012181	FARSB	100	75.763	Callithrix_jacchus
ENSCSEG00000005415	farsb	100	73.345	ENSCAFG00000016094	-	100	75.932	Canis_familiaris
ENSCSEG00000005415	farsb	100	70.623	ENSCAFG00020026684	FARSB	100	75.532	Canis_lupus_dingo
ENSCSEG00000005415	farsb	100	73.868	ENSCHIG00000014275	FARSB	100	76.441	Capra_hircus
ENSCSEG00000005415	farsb	100	72.300	ENSTSYG00000008461	FARSB	100	75.085	Carlito_syrichta
ENSCSEG00000005415	farsb	100	65.562	ENSCAPG00000016436	FARSB	99	68.870	Cavia_aperea
ENSCSEG00000005415	farsb	95	74.915	ENSCPOG00000013109	FARSB	100	74.915	Cavia_porcellus
ENSCSEG00000005415	farsb	95	71.356	ENSCCAG00000025840	FARSB	100	71.356	Cebus_capucinus
ENSCSEG00000005415	farsb	100	72.997	ENSCATG00000036168	FARSB	100	75.763	Cercocebus_atys
ENSCSEG00000005415	farsb	100	72.648	ENSCLAG00000011954	FARSB	100	75.424	Chinchilla_lanigera
ENSCSEG00000005415	farsb	100	72.997	ENSCSAG00000007806	FARSB	100	75.763	Chlorocebus_sabaeus
ENSCSEG00000005415	farsb	82	90.625	ENSCHOG00000011785	FARSB	77	89.394	Choloepus_hoffmanni
ENSCSEG00000005415	farsb	95	76.570	ENSCPBG00000019346	FARSB	98	76.570	Chrysemys_picta_bellii
ENSCSEG00000005415	farsb	100	58.406	ENSCING00000004180	-	99	60.368	Ciona_intestinalis
ENSCSEG00000005415	farsb	95	60.870	ENSCSAVG00000005346	-	99	60.870	Ciona_savignyi
ENSCSEG00000005415	farsb	97	72.563	ENSCANG00000036239	FARSB	100	75.439	Colobus_angolensis_palliatus
ENSCSEG00000005415	farsb	100	73.519	ENSCGRG00001022928	Farsb	100	76.271	Cricetulus_griseus_chok1gshd
ENSCSEG00000005415	farsb	100	73.519	ENSCGRG00000001513	Farsb	100	76.271	Cricetulus_griseus_crigri
ENSCSEG00000005415	farsb	79	85.333	ENSCVAG00000018815	farsb	98	85.333	Cyprinodon_variegatus
ENSCSEG00000005415	farsb	95	83.729	ENSDARG00000016864	farsb	100	83.729	Danio_rerio
ENSCSEG00000005415	farsb	100	71.951	ENSDNOG00000002511	FARSB	100	74.576	Dasypus_novemcinctus
ENSCSEG00000005415	farsb	100	72.648	ENSDORG00000011102	Farsb	100	75.424	Dipodomys_ordii
ENSCSEG00000005415	farsb	100	59.218	FBgn0039175	beta-PheRS	100	63.069	Drosophila_melanogaster
ENSCSEG00000005415	farsb	100	68.097	ENSETEG00000015080	FARSB	100	74.386	Echinops_telfairi
ENSCSEG00000005415	farsb	97	63.327	ENSEBUG00000006846	farsb	100	64.576	Eptatretus_burgeri
ENSCSEG00000005415	farsb	100	73.519	ENSEASG00005011297	FARSB	100	75.932	Equus_asinus_asinus
ENSCSEG00000005415	farsb	96	75.818	ENSECAG00000023086	FARSB	99	76.147	Equus_caballus
ENSCSEG00000005415	farsb	89	70.213	ENSEEUG00000007441	FARSB	91	70.213	Erinaceus_europaeus
ENSCSEG00000005415	farsb	95	84.532	ENSELUG00000014767	farsb	99	85.614	Esox_lucius
ENSCSEG00000005415	farsb	100	72.997	ENSFCAG00000026772	FARSB	100	75.593	Felis_catus
ENSCSEG00000005415	farsb	100	69.590	ENSFALG00000006739	FARSB	97	75.439	Ficedula_albicollis
ENSCSEG00000005415	farsb	100	72.648	ENSFDAG00000008871	FARSB	100	75.593	Fukomys_damarensis
ENSCSEG00000005415	farsb	100	88.746	ENSFHEG00000020939	farsb	98	90.000	Fundulus_heteroclitus
ENSCSEG00000005415	farsb	94	84.815	ENSGMOG00000013047	farsb	100	84.815	Gadus_morhua
ENSCSEG00000005415	farsb	100	73.473	ENSGALG00000005236	FARSB	100	76.570	Gallus_gallus
ENSCSEG00000005415	farsb	100	86.473	ENSGAFG00000020900	farsb	100	75.127	Gambusia_affinis
ENSCSEG00000005415	farsb	94	88.704	ENSGACG00000000261	farsb	100	88.704	Gasterosteus_aculeatus
ENSCSEG00000005415	farsb	95	77.080	ENSGAGG00000016575	FARSB	98	77.080	Gopherus_agassizii
ENSCSEG00000005415	farsb	99	91.354	ENSHBUG00000022379	farsb	100	88.964	Haplochromis_burtoni
ENSCSEG00000005415	farsb	100	72.822	ENSHGLG00000015965	FARSB	100	75.593	Heterocephalus_glaber_female
ENSCSEG00000005415	farsb	100	72.822	ENSHGLG00100001035	FARSB	100	75.593	Heterocephalus_glaber_male
ENSCSEG00000005415	farsb	100	87.400	ENSHCOG00000016462	farsb	100	87.400	Hippocampus_comes
ENSCSEG00000005415	farsb	95	84.211	ENSIPUG00000002754	farsb	100	84.211	Ictalurus_punctatus
ENSCSEG00000005415	farsb	100	73.171	ENSSTOG00000016169	FARSB	100	75.932	Ictidomys_tridecemlineatus
ENSCSEG00000005415	farsb	100	72.125	ENSJJAG00000003267	Farsb	100	75.085	Jaculus_jaculus
ENSCSEG00000005415	farsb	100	79.684	ENSKMAG00000005363	farsb	100	81.419	Kryptolebias_marmoratus
ENSCSEG00000005415	farsb	100	88.640	ENSLBEG00000018127	farsb	74	88.640	Labrus_bergylta
ENSCSEG00000005415	farsb	95	79.889	ENSLACG00000002551	FARSB	100	79.796	Latimeria_chalumnae
ENSCSEG00000005415	farsb	100	79.581	ENSLOCG00000004136	farsb	100	82.852	Lepisosteus_oculatus
ENSCSEG00000005415	farsb	100	72.474	ENSLAFG00000015659	FARSB	100	75.254	Loxodonta_africana
ENSCSEG00000005415	farsb	100	72.822	ENSMFAG00000036645	FARSB	100	75.593	Macaca_fascicularis
ENSCSEG00000005415	farsb	100	70.383	ENSMMUG00000007685	FARSB	100	73.220	Macaca_mulatta
ENSCSEG00000005415	farsb	100	72.648	ENSMNEG00000030672	FARSB	100	75.424	Macaca_nemestrina
ENSCSEG00000005415	farsb	100	72.997	ENSMLEG00000042060	FARSB	100	75.763	Mandrillus_leucophaeus
ENSCSEG00000005415	farsb	99	89.756	ENSMAMG00000011835	farsb	100	82.852	Mastacembelus_armatus
ENSCSEG00000005415	farsb	100	83.865	ENSMZEG00005004544	farsb	100	89.539	Maylandia_zebra
ENSCSEG00000005415	farsb	100	70.336	ENSMGAG00000004670	FARSB	100	75.492	Meleagris_gallopavo
ENSCSEG00000005415	farsb	71	75.000	ENSMAUG00000017805	Farsb	100	75.000	Mesocricetus_auratus
ENSCSEG00000005415	farsb	100	73.519	ENSMICG00000002495	FARSB	100	76.441	Microcebus_murinus
ENSCSEG00000005415	farsb	100	74.171	ENSMOCG00000003181	Farsb	100	76.910	Microtus_ochrogaster
ENSCSEG00000005415	farsb	100	79.767	ENSMMOG00000006265	farsb	100	81.324	Mola_mola
ENSCSEG00000005415	farsb	100	73.997	ENSMODG00000021192	FARSB	100	76.740	Monodelphis_domestica
ENSCSEG00000005415	farsb	95	90.590	ENSMALG00000021188	farsb	92	90.926	Monopterus_albus
ENSCSEG00000005415	farsb	95	76.271	MGP_CAROLIEiJ_G0014310	Farsb	100	76.271	Mus_caroli
ENSCSEG00000005415	farsb	95	76.102	ENSMUSG00000026245	Farsb	100	76.102	Mus_musculus
ENSCSEG00000005415	farsb	95	76.102	MGP_PahariEiJ_G0027548	Farsb	100	76.102	Mus_pahari
ENSCSEG00000005415	farsb	95	76.102	MGP_SPRETEiJ_G0015116	Farsb	100	76.102	Mus_spretus
ENSCSEG00000005415	farsb	100	72.648	ENSMPUG00000016677	FARSB	100	75.424	Mustela_putorius_furo
ENSCSEG00000005415	farsb	100	73.519	ENSMLUG00000010904	FARSB	100	76.102	Myotis_lucifugus
ENSCSEG00000005415	farsb	100	72.251	ENSNGAG00000014602	Farsb	100	75.042	Nannospalax_galili
ENSCSEG00000005415	farsb	99	91.680	ENSNBRG00000003198	farsb	100	86.927	Neolamprologus_brichardi
ENSCSEG00000005415	farsb	100	73.171	ENSNLEG00000009638	FARSB	100	75.932	Nomascus_leucogenys
ENSCSEG00000005415	farsb	100	63.874	ENSMEUG00000010798	FARSB	100	66.893	Notamacropus_eugenii
ENSCSEG00000005415	farsb	100	53.136	ENSOPRG00000003292	FARSB	100	56.441	Ochotona_princeps
ENSCSEG00000005415	farsb	100	72.474	ENSODEG00000005451	FARSB	100	75.424	Octodon_degus
ENSCSEG00000005415	farsb	95	92.699	ENSONIG00000014639	farsb	100	92.699	Oreochromis_niloticus
ENSCSEG00000005415	farsb	93	73.084	ENSOANG00000015387	FARSB	100	73.084	Ornithorhynchus_anatinus
ENSCSEG00000005415	farsb	95	75.780	ENSOCUG00000007828	FARSB	95	75.780	Oryctolagus_cuniculus
ENSCSEG00000005415	farsb	99	89.869	ENSORLG00000009135	farsb	100	87.946	Oryzias_latipes
ENSCSEG00000005415	farsb	100	88.622	ENSORLG00015001072	farsb	100	80.136	Oryzias_latipes_hsok
ENSCSEG00000005415	farsb	100	88.567	ENSOMEG00000019009	farsb	100	85.399	Oryzias_melastigma
ENSCSEG00000005415	farsb	100	67.182	ENSOGAG00000010125	FARSB	100	70.401	Otolemur_garnettii
ENSCSEG00000005415	farsb	100	73.868	ENSOARG00000020329	FARSB	100	76.441	Ovis_aries
ENSCSEG00000005415	farsb	100	73.519	ENSPPAG00000039268	FARSB	100	76.271	Pan_paniscus
ENSCSEG00000005415	farsb	100	72.822	ENSPPRG00000010687	FARSB	100	75.424	Panthera_pardus
ENSCSEG00000005415	farsb	100	72.474	ENSPTIG00000004299	FARSB	100	75.085	Panthera_tigris_altaica
ENSCSEG00000005415	farsb	100	73.519	ENSPTRG00000012974	FARSB	100	76.271	Pan_troglodytes
ENSCSEG00000005415	farsb	100	72.997	ENSPANG00000016304	FARSB	100	75.763	Papio_anubis
ENSCSEG00000005415	farsb	100	76.459	ENSPKIG00000006661	farsb	100	81.324	Paramormyrops_kingsleyae
ENSCSEG00000005415	farsb	100	70.709	ENSPSIG00000006248	FARSB	99	75.639	Pelodiscus_sinensis
ENSCSEG00000005415	farsb	94	83.403	ENSPMGG00000002815	farsb	100	87.526	Periophthalmus_magnuspinnatus
ENSCSEG00000005415	farsb	100	73.171	ENSPEMG00000003131	Farsb	100	75.932	Peromyscus_maniculatus_bairdii
ENSCSEG00000005415	farsb	97	75.180	ENSPCIG00000019458	FARSB	100	76.570	Phascolarctos_cinereus
ENSCSEG00000005415	farsb	100	89.068	ENSPLAG00000001104	farsb	100	82.301	Poecilia_latipinna
ENSCSEG00000005415	farsb	100	89.389	ENSPMEG00000017658	farsb	100	82.655	Poecilia_mexicana
ENSCSEG00000005415	farsb	100	88.907	ENSPREG00000010583	farsb	100	82.513	Poecilia_reticulata
ENSCSEG00000005415	farsb	100	73.171	ENSPPYG00000013221	FARSB	100	75.932	Pongo_abelii
ENSCSEG00000005415	farsb	94	65.618	ENSPCAG00000002757	FARSB	85	67.600	Procavia_capensis
ENSCSEG00000005415	farsb	63	83.333	ENSPCOG00000028852	FARSB	100	83.333	Propithecus_coquereli
ENSCSEG00000005415	farsb	100	72.997	ENSPVAG00000006985	FARSB	100	75.763	Pteropus_vampyrus
ENSCSEG00000005415	farsb	95	79.117	ENSPNYG00000011433	farsb	100	79.117	Pundamilia_nyererei
ENSCSEG00000005415	farsb	95	84.720	ENSPNAG00000021802	farsb	100	84.720	Pygocentrus_nattereri
ENSCSEG00000005415	farsb	95	76.441	ENSRNOG00000014119	Farsb	100	76.441	Rattus_norvegicus
ENSCSEG00000005415	farsb	97	74.775	ENSRBIG00000033191	FARSB	99	74.775	Rhinopithecus_bieti
ENSCSEG00000005415	farsb	100	72.997	ENSRROG00000029388	FARSB	100	75.763	Rhinopithecus_roxellana
ENSCSEG00000005415	farsb	98	41.989	YLR060W	FRS1	100	43.770	Saccharomyces_cerevisiae
ENSCSEG00000005415	farsb	100	65.505	ENSSBOG00000019084	FARSB	100	68.475	Saimiri_boliviensis_boliviensis
ENSCSEG00000005415	farsb	94	70.696	ENSSHAG00000015752	FARSB	100	70.696	Sarcophilus_harrisii
ENSCSEG00000005415	farsb	95	80.306	ENSSFOG00015007850	farsb	100	80.306	Scleropages_formosus
ENSCSEG00000005415	farsb	100	92.000	ENSSMAG00000020668	farsb	100	90.323	Scophthalmus_maximus
ENSCSEG00000005415	farsb	100	92.320	ENSSDUG00000009685	farsb	100	87.227	Seriola_dumerili
ENSCSEG00000005415	farsb	100	92.160	ENSSLDG00000025206	farsb	100	87.776	Seriola_lalandi_dorsalis
ENSCSEG00000005415	farsb	69	77.397	ENSSARG00000005655	-	66	77.397	Sorex_araneus
ENSCSEG00000005415	farsb	100	65.299	ENSSPUG00000002245	FARSB	100	72.014	Sphenodon_punctatus
ENSCSEG00000005415	farsb	100	90.080	ENSSPAG00000007367	farsb	74	90.080	Stegastes_partitus
ENSCSEG00000005415	farsb	100	67.422	ENSSSCG00000032016	-	100	70.508	Sus_scrofa
ENSCSEG00000005415	farsb	100	72.648	ENSSSCG00000016226	-	100	75.593	Sus_scrofa
ENSCSEG00000005415	farsb	100	69.403	ENSTGUG00000007788	FARSB	100	75.088	Taeniopygia_guttata
ENSCSEG00000005415	farsb	100	84.480	ENSTRUG00000009483	farsb	74	84.480	Takifugu_rubripes
ENSCSEG00000005415	farsb	95	85.739	ENSTNIG00000014310	farsb	100	85.739	Tetraodon_nigroviridis
ENSCSEG00000005415	farsb	95	51.864	ENSTBEG00000003136	FARSB	100	51.864	Tupaia_belangeri
ENSCSEG00000005415	farsb	85	76.884	ENSTTRG00000009082	FARSB	88	76.884	Tursiops_truncatus
ENSCSEG00000005415	farsb	95	68.313	ENSUAMG00000024613	FARSB	99	71.657	Ursus_americanus
ENSCSEG00000005415	farsb	100	72.474	ENSUMAG00000017995	FARSB	100	75.424	Ursus_maritimus
ENSCSEG00000005415	farsb	94	72.694	ENSVPAG00000006844	FARSB	100	72.694	Vicugna_pacos
ENSCSEG00000005415	farsb	100	73.345	ENSVVUG00000024025	FARSB	100	75.932	Vulpes_vulpes
ENSCSEG00000005415	farsb	95	76.271	ENSXETG00000002934	farsb	100	76.271	Xenopus_tropicalis
ENSCSEG00000005415	farsb	100	87.299	ENSXMAG00000008280	farsb	100	76.740	Xiphophorus_maculatus