EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000005456 (Gene tree)
Gene ID: 107989405
Gene Symbol: si:ch211-79k12.2
Alias: -
Full Name: zinc finger protein 436-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6419 bases
Position: chr13:10240109-10246527
Accession: 107989405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008543	zf-C2H2	PF00096.26	1.6e-28	1	5
ENSCSEP00000008543	zf-C2H2	PF00096.26	1.6e-28	2	5
ENSCSEP00000008543	zf-C2H2	PF00096.26	1.6e-28	3	5
ENSCSEP00000008543	zf-C2H2	PF00096.26	1.6e-28	4	5
ENSCSEP00000008543	zf-C2H2	PF00096.26	1.6e-28	5	5
ENSCSEP00000008540	zf-C2H2	PF00096.26	1.8e-28	1	5
ENSCSEP00000008540	zf-C2H2	PF00096.26	1.8e-28	2	5
ENSCSEP00000008540	zf-C2H2	PF00096.26	1.8e-28	3	5
ENSCSEP00000008540	zf-C2H2	PF00096.26	1.8e-28	4	5
ENSCSEP00000008540	zf-C2H2	PF00096.26	1.8e-28	5	5
ENSCSEP00000008543	zf-met	PF12874.7	2.3e-08	1	1
ENSCSEP00000008540	zf-met	PF12874.7	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008629	-	1791	-	ENSCSEP00000008540	596 (aa)	-	-
ENSCSET00000008632	-	2792	XM_017037735	ENSCSEP00000008543	589 (aa)	XP_016893224	UPI0007DCADD3

Gene Model

Click here to download ENSCSEG00000005456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000005456	si:ch211-79k12.2	52	48.765	ENSCSEG00000013398	-	86	49.587
ENSCSEG00000005456	si:ch211-79k12.2	53	48.921	ENSCSEG00000008502	-	70	48.252
ENSCSEG00000005456	si:ch211-79k12.2	60	39.130	ENSCSEG00000004721	-	63	42.754
ENSCSEG00000005456	si:ch211-79k12.2	54	40.191	ENSCSEG00000018535	-	81	47.134
ENSCSEG00000005456	si:ch211-79k12.2	50	37.436	ENSCSEG00000019848	-	54	38.235
ENSCSEG00000005456	si:ch211-79k12.2	54	45.283	ENSCSEG00000020696	-	98	45.342
ENSCSEG00000005456	si:ch211-79k12.2	52	42.683	ENSCSEG00000004210	-	96	46.212
ENSCSEG00000005456	si:ch211-79k12.2	51	47.863	ENSCSEG00000000356	znf648	99	47.863
ENSCSEG00000005456	si:ch211-79k12.2	54	42.336	ENSCSEG00000005974	-	94	39.552
ENSCSEG00000005456	si:ch211-79k12.2	52	46.341	ENSCSEG00000004273	-	71	46.108
ENSCSEG00000005456	si:ch211-79k12.2	53	49.315	ENSCSEG00000001748	-	97	48.092
ENSCSEG00000005456	si:ch211-79k12.2	52	40.909	ENSCSEG00000008903	-	80	41.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005456	si:ch211-79k12.2	55	39.779	ENSDARG00000089715	si:cabz01054394.7	72	44.512	Danio_rerio
ENSCSEG00000005456	si:ch211-79k12.2	98	59.222	ENSKMAG00000014002	si:ch211-79k12.2	80	84.393	Kryptolebias_marmoratus