EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000005479 (Gene tree)
Gene ID: 103380107
Gene Symbol: rabl2
Alias: si:dkeyp-1h4.2
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2634 bases
Position: chr6:11013957-11016590
Accession: 103380107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008589	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008686	-	645	XM_008311913	ENSCSEP00000008597	214 (aa)	XP_008310135	-
ENSCSET00000008678	-	680	-	ENSCSEP00000008589	224 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000005479	rabl2	68	30.573	ENSCSEG00000003122	rab6ba	75	30.573
ENSCSEG00000005479	rabl2	69	32.704	ENSCSEG00000016498	rab14	74	32.704
ENSCSEG00000005479	rabl2	70	36.025	ENSCSEG00000020977	-	79	36.025
ENSCSEG00000005479	rabl2	71	33.133	ENSCSEG00000002970	RAB7A	74	33.133
ENSCSEG00000005479	rabl2	71	35.928	ENSCSEG00000019183	si:dkey-34d22.5	74	36.145
ENSCSEG00000005479	rabl2	71	33.333	ENSCSEG00000019722	RAB39B	78	31.325
ENSCSEG00000005479	rabl2	70	31.707	ENSCSEG00000010582	rab42a	74	31.707
ENSCSEG00000005479	rabl2	62	31.250	ENSCSEG00000020348	rab33ba	61	31.250
ENSCSEG00000005479	rabl2	74	31.792	ENSCSEG00000011982	rab25b	80	31.792
ENSCSEG00000005479	rabl2	68	30.573	ENSCSEG00000004941	rab41	74	30.573
ENSCSEG00000005479	rabl2	71	31.928	ENSCSEG00000014467	rab9b	75	31.928
ENSCSEG00000005479	rabl2	78	31.844	ENSCSEG00000007292	rab30	88	31.844
ENSCSEG00000005479	rabl2	75	35.795	ENSCSEG00000007121	rab11ba	67	35.795
ENSCSEG00000005479	rabl2	70	35.404	ENSCSEG00000018732	rab1ba	81	35.404
ENSCSEG00000005479	rabl2	68	32.484	ENSCSEG00000017026	rab25a	74	32.484
ENSCSEG00000005479	rabl2	79	33.702	ENSCSEG00000017024	rab5c	82	33.702
ENSCSEG00000005479	rabl2	68	35.220	ENSCSEG00000014416	zgc:171927	73	35.220
ENSCSEG00000005479	rabl2	70	32.317	ENSCSEG00000002358	rab13	82	32.317
ENSCSEG00000005479	rabl2	72	30.539	ENSCSEG00000010402	-	76	30.723
ENSCSEG00000005479	rabl2	76	33.908	ENSCSEG00000011816	rab18a	84	33.908
ENSCSEG00000005479	rabl2	70	32.317	ENSCSEG00000017861	-	76	32.317
ENSCSEG00000005479	rabl2	85	35.204	ENSCSEG00000016803	rab18b	85	36.471
ENSCSEG00000005479	rabl2	72	35.882	ENSCSEG00000007239	-	77	35.882
ENSCSEG00000005479	rabl2	72	37.500	ENSCSEG00000007383	rab11a	78	37.500
ENSCSEG00000005479	rabl2	71	33.133	ENSCSEG00000010116	rab9a	78	33.133
ENSCSEG00000005479	rabl2	70	34.783	ENSCSEG00000011996	rab11al	81	35.032
ENSCSEG00000005479	rabl2	63	33.113	ENSCSEG00000014479	-	62	33.113
ENSCSEG00000005479	rabl2	71	33.133	ENSCSEG00000005357	-	80	33.133
ENSCSEG00000005479	rabl2	72	35.882	ENSCSEG00000012149	rab11bb	77	35.882
ENSCSEG00000005479	rabl2	71	30.864	ENSCSEG00000019797	rab22a	84	30.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005479	rabl2	97	73.272	ENSG00000144134	RABL2A	100	76.316	Homo_sapiens
ENSCSEG00000005479	rabl2	97	73.272	ENSG00000079974	RABL2B	100	76.768	Homo_sapiens
ENSCSEG00000005479	rabl2	95	90.610	ENSAPOG00000023708	rabl2	91	93.596	Acanthochromis_polyacanthus
ENSCSEG00000005479	rabl2	92	76.190	ENSAMEG00000003173	-	91	76.699	Ailuropoda_melanoleuca
ENSCSEG00000005479	rabl2	97	84.862	ENSACIG00000000670	rabl2	91	88.670	Amphilophus_citrinellus
ENSCSEG00000005479	rabl2	95	90.141	ENSAOCG00000008069	rabl2	91	93.103	Amphiprion_ocellaris
ENSCSEG00000005479	rabl2	95	90.610	ENSAPEG00000003164	rabl2	91	93.596	Amphiprion_percula
ENSCSEG00000005479	rabl2	97	89.908	ENSATEG00000001111	rabl2	91	94.089	Anabas_testudineus
ENSCSEG00000005479	rabl2	77	79.651	ENSACAG00000000418	-	97	79.651	Anolis_carolinensis
ENSCSEG00000005479	rabl2	95	71.831	ENSANAG00000021001	-	89	74.384	Aotus_nancymaae
ENSCSEG00000005479	rabl2	97	86.697	ENSACLG00000025632	rabl2	91	90.640	Astatotilapia_calliptera
ENSCSEG00000005479	rabl2	96	76.852	ENSAMXG00000040611	rabl2	91	80.198	Astyanax_mexicanus
ENSCSEG00000005479	rabl2	91	76.355	ENSBTAG00000004876	RABL2B	90	76.355	Bos_taurus
ENSCSEG00000005479	rabl2	93	75.481	ENSCJAG00000018414	-	85	77.320	Callithrix_jacchus
ENSCSEG00000005479	rabl2	96	73.611	ENSCAFG00020006938	-	91	75.369	Canis_lupus_dingo
ENSCSEG00000005479	rabl2	91	76.355	ENSCHIG00000000591	-	88	76.355	Capra_hircus
ENSCSEG00000005479	rabl2	92	74.272	ENSTSYG00000004323	-	89	74.384	Carlito_syrichta
ENSCSEG00000005479	rabl2	99	72.646	ENSCPOG00000026899	-	91	75.862	Cavia_porcellus
ENSCSEG00000005479	rabl2	93	75.481	ENSCCAG00000025944	-	89	75.862	Cebus_capucinus
ENSCSEG00000005479	rabl2	97	73.272	ENSCATG00000034307	-	89	74.384	Cercocebus_atys
ENSCSEG00000005479	rabl2	99	73.094	ENSCLAG00000017218	-	91	76.847	Chinchilla_lanigera
ENSCSEG00000005479	rabl2	97	72.811	ENSCSAG00000004698	-	88	75.369	Chlorocebus_sabaeus
ENSCSEG00000005479	rabl2	96	73.953	ENSCPBG00000011715	-	89	77.228	Chrysemys_picta_bellii
ENSCSEG00000005479	rabl2	79	71.910	ENSCING00000004961	-	86	69.730	Ciona_intestinalis
ENSCSEG00000005479	rabl2	80	71.111	ENSCSAVG00000006042	-	87	71.111	Ciona_savignyi
ENSCSEG00000005479	rabl2	97	72.811	ENSCANG00000030879	-	89	74.384	Colobus_angolensis_palliatus
ENSCSEG00000005479	rabl2	96	73.488	ENSCGRG00001021894	Rabl2	91	74.877	Cricetulus_griseus_chok1gshd
ENSCSEG00000005479	rabl2	96	85.514	ENSCVAG00000011432	rabl2	90	89.899	Cyprinodon_variegatus
ENSCSEG00000005479	rabl2	95	74.648	ENSDARG00000063321	rabl2	91	78.392	Danio_rerio
ENSCSEG00000005479	rabl2	98	73.516	ENSDNOG00000035151	-	91	77.340	Dasypus_novemcinctus
ENSCSEG00000005479	rabl2	93	75.962	ENSDORG00000000003	Rabl2	91	76.355	Dipodomys_ordii
ENSCSEG00000005479	rabl2	97	75.115	ENSEASG00005008239	-	91	77.340	Equus_asinus_asinus
ENSCSEG00000005479	rabl2	97	74.312	ENSECAG00000026942	-	91	77.340	Equus_caballus
ENSCSEG00000005479	rabl2	92	76.329	ENSFCAG00000033642	-	91	76.847	Felis_catus
ENSCSEG00000005479	rabl2	96	74.884	ENSFDAG00000002113	-	91	76.733	Fukomys_damarensis
ENSCSEG00000005479	rabl2	95	90.094	ENSFHEG00000015015	rabl2	77	91.626	Fundulus_heteroclitus
ENSCSEG00000005479	rabl2	88	87.817	ENSGMOG00000018928	rabl2	100	87.817	Gadus_morhua
ENSCSEG00000005479	rabl2	88	78.571	ENSGALG00000032458	RABL2B	83	81.183	Gallus_gallus
ENSCSEG00000005479	rabl2	90	89.055	ENSGAFG00000005188	rabl2	91	89.109	Gambusia_affinis
ENSCSEG00000005479	rabl2	98	83.562	ENSGACG00000012474	rabl2	92	88.670	Gasterosteus_aculeatus
ENSCSEG00000005479	rabl2	97	87.156	ENSHBUG00000010964	rabl2	91	91.133	Haplochromis_burtoni
ENSCSEG00000005479	rabl2	97	73.272	ENSHGLG00000005750	-	91	76.355	Heterocephalus_glaber_female
ENSCSEG00000005479	rabl2	97	73.272	ENSHGLG00100016281	-	91	76.355	Heterocephalus_glaber_male
ENSCSEG00000005479	rabl2	96	74.074	ENSSTOG00000002723	-	91	76.847	Ictidomys_tridecemlineatus
ENSCSEG00000005479	rabl2	98	70.455	ENSJJAG00000010792	Rabl2	91	73.892	Jaculus_jaculus
ENSCSEG00000005479	rabl2	97	86.239	ENSKMAG00000012723	rabl2	91	89.655	Kryptolebias_marmoratus
ENSCSEG00000005479	rabl2	94	90.521	ENSLBEG00000003644	rabl2	91	92.118	Labrus_bergylta
ENSCSEG00000005479	rabl2	96	78.972	ENSLACG00000003722	rabl2	90	81.683	Latimeria_chalumnae
ENSCSEG00000005479	rabl2	95	78.302	ENSLOCG00000016767	rabl2	90	81.773	Lepisosteus_oculatus
ENSCSEG00000005479	rabl2	97	73.733	ENSMFAG00000044775	-	89	75.369	Macaca_fascicularis
ENSCSEG00000005479	rabl2	97	73.733	ENSMMUG00000022914	RABL2B	89	75.369	Macaca_mulatta
ENSCSEG00000005479	rabl2	97	73.272	ENSMNEG00000028460	-	89	74.877	Macaca_nemestrina
ENSCSEG00000005479	rabl2	97	72.350	ENSMLEG00000032621	-	89	73.892	Mandrillus_leucophaeus
ENSCSEG00000005479	rabl2	97	90.367	ENSMAMG00000008168	rabl2	91	93.596	Mastacembelus_armatus
ENSCSEG00000005479	rabl2	96	86.449	ENSMZEG00005019758	rabl2	91	91.371	Maylandia_zebra
ENSCSEG00000005479	rabl2	97	73.272	ENSMAUG00000010955	Rabl2	91	75.369	Mesocricetus_auratus
ENSCSEG00000005479	rabl2	96	74.884	ENSMICG00000031301	-	89	76.847	Microcebus_murinus
ENSCSEG00000005479	rabl2	99	72.523	ENSMOCG00000002775	Rabl2	91	74.384	Microtus_ochrogaster
ENSCSEG00000005479	rabl2	95	75.234	ENSMODG00000010838	-	90	78.788	Monodelphis_domestica
ENSCSEG00000005479	rabl2	97	87.558	ENSMALG00000005944	rabl2	91	91.133	Monopterus_albus
ENSCSEG00000005479	rabl2	95	71.831	MGP_CAROLIEiJ_G0020176	Rabl2	90	74.384	Mus_caroli
ENSCSEG00000005479	rabl2	95	71.831	ENSMUSG00000022621	Rabl2	91	74.384	Mus_musculus
ENSCSEG00000005479	rabl2	95	72.300	MGP_PahariEiJ_G0020181	Rabl2	91	74.877	Mus_pahari
ENSCSEG00000005479	rabl2	95	71.831	MGP_SPRETEiJ_G0021073	Rabl2	91	74.384	Mus_spretus
ENSCSEG00000005479	rabl2	92	75.362	ENSMPUG00000001806	-	91	75.862	Mustela_putorius_furo
ENSCSEG00000005479	rabl2	99	70.404	ENSNGAG00000012843	Rabl2	88	74.384	Nannospalax_galili
ENSCSEG00000005479	rabl2	97	87.615	ENSNBRG00000000489	rabl2	91	91.626	Neolamprologus_brichardi
ENSCSEG00000005479	rabl2	96	73.488	ENSNLEG00000030435	-	89	75.369	Nomascus_leucogenys
ENSCSEG00000005479	rabl2	93	75.481	ENSODEG00000015650	-	91	76.355	Octodon_degus
ENSCSEG00000005479	rabl2	97	87.615	ENSONIG00000014885	rabl2	91	91.626	Oreochromis_niloticus
ENSCSEG00000005479	rabl2	93	82.297	ENSORLG00000009874	rabl2	90	83.251	Oryzias_latipes
ENSCSEG00000005479	rabl2	93	82.297	ENSORLG00020001721	rabl2	90	83.251	Oryzias_latipes_hni
ENSCSEG00000005479	rabl2	93	82.297	ENSORLG00015014268	rabl2	90	83.251	Oryzias_latipes_hsok
ENSCSEG00000005479	rabl2	93	83.732	ENSOMEG00000008576	rabl2	93	85.149	Oryzias_melastigma
ENSCSEG00000005479	rabl2	92	77.295	ENSOGAG00000009123	-	89	77.833	Otolemur_garnettii
ENSCSEG00000005479	rabl2	92	75.120	ENSPPRG00000014642	-	90	75.610	Panthera_pardus
ENSCSEG00000005479	rabl2	92	76.329	ENSPTIG00000018747	-	91	76.847	Panthera_tigris_altaica
ENSCSEG00000005479	rabl2	94	70.136	ENSPTRG00000014555	-	89	71.362	Pan_troglodytes
ENSCSEG00000005479	rabl2	97	69.604	ENSPANG00000036121	-	89	70.892	Papio_anubis
ENSCSEG00000005479	rabl2	99	76.786	ENSPKIG00000025372	rabl2	91	80.882	Paramormyrops_kingsleyae
ENSCSEG00000005479	rabl2	96	73.611	ENSPSIG00000014041	-	88	78.173	Pelodiscus_sinensis
ENSCSEG00000005479	rabl2	88	84.264	ENSPMGG00000012946	rabl2	96	84.264	Periophthalmus_magnuspinnatus
ENSCSEG00000005479	rabl2	93	74.038	ENSPEMG00000024045	Rabl2	91	74.877	Peromyscus_maniculatus_bairdii
ENSCSEG00000005479	rabl2	87	77.949	ENSPCIG00000012436	-	82	76.238	Phascolarctos_cinereus
ENSCSEG00000005479	rabl2	94	87.793	ENSPFOG00000017960	rabl2	92	88.780	Poecilia_formosa
ENSCSEG00000005479	rabl2	94	88.626	ENSPLAG00000015685	rabl2	92	89.655	Poecilia_latipinna
ENSCSEG00000005479	rabl2	94	88.626	ENSPMEG00000004703	rabl2	92	89.655	Poecilia_mexicana
ENSCSEG00000005479	rabl2	88	90.863	ENSPREG00000014761	rabl2	96	90.863	Poecilia_reticulata
ENSCSEG00000005479	rabl2	93	76.442	ENSPPYG00000012000	-	85	78.866	Pongo_abelii
ENSCSEG00000005479	rabl2	96	76.279	ENSPCOG00000024865	-	89	78.325	Propithecus_coquereli
ENSCSEG00000005479	rabl2	92	71.689	ENSPVAG00000004539	-	90	72.093	Pteropus_vampyrus
ENSCSEG00000005479	rabl2	97	87.156	ENSPNYG00000004845	rabl2	91	91.133	Pundamilia_nyererei
ENSCSEG00000005479	rabl2	90	80.597	ENSPNAG00000024254	rabl2	91	80.693	Pygocentrus_nattereri
ENSCSEG00000005479	rabl2	96	73.023	ENSRNOG00000013947	Rabl2	81	74.877	Rattus_norvegicus
ENSCSEG00000005479	rabl2	97	73.272	ENSRBIG00000033607	-	89	74.877	Rhinopithecus_bieti
ENSCSEG00000005479	rabl2	97	73.733	ENSRROG00000031130	-	89	75.369	Rhinopithecus_roxellana
ENSCSEG00000005479	rabl2	97	73.733	ENSSBOG00000033266	-	89	75.862	Saimiri_boliviensis_boliviensis
ENSCSEG00000005479	rabl2	90	80.693	ENSSFOG00015020738	rabl2	91	80.693	Scleropages_formosus
ENSCSEG00000005479	rabl2	98	87.727	ENSSMAG00000004606	rabl2	91	92.611	Scophthalmus_maximus
ENSCSEG00000005479	rabl2	97	88.991	ENSSDUG00000014765	rabl2	91	93.596	Seriola_dumerili
ENSCSEG00000005479	rabl2	76	78.235	ENSSSCG00000025041	-	100	78.235	Sus_scrofa
ENSCSEG00000005479	rabl2	85	76.316	ENSTGUG00000016028	-	89	78.378	Taeniopygia_guttata
ENSCSEG00000005479	rabl2	97	86.697	ENSTRUG00000012454	rabl2	91	90.640	Takifugu_rubripes
ENSCSEG00000005479	rabl2	97	87.156	ENSTNIG00000017951	rabl2	91	91.133	Tetraodon_nigroviridis
ENSCSEG00000005479	rabl2	90	77.228	ENSUAMG00000015761	-	90	77.228	Ursus_americanus
ENSCSEG00000005479	rabl2	97	74.771	ENSUMAG00000017116	-	91	77.833	Ursus_maritimus
ENSCSEG00000005479	rabl2	96	73.611	ENSVVUG00000025761	-	91	75.743	Vulpes_vulpes
ENSCSEG00000005479	rabl2	97	74.312	ENSXETG00000015712	rabl2b	90	76.847	Xenopus_tropicalis
ENSCSEG00000005479	rabl2	91	90.148	ENSXMAG00000004569	rabl2	91	90.148	Xiphophorus_maculatus