EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005594 (Gene tree)
Gene ID: 103381317
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4059 bases
Position: chr7:13209955-13214013
Accession: 103381317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008746	HAT	PF02184.16	6.2e-38	1	2
ENSCSEP00000008746	HAT	PF02184.16	6.2e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008838	-	2370	XM_008313607	ENSCSEP00000008746	789 (aa)	XP_008311829	UPI00049507E0

Gene Model

Click here to download ENSCSEG00000005594's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005594	crnkl1	86	85.862	ENSG00000101343	CRNKL1	99	85.862	Homo_sapiens
ENSCSEG00000005594	crnkl1	91	91.123	ENSAPOG00000009705	crnkl1	98	93.796	Acanthochromis_polyacanthus
ENSCSEG00000005594	crnkl1	85	86.269	ENSAMEG00000000270	CRNKL1	82	86.370	Ailuropoda_melanoleuca
ENSCSEG00000005594	crnkl1	96	84.717	ENSACIG00000015267	crnkl1	99	84.321	Amphilophus_citrinellus
ENSCSEG00000005594	crnkl1	91	91.286	ENSAOCG00000021964	crnkl1	99	84.829	Amphiprion_ocellaris
ENSCSEG00000005594	crnkl1	91	90.871	ENSAPEG00000015041	crnkl1	99	84.171	Amphiprion_percula
ENSCSEG00000005594	crnkl1	91	84.231	ENSATEG00000001068	crnkl1	99	82.058	Anabas_testudineus
ENSCSEG00000005594	crnkl1	86	84.467	ENSAPLG00000013105	CRNKL1	98	84.320	Anas_platyrhynchos
ENSCSEG00000005594	crnkl1	87	85.239	ENSACAG00000005284	CRNKL1	97	87.556	Anolis_carolinensis
ENSCSEG00000005594	crnkl1	80	86.349	ENSANAG00000024889	CRNKL1	99	86.349	Aotus_nancymaae
ENSCSEG00000005594	crnkl1	96	84.585	ENSACLG00000010813	crnkl1	98	85.013	Astatotilapia_calliptera
ENSCSEG00000005594	crnkl1	93	84.239	ENSAMXG00000018334	crnkl1	91	89.766	Astyanax_mexicanus
ENSCSEG00000005594	crnkl1	88	84.971	ENSBTAG00000008472	CRNKL1	98	86.009	Bos_taurus
ENSCSEG00000005594	crnkl1	81	63.608	WBGene00019762	M03F8.3	98	58.378	Caenorhabditis_elegans
ENSCSEG00000005594	crnkl1	85	86.310	ENSCJAG00000005393	CRNKL1	98	86.310	Callithrix_jacchus
ENSCSEG00000005594	crnkl1	85	86.269	ENSCAFG00000005333	CRNKL1	93	86.370	Canis_familiaris
ENSCSEG00000005594	crnkl1	86	86.370	ENSCAFG00020027488	CRNKL1	98	86.370	Canis_lupus_dingo
ENSCSEG00000005594	crnkl1	88	83.960	ENSCHIG00000013171	CRNKL1	97	85.970	Capra_hircus
ENSCSEG00000005594	crnkl1	86	85.926	ENSTSYG00000004197	CRNKL1	98	85.926	Carlito_syrichta
ENSCSEG00000005594	crnkl1	82	83.200	ENSCAPG00000010501	CRNKL1	98	84.539	Cavia_aperea
ENSCSEG00000005594	crnkl1	86	85.778	ENSCPOG00000004418	CRNKL1	98	85.778	Cavia_porcellus
ENSCSEG00000005594	crnkl1	85	86.310	ENSCCAG00000027037	CRNKL1	99	85.862	Cebus_capucinus
ENSCSEG00000005594	crnkl1	86	85.714	ENSCATG00000034247	CRNKL1	99	85.714	Cercocebus_atys
ENSCSEG00000005594	crnkl1	86	86.222	ENSCLAG00000013859	CRNKL1	98	86.222	Chinchilla_lanigera
ENSCSEG00000005594	crnkl1	86	85.714	ENSCSAG00000011434	CRNKL1	99	85.714	Chlorocebus_sabaeus
ENSCSEG00000005594	crnkl1	85	85.991	ENSCHOG00000006371	CRNKL1	82	85.926	Choloepus_hoffmanni
ENSCSEG00000005594	crnkl1	85	88.077	ENSCPBG00000023501	CRNKL1	98	88.077	Chrysemys_picta_bellii
ENSCSEG00000005594	crnkl1	84	68.825	ENSCING00000002709	-	99	67.153	Ciona_intestinalis
ENSCSEG00000005594	crnkl1	86	85.714	ENSCANG00000038789	CRNKL1	99	85.714	Colobus_angolensis_palliatus
ENSCSEG00000005594	crnkl1	87	85.153	ENSCGRG00001001115	-	98	86.222	Cricetulus_griseus_chok1gshd
ENSCSEG00000005594	crnkl1	87	85.153	ENSCGRG00001000687	-	98	86.222	Cricetulus_griseus_chok1gshd
ENSCSEG00000005594	crnkl1	87	85.153	ENSCGRG00000007854	Crnkl1	98	86.222	Cricetulus_griseus_crigri
ENSCSEG00000005594	crnkl1	98	94.012	ENSCVAG00000015172	crnkl1	90	93.601	Cyprinodon_variegatus
ENSCSEG00000005594	crnkl1	99	91.101	ENSDARG00000007901	crnkl1	98	81.735	Danio_rerio
ENSCSEG00000005594	crnkl1	87	85.029	ENSDNOG00000016226	CRNKL1	94	86.370	Dasypus_novemcinctus
ENSCSEG00000005594	crnkl1	86	83.700	ENSDORG00000000394	-	98	83.700	Dipodomys_ordii
ENSCSEG00000005594	crnkl1	84	79.160	ENSDORG00000030174	-	99	79.160	Dipodomys_ordii
ENSCSEG00000005594	crnkl1	84	80.000	ENSDORG00000023724	-	98	80.000	Dipodomys_ordii
ENSCSEG00000005594	crnkl1	86	67.930	FBgn0000377	crn	96	68.703	Drosophila_melanogaster
ENSCSEG00000005594	crnkl1	86	75.556	ENSETEG00000003711	CRNKL1	82	75.556	Echinops_telfairi
ENSCSEG00000005594	crnkl1	88	59.188	ENSEBUG00000013461	crnkl1	94	57.036	Eptatretus_burgeri
ENSCSEG00000005594	crnkl1	87	85.444	ENSEASG00005002072	CRNKL1	98	86.370	Equus_asinus_asinus
ENSCSEG00000005594	crnkl1	87	85.444	ENSECAG00000022215	CRNKL1	98	86.370	Equus_caballus
ENSCSEG00000005594	crnkl1	85	83.881	ENSEEUG00000000413	CRNKL1	91	84.000	Erinaceus_europaeus
ENSCSEG00000005594	crnkl1	99	91.004	ENSELUG00000015424	crnkl1	94	91.004	Esox_lucius
ENSCSEG00000005594	crnkl1	86	86.370	ENSFCAG00000000714	CRNKL1	98	86.370	Felis_catus
ENSCSEG00000005594	crnkl1	84	85.650	ENSFALG00000004611	CRNKL1	99	85.650	Ficedula_albicollis
ENSCSEG00000005594	crnkl1	86	86.519	ENSFDAG00000000604	CRNKL1	98	86.519	Fukomys_damarensis
ENSCSEG00000005594	crnkl1	85	93.611	ENSFHEG00000013163	crnkl1	93	89.013	Fundulus_heteroclitus
ENSCSEG00000005594	crnkl1	98	89.222	ENSGMOG00000007609	crnkl1	93	88.707	Gadus_morhua
ENSCSEG00000005594	crnkl1	86	86.834	ENSGALG00000008429	CRNKL1	99	86.834	Gallus_gallus
ENSCSEG00000005594	crnkl1	85	93.145	ENSGAFG00000014249	crnkl1	94	88.703	Gambusia_affinis
ENSCSEG00000005594	crnkl1	91	87.673	ENSGACG00000011852	crnkl1	98	86.122	Gasterosteus_aculeatus
ENSCSEG00000005594	crnkl1	82	85.913	ENSGAGG00000021233	CRNKL1	98	86.101	Gopherus_agassizii
ENSCSEG00000005594	crnkl1	86	85.862	ENSGGOG00000014176	CRNKL1	99	85.862	Gorilla_gorilla
ENSCSEG00000005594	crnkl1	97	84.615	ENSHBUG00000005246	crnkl1	99	83.143	Haplochromis_burtoni
ENSCSEG00000005594	crnkl1	86	86.370	ENSHGLG00000010856	CRNKL1	98	86.370	Heterocephalus_glaber_female
ENSCSEG00000005594	crnkl1	86	86.370	ENSHGLG00100011521	CRNKL1	98	86.370	Heterocephalus_glaber_male
ENSCSEG00000005594	crnkl1	85	90.855	ENSHCOG00000006420	crnkl1	97	89.956	Hippocampus_comes
ENSCSEG00000005594	crnkl1	86	75.221	ENSIPUG00000006836	-	99	75.516	Ictalurus_punctatus
ENSCSEG00000005594	crnkl1	82	88.752	ENSIPUG00000006751	crnkl1	98	83.475	Ictalurus_punctatus
ENSCSEG00000005594	crnkl1	80	70.597	ENSIPUG00000000315	-	99	71.654	Ictalurus_punctatus
ENSCSEG00000005594	crnkl1	87	84.862	ENSSTOG00000014747	CRNKL1	98	85.778	Ictidomys_tridecemlineatus
ENSCSEG00000005594	crnkl1	85	84.257	ENSJJAG00000016926	Crnkl1	98	84.257	Jaculus_jaculus
ENSCSEG00000005594	crnkl1	89	90.638	ENSKMAG00000003620	crnkl1	96	85.695	Kryptolebias_marmoratus
ENSCSEG00000005594	crnkl1	85	76.226	ENSLBEG00000003543	crnkl1	90	75.405	Labrus_bergylta
ENSCSEG00000005594	crnkl1	86	87.500	ENSLACG00000001129	CRNKL1	99	87.500	Latimeria_chalumnae
ENSCSEG00000005594	crnkl1	98	91.429	ENSLOCG00000016889	crnkl1	95	89.474	Lepisosteus_oculatus
ENSCSEG00000005594	crnkl1	86	85.503	ENSLAFG00000004512	CRNKL1	98	86.243	Loxodonta_africana
ENSCSEG00000005594	crnkl1	86	85.714	ENSMFAG00000039893	CRNKL1	99	85.714	Macaca_fascicularis
ENSCSEG00000005594	crnkl1	86	85.714	ENSMMUG00000007709	CRNKL1	99	85.714	Macaca_mulatta
ENSCSEG00000005594	crnkl1	86	85.714	ENSMNEG00000037490	CRNKL1	99	85.714	Macaca_nemestrina
ENSCSEG00000005594	crnkl1	86	85.714	ENSMLEG00000034885	CRNKL1	99	85.714	Mandrillus_leucophaeus
ENSCSEG00000005594	crnkl1	96	86.016	ENSMAMG00000008757	crnkl1	100	86.184	Mastacembelus_armatus
ENSCSEG00000005594	crnkl1	91	88.488	ENSMZEG00005022345	crnkl1	99	85.146	Maylandia_zebra
ENSCSEG00000005594	crnkl1	86	86.263	ENSMGAG00000003452	CRNKL1	93	86.263	Meleagris_gallopavo
ENSCSEG00000005594	crnkl1	87	85.298	ENSMAUG00000020764	Crnkl1	98	86.370	Mesocricetus_auratus
ENSCSEG00000005594	crnkl1	86	86.074	ENSMICG00000006048	CRNKL1	98	86.074	Microcebus_murinus
ENSCSEG00000005594	crnkl1	84	61.747	ENSMOCG00000004179	-	99	60.637	Microtus_ochrogaster
ENSCSEG00000005594	crnkl1	87	77.110	ENSMOCG00000000681	-	98	78.020	Microtus_ochrogaster
ENSCSEG00000005594	crnkl1	80	90.981	ENSMMOG00000017601	crnkl1	97	90.981	Mola_mola
ENSCSEG00000005594	crnkl1	86	80.296	ENSMODG00000010857	-	98	80.296	Monodelphis_domestica
ENSCSEG00000005594	crnkl1	86	83.528	ENSMODG00000005961	-	98	83.528	Monodelphis_domestica
ENSCSEG00000005594	crnkl1	96	60.343	ENSMALG00000011211	crnkl1	99	68.942	Monopterus_albus
ENSCSEG00000005594	crnkl1	87	84.928	MGP_CAROLIEiJ_G0024394	Crnkl1	98	86.095	Mus_caroli
ENSCSEG00000005594	crnkl1	87	84.862	ENSMUSG00000001767	Crnkl1	98	85.926	Mus_musculus
ENSCSEG00000005594	crnkl1	87	83.552	MGP_PahariEiJ_G0025838	Crnkl1	98	84.593	Mus_pahari
ENSCSEG00000005594	crnkl1	87	84.862	MGP_SPRETEiJ_G0025312	Crnkl1	98	85.926	Mus_spretus
ENSCSEG00000005594	crnkl1	86	86.370	ENSMPUG00000001226	CRNKL1	98	86.370	Mustela_putorius_furo
ENSCSEG00000005594	crnkl1	85	85.842	ENSMLUG00000016513	CRNKL1	88	85.947	Myotis_lucifugus
ENSCSEG00000005594	crnkl1	86	83.721	ENSNGAG00000023097	Crnkl1	98	83.721	Nannospalax_galili
ENSCSEG00000005594	crnkl1	98	84.675	ENSNBRG00000007867	crnkl1	98	84.921	Neolamprologus_brichardi
ENSCSEG00000005594	crnkl1	86	83.063	ENSNLEG00000009862	CRNKL1	99	83.063	Nomascus_leucogenys
ENSCSEG00000005594	crnkl1	87	79.767	ENSMEUG00000002361	-	99	80.441	Notamacropus_eugenii
ENSCSEG00000005594	crnkl1	85	85.268	ENSMEUG00000012167	-	99	86.212	Notamacropus_eugenii
ENSCSEG00000005594	crnkl1	65	58.721	ENSOPRG00000009242	-	61	58.721	Ochotona_princeps
ENSCSEG00000005594	crnkl1	86	86.074	ENSODEG00000012175	CRNKL1	98	86.074	Octodon_degus
ENSCSEG00000005594	crnkl1	96	84.848	ENSONIG00000018728	crnkl1	98	84.921	Oreochromis_niloticus
ENSCSEG00000005594	crnkl1	86	84.536	ENSOCUG00000015484	CRNKL1	82	85.234	Oryctolagus_cuniculus
ENSCSEG00000005594	crnkl1	90	88.062	ENSORLG00000017240	crnkl1	100	83.663	Oryzias_latipes
ENSCSEG00000005594	crnkl1	90	87.570	ENSORLG00020001742	crnkl1	100	83.926	Oryzias_latipes_hni
ENSCSEG00000005594	crnkl1	90	87.709	ENSORLG00015019564	crnkl1	100	83.794	Oryzias_latipes_hsok
ENSCSEG00000005594	crnkl1	91	88.211	ENSOMEG00000019895	crnkl1	99	84.881	Oryzias_melastigma
ENSCSEG00000005594	crnkl1	86	85.926	ENSOGAG00000011544	CRNKL1	98	85.926	Otolemur_garnettii
ENSCSEG00000005594	crnkl1	87	84.862	ENSOARG00000002150	CRNKL1	87	87.015	Ovis_aries
ENSCSEG00000005594	crnkl1	85	84.718	ENSPPAG00000027847	CRNKL1	82	84.831	Pan_paniscus
ENSCSEG00000005594	crnkl1	86	86.370	ENSPPRG00000001955	CRNKL1	98	86.370	Panthera_pardus
ENSCSEG00000005594	crnkl1	86	86.370	ENSPTIG00000007393	CRNKL1	98	86.370	Panthera_tigris_altaica
ENSCSEG00000005594	crnkl1	86	85.862	ENSPTRG00000030609	CRNKL1	99	85.862	Pan_troglodytes
ENSCSEG00000005594	crnkl1	86	85.714	ENSPANG00000017420	CRNKL1	99	85.714	Papio_anubis
ENSCSEG00000005594	crnkl1	84	85.135	ENSPKIG00000017093	crnkl1	89	83.895	Paramormyrops_kingsleyae
ENSCSEG00000005594	crnkl1	85	86.826	ENSPSIG00000012705	CRNKL1	97	86.826	Pelodiscus_sinensis
ENSCSEG00000005594	crnkl1	99	83.838	ENSPMGG00000006263	crnkl1	97	83.528	Periophthalmus_magnuspinnatus
ENSCSEG00000005594	crnkl1	87	85.153	ENSPEMG00000000073	-	98	86.222	Peromyscus_maniculatus_bairdii
ENSCSEG00000005594	crnkl1	85	82.934	ENSPMAG00000002250	crnkl1	97	82.934	Petromyzon_marinus
ENSCSEG00000005594	crnkl1	86	85.820	ENSPCIG00000025825	CRNKL1	94	85.820	Phascolarctos_cinereus
ENSCSEG00000005594	crnkl1	90	88.999	ENSPFOG00000005102	crnkl1	100	84.941	Poecilia_formosa
ENSCSEG00000005594	crnkl1	85	93.145	ENSPLAG00000007288	crnkl1	93	88.350	Poecilia_latipinna
ENSCSEG00000005594	crnkl1	85	93.294	ENSPMEG00000008865	crnkl1	97	88.611	Poecilia_mexicana
ENSCSEG00000005594	crnkl1	98	93.413	ENSPREG00000012615	crnkl1	100	84.921	Poecilia_reticulata
ENSCSEG00000005594	crnkl1	85	85.608	ENSPPYG00000010747	CRNKL1	80	85.714	Pongo_abelii
ENSCSEG00000005594	crnkl1	85	81.343	ENSPCAG00000003296	CRNKL1	84	81.481	Procavia_capensis
ENSCSEG00000005594	crnkl1	85	84.776	ENSPCOG00000017608	CRNKL1	82	84.889	Propithecus_coquereli
ENSCSEG00000005594	crnkl1	85	86.161	ENSPVAG00000006207	CRNKL1	82	86.263	Pteropus_vampyrus
ENSCSEG00000005594	crnkl1	100	82.383	ENSPNYG00000001977	crnkl1	99	84.808	Pundamilia_nyererei
ENSCSEG00000005594	crnkl1	88	87.948	ENSPNAG00000001507	crnkl1	96	87.221	Pygocentrus_nattereri
ENSCSEG00000005594	crnkl1	87	84.716	ENSRNOG00000040045	Crnkl1	98	85.778	Rattus_norvegicus
ENSCSEG00000005594	crnkl1	87	84.862	ENSRNOG00000010587	Crnkl1	98	85.926	Rattus_norvegicus
ENSCSEG00000005594	crnkl1	86	85.714	ENSRBIG00000031770	CRNKL1	99	85.714	Rhinopithecus_bieti
ENSCSEG00000005594	crnkl1	86	85.862	ENSRROG00000040450	CRNKL1	99	85.862	Rhinopithecus_roxellana
ENSCSEG00000005594	crnkl1	82	36.903	YLR117C	CLF1	99	36.903	Saccharomyces_cerevisiae
ENSCSEG00000005594	crnkl1	85	86.310	ENSSBOG00000029672	CRNKL1	99	85.862	Saimiri_boliviensis_boliviensis
ENSCSEG00000005594	crnkl1	83	70.015	ENSSHAG00000011199	CRNKL1	99	70.015	Sarcophilus_harrisii
ENSCSEG00000005594	crnkl1	84	90.498	ENSSFOG00015000946	crnkl1	98	81.686	Scleropages_formosus
ENSCSEG00000005594	crnkl1	96	85.770	ENSSMAG00000007933	crnkl1	97	85.583	Scophthalmus_maximus
ENSCSEG00000005594	crnkl1	89	85.149	ENSSDUG00000012625	crnkl1	97	80.871	Seriola_dumerili
ENSCSEG00000005594	crnkl1	89	93.050	ENSSLDG00000021413	crnkl1	98	85.967	Seriola_lalandi_dorsalis
ENSCSEG00000005594	crnkl1	86	85.333	ENSSARG00000006443	CRNKL1	81	85.333	Sorex_araneus
ENSCSEG00000005594	crnkl1	86	86.834	ENSSPUG00000005254	CRNKL1	99	86.834	Sphenodon_punctatus
ENSCSEG00000005594	crnkl1	100	90.430	ENSSPAG00000016150	crnkl1	97	85.864	Stegastes_partitus
ENSCSEG00000005594	crnkl1	88	84.993	ENSSSCG00000038587	CRNKL1	97	86.866	Sus_scrofa
ENSCSEG00000005594	crnkl1	86	86.115	ENSTGUG00000007645	CRNKL1	97	86.115	Taeniopygia_guttata
ENSCSEG00000005594	crnkl1	85	85.501	ENSTRUG00000015417	crnkl1	91	84.480	Takifugu_rubripes
ENSCSEG00000005594	crnkl1	85	89.521	ENSTNIG00000010710	crnkl1	97	89.521	Tetraodon_nigroviridis
ENSCSEG00000005594	crnkl1	79	84.640	ENSTBEG00000001304	CRNKL1	82	84.762	Tupaia_belangeri
ENSCSEG00000005594	crnkl1	79	82.240	ENSTTRG00000000484	CRNKL1	81	82.381	Tursiops_truncatus
ENSCSEG00000005594	crnkl1	86	86.370	ENSUAMG00000018586	CRNKL1	98	86.370	Ursus_americanus
ENSCSEG00000005594	crnkl1	86	86.370	ENSUMAG00000024957	CRNKL1	98	86.370	Ursus_maritimus
ENSCSEG00000005594	crnkl1	85	86.269	ENSVVUG00000012559	CRNKL1	81	86.370	Vulpes_vulpes
ENSCSEG00000005594	crnkl1	87	85.320	ENSXETG00000009698	crnkl1	99	86.156	Xenopus_tropicalis
ENSCSEG00000005594	crnkl1	85	91.964	ENSXCOG00000000824	crnkl1	99	81.679	Xiphophorus_couchianus
ENSCSEG00000005594	crnkl1	85	93.145	ENSXMAG00000006896	crnkl1	99	82.548	Xiphophorus_maculatus