EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000005628 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4975 bases
Position: chr7:13251672-13256646
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008800	XRN_N	PF03159.18	6.1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000008898	-	1491	-	ENSCSEP00000008800	496 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000005628	xrn2	84	39.857	ENSCSEG00000021285	xrn1	93	50.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005628	xrn2	100	72.157	ENSG00000088930	XRN2	54	72.157	Homo_sapiens
ENSCSEG00000005628	xrn2	100	80.077	ENSAPOG00000009818	xrn2	53	81.044	Acanthochromis_polyacanthus
ENSCSEG00000005628	xrn2	100	72.353	ENSAMEG00000012581	XRN2	54	72.353	Ailuropoda_melanoleuca
ENSCSEG00000005628	xrn2	100	80.777	ENSACIG00000015047	xrn2	94	80.934	Amphilophus_citrinellus
ENSCSEG00000005628	xrn2	100	80.658	ENSAOCG00000023632	xrn2	53	80.851	Amphiprion_ocellaris
ENSCSEG00000005628	xrn2	100	80.464	ENSAPEG00000014871	xrn2	53	80.658	Amphiprion_percula
ENSCSEG00000005628	xrn2	100	80.806	ENSATEG00000001273	xrn2	54	82.342	Anabas_testudineus
ENSCSEG00000005628	xrn2	95	73.196	ENSAPLG00000013869	XRN2	52	73.196	Anas_platyrhynchos
ENSCSEG00000005628	xrn2	100	71.150	ENSACAG00000005565	XRN2	53	71.150	Anolis_carolinensis
ENSCSEG00000005628	xrn2	100	72.157	ENSANAG00000020126	XRN2	55	72.157	Aotus_nancymaae
ENSCSEG00000005628	xrn2	100	76.641	ENSACLG00000010522	xrn2	96	77.500	Astatotilapia_calliptera
ENSCSEG00000005628	xrn2	100	78.503	ENSAMXG00000018301	xrn2	54	77.159	Astyanax_mexicanus
ENSCSEG00000005628	xrn2	100	72.157	ENSBTAG00000011304	XRN2	55	72.157	Bos_taurus
ENSCSEG00000005628	xrn2	100	72.157	ENSCJAG00000005611	XRN2	55	72.157	Callithrix_jacchus
ENSCSEG00000005628	xrn2	100	72.353	ENSCAFG00000005185	XRN2	54	72.353	Canis_familiaris
ENSCSEG00000005628	xrn2	100	72.353	ENSCAFG00020027479	XRN2	54	72.353	Canis_lupus_dingo
ENSCSEG00000005628	xrn2	100	71.569	ENSCHIG00000006921	XRN2	54	71.569	Capra_hircus
ENSCSEG00000005628	xrn2	100	72.495	ENSTSYG00000008315	XRN2	54	72.495	Carlito_syrichta
ENSCSEG00000005628	xrn2	100	72.549	ENSCPOG00000009407	XRN2	54	72.549	Cavia_porcellus
ENSCSEG00000005628	xrn2	100	72.157	ENSCATG00000040350	XRN2	54	72.157	Cercocebus_atys
ENSCSEG00000005628	xrn2	100	72.549	ENSCLAG00000013419	XRN2	54	72.549	Chinchilla_lanigera
ENSCSEG00000005628	xrn2	100	72.157	ENSCSAG00000011094	XRN2	54	72.157	Chlorocebus_sabaeus
ENSCSEG00000005628	xrn2	100	74.023	ENSCPBG00000023533	XRN2	53	74.219	Chrysemys_picta_bellii
ENSCSEG00000005628	xrn2	97	60.241	ENSCING00000022336	-	61	59.064	Ciona_intestinalis
ENSCSEG00000005628	xrn2	99	58.600	ENSCSAVG00000011217	-	97	59.259	Ciona_savignyi
ENSCSEG00000005628	xrn2	100	72.157	ENSCANG00000040240	XRN2	54	72.157	Colobus_angolensis_palliatus
ENSCSEG00000005628	xrn2	100	73.228	ENSCGRG00001010676	Xrn2	55	73.425	Cricetulus_griseus_chok1gshd
ENSCSEG00000005628	xrn2	95	72.199	ENSCGRG00000006378	Xrn2	52	72.407	Cricetulus_griseus_crigri
ENSCSEG00000005628	xrn2	100	81.190	ENSCVAG00000018999	xrn2	97	81.382	Cyprinodon_variegatus
ENSCSEG00000005628	xrn2	100	75.483	ENSDARG00000101900	xrn2	96	76.015	Danio_rerio
ENSCSEG00000005628	xrn2	100	72.549	ENSDNOG00000001895	XRN2	54	72.549	Dasypus_novemcinctus
ENSCSEG00000005628	xrn2	100	72.353	ENSDORG00000005434	Xrn2	55	72.353	Dipodomys_ordii
ENSCSEG00000005628	xrn2	93	58.511	FBgn0031868	Rat1	52	58.511	Drosophila_melanogaster
ENSCSEG00000005628	xrn2	100	66.919	ENSEBUG00000016136	xrn2	64	66.667	Eptatretus_burgeri
ENSCSEG00000005628	xrn2	100	72.353	ENSEASG00005002484	XRN2	54	72.353	Equus_asinus_asinus
ENSCSEG00000005628	xrn2	89	92.308	ENSECAG00000018988	XRN2	55	69.886	Equus_caballus
ENSCSEG00000005628	xrn2	100	81.151	ENSELUG00000000552	xrn2	52	81.151	Esox_lucius
ENSCSEG00000005628	xrn2	100	72.353	ENSFCAG00000007970	XRN2	56	72.353	Felis_catus
ENSCSEG00000005628	xrn2	100	73.777	ENSFALG00000004508	XRN2	54	73.777	Ficedula_albicollis
ENSCSEG00000005628	xrn2	100	72.549	ENSFDAG00000016311	XRN2	54	72.549	Fukomys_damarensis
ENSCSEG00000005628	xrn2	100	72.745	ENSFHEG00000013039	xrn2	98	72.937	Fundulus_heteroclitus
ENSCSEG00000005628	xrn2	100	76.938	ENSGMOG00000013436	xrn2	61	76.938	Gadus_morhua
ENSCSEG00000005628	xrn2	100	74.460	ENSGALG00000008372	XRN2	54	74.460	Gallus_gallus
ENSCSEG00000005628	xrn2	100	79.423	ENSGAFG00000014284	xrn2	92	78.832	Gambusia_affinis
ENSCSEG00000005628	xrn2	100	82.171	ENSGACG00000011870	xrn2	96	82.171	Gasterosteus_aculeatus
ENSCSEG00000005628	xrn2	100	73.828	ENSGAGG00000004884	XRN2	53	74.074	Gopherus_agassizii
ENSCSEG00000005628	xrn2	100	72.157	ENSGGOG00000013738	XRN2	54	72.157	Gorilla_gorilla
ENSCSEG00000005628	xrn2	99	76.938	ENSHBUG00000005077	xrn2	96	77.500	Haplochromis_burtoni
ENSCSEG00000005628	xrn2	100	70.588	ENSHGLG00000014831	XRN2	53	70.196	Heterocephalus_glaber_female
ENSCSEG00000005628	xrn2	100	70.588	ENSHGLG00100013130	XRN2	53	70.196	Heterocephalus_glaber_male
ENSCSEG00000005628	xrn2	100	79.730	ENSHCOG00000011994	xrn2	53	78.185	Hippocampus_comes
ENSCSEG00000005628	xrn2	100	78.503	ENSIPUG00000006639	xrn2	54	78.503	Ictalurus_punctatus
ENSCSEG00000005628	xrn2	100	72.353	ENSSTOG00000000589	XRN2	54	72.353	Ictidomys_tridecemlineatus
ENSCSEG00000005628	xrn2	100	72.941	ENSJJAG00000022128	Xrn2	54	72.941	Jaculus_jaculus
ENSCSEG00000005628	xrn2	100	81.621	ENSLBEG00000010041	xrn2	100	83.399	Labrus_bergylta
ENSCSEG00000005628	xrn2	97	71.800	ENSLACG00000008307	XRN2	61	70.200	Latimeria_chalumnae
ENSCSEG00000005628	xrn2	99	77.603	ENSLOCG00000016874	xrn2	54	77.603	Lepisosteus_oculatus
ENSCSEG00000005628	xrn2	100	72.549	ENSLAFG00000014624	XRN2	54	72.549	Loxodonta_africana
ENSCSEG00000005628	xrn2	100	72.157	ENSMFAG00000038122	XRN2	54	72.157	Macaca_fascicularis
ENSCSEG00000005628	xrn2	100	72.157	ENSMMUG00000011405	XRN2	54	72.157	Macaca_mulatta
ENSCSEG00000005628	xrn2	100	72.157	ENSMNEG00000040626	XRN2	54	72.157	Macaca_nemestrina
ENSCSEG00000005628	xrn2	100	71.961	ENSMLEG00000041897	XRN2	54	71.961	Mandrillus_leucophaeus
ENSCSEG00000005628	xrn2	100	83.202	ENSMAMG00000008633	xrn2	53	83.399	Mastacembelus_armatus
ENSCSEG00000005628	xrn2	100	79.730	ENSMZEG00005022362	xrn2	94	77.132	Maylandia_zebra
ENSCSEG00000005628	xrn2	100	73.684	ENSMGAG00000003196	XRN2	54	73.684	Meleagris_gallopavo
ENSCSEG00000005628	xrn2	100	72.638	ENSMAUG00000021842	Xrn2	54	72.638	Mesocricetus_auratus
ENSCSEG00000005628	xrn2	100	72.157	ENSMICG00000008126	XRN2	54	72.157	Microcebus_murinus
ENSCSEG00000005628	xrn2	100	71.765	ENSMOCG00000012588	Xrn2	54	71.961	Microtus_ochrogaster
ENSCSEG00000005628	xrn2	100	80.230	ENSMMOG00000017576	xrn2	95	76.392	Mola_mola
ENSCSEG00000005628	xrn2	100	73.725	ENSMODG00000006163	XRN2	54	73.725	Monodelphis_domestica
ENSCSEG00000005628	xrn2	100	78.887	ENSMALG00000011355	xrn2	95	79.079	Monopterus_albus
ENSCSEG00000005628	xrn2	100	72.745	MGP_CAROLIEiJ_G0024400	Xrn2	54	72.745	Mus_caroli
ENSCSEG00000005628	xrn2	100	72.745	ENSMUSG00000027433	Xrn2	54	72.745	Mus_musculus
ENSCSEG00000005628	xrn2	100	72.745	MGP_PahariEiJ_G0025843	Xrn2	54	72.745	Mus_pahari
ENSCSEG00000005628	xrn2	100	72.745	MGP_SPRETEiJ_G0025318	Xrn2	54	72.745	Mus_spretus
ENSCSEG00000005628	xrn2	100	72.299	ENSMLUG00000001536	XRN2	54	72.299	Myotis_lucifugus
ENSCSEG00000005628	xrn2	100	72.549	ENSNGAG00000018138	Xrn2	54	72.549	Nannospalax_galili
ENSCSEG00000005628	xrn2	100	80.271	ENSNBRG00000008062	xrn2	96	77.500	Neolamprologus_brichardi
ENSCSEG00000005628	xrn2	100	72.157	ENSNLEG00000009991	XRN2	54	72.157	Nomascus_leucogenys
ENSCSEG00000005628	xrn2	97	65.795	ENSODEG00000000860	-	54	66.197	Octodon_degus
ENSCSEG00000005628	xrn2	100	72.353	ENSODEG00000010745	-	54	72.353	Octodon_degus
ENSCSEG00000005628	xrn2	100	79.767	ENSONIG00000018720	xrn2	53	79.961	Oreochromis_niloticus
ENSCSEG00000005628	xrn2	100	72.941	ENSOANG00000015673	XRN2	54	72.941	Ornithorhynchus_anatinus
ENSCSEG00000005628	xrn2	100	72.549	ENSOCUG00000013468	XRN2	54	72.549	Oryctolagus_cuniculus
ENSCSEG00000005628	xrn2	100	79.271	ENSORLG00000017213	xrn2	58	79.271	Oryzias_latipes
ENSCSEG00000005628	xrn2	100	79.271	ENSORLG00020001824	xrn2	54	79.271	Oryzias_latipes_hni
ENSCSEG00000005628	xrn2	100	79.271	ENSORLG00015019747	xrn2	54	79.271	Oryzias_latipes_hsok
ENSCSEG00000005628	xrn2	100	79.079	ENSOMEG00000019820	xrn2	53	79.079	Oryzias_melastigma
ENSCSEG00000005628	xrn2	100	71.820	ENSOGAG00000001068	XRN2	54	71.820	Otolemur_garnettii
ENSCSEG00000005628	xrn2	95	70.455	ENSOARG00000004443	XRN2	52	70.455	Ovis_aries
ENSCSEG00000005628	xrn2	100	72.157	ENSPPAG00000033549	XRN2	54	72.157	Pan_paniscus
ENSCSEG00000005628	xrn2	100	72.353	ENSPPRG00000008732	XRN2	54	72.353	Panthera_pardus
ENSCSEG00000005628	xrn2	95	71.281	ENSPTIG00000015683	XRN2	51	71.281	Panthera_tigris_altaica
ENSCSEG00000005628	xrn2	100	72.157	ENSPTRG00000013308	XRN2	54	72.157	Pan_troglodytes
ENSCSEG00000005628	xrn2	100	72.157	ENSPANG00000018088	XRN2	54	72.157	Papio_anubis
ENSCSEG00000005628	xrn2	100	75.000	ENSPKIG00000016889	xrn2	54	75.192	Paramormyrops_kingsleyae
ENSCSEG00000005628	xrn2	89	72.926	ENSPSIG00000014666	XRN2	60	72.926	Pelodiscus_sinensis
ENSCSEG00000005628	xrn2	100	72.353	ENSPEMG00000000111	Xrn2	54	72.353	Peromyscus_maniculatus_bairdii
ENSCSEG00000005628	xrn2	65	64.897	ENSPMAG00000002576	xrn2	100	65.782	Petromyzon_marinus
ENSCSEG00000005628	xrn2	99	81.532	ENSPFOG00000004182	xrn2	53	81.729	Poecilia_formosa
ENSCSEG00000005628	xrn2	100	80.000	ENSPLAG00000007351	xrn2	58	80.192	Poecilia_latipinna
ENSCSEG00000005628	xrn2	89	77.897	ENSPMEG00000011798	xrn2	51	78.112	Poecilia_mexicana
ENSCSEG00000005628	xrn2	100	79.615	ENSPREG00000012452	xrn2	58	79.808	Poecilia_reticulata
ENSCSEG00000005628	xrn2	100	72.157	ENSPPYG00000010755	XRN2	54	72.157	Pongo_abelii
ENSCSEG00000005628	xrn2	100	72.353	ENSPCAG00000011191	XRN2	53	72.353	Procavia_capensis
ENSCSEG00000005628	xrn2	100	63.529	ENSPCOG00000016468	XRN2	52	63.529	Propithecus_coquereli
ENSCSEG00000005628	xrn2	100	59.608	ENSPVAG00000004596	XRN2	54	59.608	Pteropus_vampyrus
ENSCSEG00000005628	xrn2	100	76.834	ENSPNYG00000001765	xrn2	94	74.225	Pundamilia_nyererei
ENSCSEG00000005628	xrn2	100	76.583	ENSPNAG00000010956	xrn2	54	77.351	Pygocentrus_nattereri
ENSCSEG00000005628	xrn2	100	72.745	ENSRNOG00000011785	Xrn2	54	72.941	Rattus_norvegicus
ENSCSEG00000005628	xrn2	100	72.157	ENSRBIG00000036193	XRN2	62	72.157	Rhinopithecus_bieti
ENSCSEG00000005628	xrn2	100	72.157	ENSSBOG00000021014	XRN2	54	72.157	Saimiri_boliviensis_boliviensis
ENSCSEG00000005628	xrn2	100	77.092	ENSSFOG00015001091	xrn2	57	77.291	Scleropages_formosus
ENSCSEG00000005628	xrn2	100	81.081	ENSSMAG00000007834	xrn2	53	79.730	Scophthalmus_maximus
ENSCSEG00000005628	xrn2	99	80.998	ENSSDUG00000012802	xrn2	60	81.190	Seriola_dumerili
ENSCSEG00000005628	xrn2	100	84.190	ENSSLDG00000021273	xrn2	58	84.387	Seriola_lalandi_dorsalis
ENSCSEG00000005628	xrn2	100	74.414	ENSSPUG00000005485	XRN2	54	74.414	Sphenodon_punctatus
ENSCSEG00000005628	xrn2	100	80.271	ENSSPAG00000016027	xrn2	53	80.464	Stegastes_partitus
ENSCSEG00000005628	xrn2	100	72.157	ENSSSCG00000007109	XRN2	55	72.157	Sus_scrofa
ENSCSEG00000005628	xrn2	100	71.735	ENSTGUG00000007535	XRN2	54	71.735	Taeniopygia_guttata
ENSCSEG00000005628	xrn2	100	80.830	ENSTRUG00000015489	xrn2	52	82.016	Takifugu_rubripes
ENSCSEG00000005628	xrn2	100	81.299	ENSTNIG00000010712	xrn2	53	82.480	Tetraodon_nigroviridis
ENSCSEG00000005628	xrn2	100	71.961	ENSTBEG00000004119	XRN2	54	71.961	Tupaia_belangeri
ENSCSEG00000005628	xrn2	100	71.373	ENSTTRG00000009087	XRN2	54	71.373	Tursiops_truncatus
ENSCSEG00000005628	xrn2	100	72.441	ENSUAMG00000024634	XRN2	55	72.353	Ursus_americanus
ENSCSEG00000005628	xrn2	95	71.281	ENSUMAG00000004012	XRN2	50	71.281	Ursus_maritimus
ENSCSEG00000005628	xrn2	100	72.353	ENSVVUG00000012178	XRN2	54	72.353	Vulpes_vulpes
ENSCSEG00000005628	xrn2	100	74.704	ENSXETG00000023501	xrn2	54	74.901	Xenopus_tropicalis
ENSCSEG00000005628	xrn2	100	79.231	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus