EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005741 (Gene tree)
Gene ID: 103381324
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6325 bases
Position: chr7:13342081-13348405
Accession: 103381324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009007	RNase_H	PF00075.24	9e-43	1	1
ENSCSEP00000008984	RNase_H	PF00075.24	9.8e-43	1	1
ENSCSEP00000008997	RNase_H	PF00075.24	1.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009110	-	870	-	ENSCSEP00000009007	289 (aa)	-	-
ENSCSET00000009087	-	885	-	ENSCSEP00000008984	294 (aa)	-	-
ENSCSET00000009100	-	951	XM_008313616	ENSCSEP00000008997	316 (aa)	XP_008311838	-

Gene Model

Click here to download ENSCSEG00000005741's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005741	rnaseh1	93	52.239	ENSG00000171865	RNASEH1	90	53.053	Homo_sapiens
ENSCSEG00000005741	rnaseh1	97	68.932	ENSAPOG00000000412	rnaseh1	100	68.608	Acanthochromis_polyacanthus
ENSCSEG00000005741	rnaseh1	93	51.648	ENSAMEG00000018433	RNASEH1	96	51.246	Ailuropoda_melanoleuca
ENSCSEG00000005741	rnaseh1	98	66.238	ENSACIG00000014666	rnaseh1	100	66.238	Amphilophus_citrinellus
ENSCSEG00000005741	rnaseh1	97	68.608	ENSAOCG00000015210	rnaseh1	100	68.285	Amphiprion_ocellaris
ENSCSEG00000005741	rnaseh1	97	67.961	ENSAPEG00000014104	rnaseh1	100	67.638	Amphiprion_percula
ENSCSEG00000005741	rnaseh1	98	70.833	ENSATEG00000000598	rnaseh1	100	70.345	Anabas_testudineus
ENSCSEG00000005741	rnaseh1	89	47.940	ENSAPLG00000001961	RNASEH1	100	49.219	Anas_platyrhynchos
ENSCSEG00000005741	rnaseh1	93	46.465	ENSACAG00000016857	rnaseh1	99	44.136	Anolis_carolinensis
ENSCSEG00000005741	rnaseh1	93	51.866	ENSANAG00000024055	RNASEH1	98	49.324	Aotus_nancymaae
ENSCSEG00000005741	rnaseh1	97	68.254	ENSACLG00000006741	rnaseh1	99	67.619	Astatotilapia_calliptera
ENSCSEG00000005741	rnaseh1	94	54.839	ENSAMXG00000042940	rnaseh1	97	55.970	Astyanax_mexicanus
ENSCSEG00000005741	rnaseh1	93	52.239	ENSBTAG00000016235	RNASEH1	98	50.699	Bos_taurus
ENSCSEG00000005741	rnaseh1	94	35.897	WBGene00004382	rnh-1.0	97	37.402	Caenorhabditis_elegans
ENSCSEG00000005741	rnaseh1	93	51.103	ENSCJAG00000035450	RNASEH1	90	50.943	Callithrix_jacchus
ENSCSEG00000005741	rnaseh1	94	52.098	ENSCAFG00000003259	RNASEH1	99	51.557	Canis_familiaris
ENSCSEG00000005741	rnaseh1	52	63.087	ENSCAFG00020004994	RNASEH1	96	63.087	Canis_lupus_dingo
ENSCSEG00000005741	rnaseh1	85	41.036	ENSCHIG00000022230	-	99	40.945	Capra_hircus
ENSCSEG00000005741	rnaseh1	93	52.985	ENSCHIG00000022264	-	98	50.699	Capra_hircus
ENSCSEG00000005741	rnaseh1	94	50.554	ENSTSYG00000012926	RNASEH1	90	50.763	Carlito_syrichta
ENSCSEG00000005741	rnaseh1	87	52.362	ENSCAPG00000004813	RNASEH1	98	52.282	Cavia_aperea
ENSCSEG00000005741	rnaseh1	93	52.399	ENSCPOG00000022278	Rnaseh1	86	52.326	Cavia_porcellus
ENSCSEG00000005741	rnaseh1	93	51.838	ENSCCAG00000038017	RNASEH1	89	53.640	Cebus_capucinus
ENSCSEG00000005741	rnaseh1	93	51.866	ENSCATG00000016515	-	90	52.290	Cercocebus_atys
ENSCSEG00000005741	rnaseh1	93	46.619	ENSCATG00000016818	-	90	49.609	Cercocebus_atys
ENSCSEG00000005741	rnaseh1	93	51.493	ENSCLAG00000002440	RNASEH1	90	51.172	Chinchilla_lanigera
ENSCSEG00000005741	rnaseh1	93	52.612	ENSCSAG00000006943	RNASEH1	90	52.273	Chlorocebus_sabaeus
ENSCSEG00000005741	rnaseh1	64	57.838	ENSCHOG00000008547	RNASEH1	86	59.659	Choloepus_hoffmanni
ENSCSEG00000005741	rnaseh1	94	50.183	ENSCPBG00000021620	RNASEH1	99	51.301	Chrysemys_picta_bellii
ENSCSEG00000005741	rnaseh1	93	35.294	ENSCING00000014054	-	94	36.237	Ciona_intestinalis
ENSCSEG00000005741	rnaseh1	81	37.500	ENSCSAVG00000000009	-	99	40.175	Ciona_savignyi
ENSCSEG00000005741	rnaseh1	93	51.866	ENSCANG00000037763	RNASEH1	90	52.490	Colobus_angolensis_palliatus
ENSCSEG00000005741	rnaseh1	93	48.214	ENSCGRG00001008950	Rnaseh1	92	48.973	Cricetulus_griseus_chok1gshd
ENSCSEG00000005741	rnaseh1	93	48.214	ENSCGRG00000006029	Rnaseh1	92	48.973	Cricetulus_griseus_crigri
ENSCSEG00000005741	rnaseh1	95	69.314	ENSCVAG00000018717	rnaseh1	99	65.147	Cyprinodon_variegatus
ENSCSEG00000005741	rnaseh1	94	63.082	ENSDARG00000042571	rnaseh1	99	62.637	Danio_rerio
ENSCSEG00000005741	rnaseh1	93	52.747	ENSDNOG00000016056	RNASEH1	98	51.408	Dasypus_novemcinctus
ENSCSEG00000005741	rnaseh1	93	51.282	ENSDORG00000000704	Rnaseh1	90	53.101	Dipodomys_ordii
ENSCSEG00000005741	rnaseh1	93	38.188	FBgn0023171	rnh1	92	38.276	Drosophila_melanogaster
ENSCSEG00000005741	rnaseh1	93	47.601	ENSETEG00000012674	RNASEH1	90	48.462	Echinops_telfairi
ENSCSEG00000005741	rnaseh1	92	41.264	ENSEBUG00000006116	rnaseh1	77	44.223	Eptatretus_burgeri
ENSCSEG00000005741	rnaseh1	93	46.552	ENSEBUG00000008898	rnaseh1	98	45.675	Eptatretus_burgeri
ENSCSEG00000005741	rnaseh1	93	52.612	ENSEASG00005022200	RNASEH1	97	49.492	Equus_asinus_asinus
ENSCSEG00000005741	rnaseh1	93	52.612	ENSECAG00000020695	RNASEH1	97	49.492	Equus_caballus
ENSCSEG00000005741	rnaseh1	95	67.857	ENSELUG00000010112	rnaseh1	99	62.963	Esox_lucius
ENSCSEG00000005741	rnaseh1	93	52.963	ENSFCAG00000025832	RNASEH1	98	51.399	Felis_catus
ENSCSEG00000005741	rnaseh1	97	51.203	ENSFALG00000002069	RNASEH1	93	52.857	Ficedula_albicollis
ENSCSEG00000005741	rnaseh1	93	51.119	ENSFDAG00000002035	RNASEH1	79	51.538	Fukomys_damarensis
ENSCSEG00000005741	rnaseh1	94	64.469	ENSGMOG00000013818	rnaseh1	99	62.626	Gadus_morhua
ENSCSEG00000005741	rnaseh1	95	51.786	ENSGALG00000016389	RNASEH1	93	52.381	Gallus_gallus
ENSCSEG00000005741	rnaseh1	95	66.787	ENSGAFG00000001776	rnaseh1	99	63.333	Gambusia_affinis
ENSCSEG00000005741	rnaseh1	95	68.364	ENSGACG00000011935	rnaseh1	98	67.224	Gasterosteus_aculeatus
ENSCSEG00000005741	rnaseh1	94	50.735	ENSGAGG00000009150	RNASEH1	61	52.593	Gopherus_agassizii
ENSCSEG00000005741	rnaseh1	93	52.239	ENSGGOG00000034822	RNASEH1	90	53.435	Gorilla_gorilla
ENSCSEG00000005741	rnaseh1	97	68.881	ENSHBUG00000004666	rnaseh1	96	68.525	Haplochromis_burtoni
ENSCSEG00000005741	rnaseh1	93	51.481	ENSHGLG00000002585	Rnaseh1	83	50.575	Heterocephalus_glaber_female
ENSCSEG00000005741	rnaseh1	93	51.481	ENSHGLG00100005105	Rnaseh1	83	50.575	Heterocephalus_glaber_male
ENSCSEG00000005741	rnaseh1	96	67.870	ENSHCOG00000012329	rnaseh1	98	66.890	Hippocampus_comes
ENSCSEG00000005741	rnaseh1	95	59.011	ENSIPUG00000023060	rnaseh1	98	61.811	Ictalurus_punctatus
ENSCSEG00000005741	rnaseh1	93	51.301	ENSSTOG00000012774	RNASEH1	92	51.724	Ictidomys_tridecemlineatus
ENSCSEG00000005741	rnaseh1	91	42.045	ENSJJAG00000008994	-	88	43.952	Jaculus_jaculus
ENSCSEG00000005741	rnaseh1	85	48.178	ENSJJAG00000020238	Rnaseh1	90	51.082	Jaculus_jaculus
ENSCSEG00000005741	rnaseh1	94	46.182	ENSJJAG00000021481	-	94	46.570	Jaculus_jaculus
ENSCSEG00000005741	rnaseh1	98	65.603	ENSKMAG00000001373	rnaseh1	96	63.140	Kryptolebias_marmoratus
ENSCSEG00000005741	rnaseh1	96	70.251	ENSLBEG00000004480	rnaseh1	98	69.534	Labrus_bergylta
ENSCSEG00000005741	rnaseh1	95	51.246	ENSLACG00000007100	RNASEH1	90	51.071	Latimeria_chalumnae
ENSCSEG00000005741	rnaseh1	95	59.220	ENSLOCG00000017212	rnaseh1	99	59.220	Lepisosteus_oculatus
ENSCSEG00000005741	rnaseh1	93	52.222	ENSLAFG00000015091	RNASEH1	98	50.694	Loxodonta_africana
ENSCSEG00000005741	rnaseh1	93	51.866	ENSMFAG00000000063	-	89	53.101	Macaca_fascicularis
ENSCSEG00000005741	rnaseh1	93	47.122	ENSMFAG00000002323	-	89	50.000	Macaca_fascicularis
ENSCSEG00000005741	rnaseh1	93	47.482	ENSMMUG00000019280	-	89	49.421	Macaca_mulatta
ENSCSEG00000005741	rnaseh1	93	47.482	ENSMNEG00000029676	-	89	49.421	Macaca_nemestrina
ENSCSEG00000005741	rnaseh1	93	51.866	ENSMNEG00000040183	-	89	53.101	Macaca_nemestrina
ENSCSEG00000005741	rnaseh1	93	48.561	ENSMLEG00000028662	-	89	50.988	Mandrillus_leucophaeus
ENSCSEG00000005741	rnaseh1	87	51.394	ENSMLEG00000039352	-	99	52.245	Mandrillus_leucophaeus
ENSCSEG00000005741	rnaseh1	98	69.872	ENSMAMG00000019725	rnaseh1	99	69.310	Mastacembelus_armatus
ENSCSEG00000005741	rnaseh1	97	68.254	ENSMZEG00005013006	rnaseh1	99	67.619	Maylandia_zebra
ENSCSEG00000005741	rnaseh1	84	50.602	ENSMGAG00000013979	RNASEH1	99	51.440	Meleagris_gallopavo
ENSCSEG00000005741	rnaseh1	93	50.741	ENSMAUG00000014957	Rnaseh1	89	51.894	Mesocricetus_auratus
ENSCSEG00000005741	rnaseh1	93	52.747	ENSMICG00000033156	RNASEH1	88	53.906	Microcebus_murinus
ENSCSEG00000005741	rnaseh1	93	51.648	ENSMOCG00000015522	Rnaseh1	89	52.510	Microtus_ochrogaster
ENSCSEG00000005741	rnaseh1	96	69.928	ENSMMOG00000015902	rnaseh1	99	66.340	Mola_mola
ENSCSEG00000005741	rnaseh1	84	46.914	ENSMODG00000028814	-	93	46.281	Monodelphis_domestica
ENSCSEG00000005741	rnaseh1	93	51.852	ENSMODG00000014491	-	99	49.291	Monodelphis_domestica
ENSCSEG00000005741	rnaseh1	98	67.596	ENSMALG00000010565	rnaseh1	99	65.049	Monopterus_albus
ENSCSEG00000005741	rnaseh1	93	51.838	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	53.516	Mus_caroli
ENSCSEG00000005741	rnaseh1	93	52.206	ENSMUSG00000020630	Rnaseh1	89	53.906	Mus_musculus
ENSCSEG00000005741	rnaseh1	93	48.571	MGP_PahariEiJ_G0029418	Rnaseh1	92	51.282	Mus_pahari
ENSCSEG00000005741	rnaseh1	93	52.416	MGP_SPRETEiJ_G0018502	Rnaseh1	89	52.140	Mus_spretus
ENSCSEG00000005741	rnaseh1	66	55.497	ENSMPUG00000012984	RNASEH1	88	55.738	Mustela_putorius_furo
ENSCSEG00000005741	rnaseh1	93	52.015	ENSNGAG00000015966	Rnaseh1	85	51.908	Nannospalax_galili
ENSCSEG00000005741	rnaseh1	97	68.571	ENSNBRG00000008739	rnaseh1	99	67.937	Neolamprologus_brichardi
ENSCSEG00000005741	rnaseh1	86	42.913	ENSNLEG00000000059	-	88	47.619	Nomascus_leucogenys
ENSCSEG00000005741	rnaseh1	93	44.689	ENSNLEG00000015400	RNASEH1	89	44.697	Nomascus_leucogenys
ENSCSEG00000005741	rnaseh1	94	33.948	ENSMEUG00000003610	-	90	36.759	Notamacropus_eugenii
ENSCSEG00000005741	rnaseh1	93	50.746	ENSOPRG00000005072	RNASEH1	89	53.725	Ochotona_princeps
ENSCSEG00000005741	rnaseh1	96	52.518	ENSODEG00000000235	Rnaseh1	87	54.724	Octodon_degus
ENSCSEG00000005741	rnaseh1	95	70.213	ENSONIG00000018697	rnaseh1	99	69.258	Oreochromis_niloticus
ENSCSEG00000005741	rnaseh1	93	51.493	ENSOCUG00000006117	RNASEH1	89	53.435	Oryctolagus_cuniculus
ENSCSEG00000005741	rnaseh1	98	67.376	ENSORLG00000018127	rnaseh1	99	67.376	Oryzias_latipes
ENSCSEG00000005741	rnaseh1	98	67.376	ENSORLG00020013660	rnaseh1	97	66.779	Oryzias_latipes_hni
ENSCSEG00000005741	rnaseh1	98	67.730	ENSORLG00015011338	rnaseh1	97	67.114	Oryzias_latipes_hsok
ENSCSEG00000005741	rnaseh1	87	66.534	ENSOMEG00000004710	rnaseh1	99	63.736	Oryzias_melastigma
ENSCSEG00000005741	rnaseh1	93	51.095	ENSOGAG00000017176	RNASEH1	90	51.145	Otolemur_garnettii
ENSCSEG00000005741	rnaseh1	93	48.000	ENSOARG00000005386	RNASEH1	99	45.902	Ovis_aries
ENSCSEG00000005741	rnaseh1	93	52.239	ENSPPAG00000034221	RNASEH1	90	53.053	Pan_paniscus
ENSCSEG00000005741	rnaseh1	93	52.222	ENSPPRG00000015513	RNASEH1	98	50.699	Panthera_pardus
ENSCSEG00000005741	rnaseh1	87	52.381	ENSPTIG00000019034	RNASEH1	83	53.942	Panthera_tigris_altaica
ENSCSEG00000005741	rnaseh1	86	44.361	ENSPTRG00000043403	-	89	47.679	Pan_troglodytes
ENSCSEG00000005741	rnaseh1	93	52.239	ENSPTRG00000011614	RNASEH1	90	53.053	Pan_troglodytes
ENSCSEG00000005741	rnaseh1	93	46.403	ENSPANG00000018246	-	88	49.425	Papio_anubis
ENSCSEG00000005741	rnaseh1	93	52.239	ENSPANG00000000443	RNASEH1	98	52.439	Papio_anubis
ENSCSEG00000005741	rnaseh1	95	57.042	ENSPKIG00000003146	rnaseh1	99	59.023	Paramormyrops_kingsleyae
ENSCSEG00000005741	rnaseh1	94	49.462	ENSPSIG00000002937	RNASEH1	99	50.186	Pelodiscus_sinensis
ENSCSEG00000005741	rnaseh1	96	61.837	ENSPMGG00000017463	rnaseh1	99	61.232	Periophthalmus_magnuspinnatus
ENSCSEG00000005741	rnaseh1	93	50.000	ENSPEMG00000022465	-	89	51.562	Peromyscus_maniculatus_bairdii
ENSCSEG00000005741	rnaseh1	53	39.355	ENSPCIG00000026047	-	85	39.474	Phascolarctos_cinereus
ENSCSEG00000005741	rnaseh1	93	50.370	ENSPCIG00000023334	-	89	50.980	Phascolarctos_cinereus
ENSCSEG00000005741	rnaseh1	95	67.509	ENSPFOG00000002841	rnaseh1	100	63.725	Poecilia_formosa
ENSCSEG00000005741	rnaseh1	62	62.360	ENSPLAG00000021349	-	77	56.931	Poecilia_latipinna
ENSCSEG00000005741	rnaseh1	95	67.509	ENSPMEG00000016826	rnaseh1	100	63.725	Poecilia_mexicana
ENSCSEG00000005741	rnaseh1	95	67.845	ENSPREG00000012197	rnaseh1	100	64.103	Poecilia_reticulata
ENSCSEG00000005741	rnaseh1	93	43.657	ENSPPYG00000025873	RNASEH1	88	43.657	Pongo_abelii
ENSCSEG00000005741	rnaseh1	86	47.581	ENSPPYG00000008067	-	90	48.954	Pongo_abelii
ENSCSEG00000005741	rnaseh1	93	50.000	ENSPCAG00000002500	RNASEH1	98	47.797	Procavia_capensis
ENSCSEG00000005741	rnaseh1	94	47.619	ENSPCOG00000019444	RNASEH1	89	48.649	Propithecus_coquereli
ENSCSEG00000005741	rnaseh1	93	49.814	ENSPVAG00000002070	RNASEH1	99	47.020	Pteropus_vampyrus
ENSCSEG00000005741	rnaseh1	97	67.937	ENSPNYG00000001292	rnaseh1	99	67.302	Pundamilia_nyererei
ENSCSEG00000005741	rnaseh1	95	61.620	ENSPNAG00000022344	rnaseh1	99	61.131	Pygocentrus_nattereri
ENSCSEG00000005741	rnaseh1	93	49.254	ENSRNOG00000008584	Rnaseh1	89	52.734	Rattus_norvegicus
ENSCSEG00000005741	rnaseh1	93	51.493	ENSRBIG00000034222	RNASEH1	88	52.510	Rhinopithecus_bieti
ENSCSEG00000005741	rnaseh1	93	51.493	ENSRROG00000041761	RNASEH1	88	52.896	Rhinopithecus_roxellana
ENSCSEG00000005741	rnaseh1	96	50.000	YMR234W	-	87	50.000	Saccharomyces_cerevisiae
ENSCSEG00000005741	rnaseh1	93	49.135	ENSSBOG00000025411	RNASEH1	99	50.342	Saimiri_boliviensis_boliviensis
ENSCSEG00000005741	rnaseh1	93	51.852	ENSSHAG00000013051	RNASEH1	88	54.150	Sarcophilus_harrisii
ENSCSEG00000005741	rnaseh1	95	60.357	ENSSFOG00015002709	rnaseh1	99	59.857	Scleropages_formosus
ENSCSEG00000005741	rnaseh1	97	69.453	ENSSMAG00000007586	rnaseh1	99	68.810	Scophthalmus_maximus
ENSCSEG00000005741	rnaseh1	95	72.202	ENSSDUG00000008217	rnaseh1	99	69.204	Seriola_dumerili
ENSCSEG00000005741	rnaseh1	92	70.522	ENSSLDG00000000442	rnaseh1	95	70.656	Seriola_lalandi_dorsalis
ENSCSEG00000005741	rnaseh1	95	49.281	ENSSPUG00000006644	RNASEH1	94	49.281	Sphenodon_punctatus
ENSCSEG00000005741	rnaseh1	97	69.132	ENSSPAG00000009353	rnaseh1	99	68.489	Stegastes_partitus
ENSCSEG00000005741	rnaseh1	93	51.493	ENSSSCG00000025305	RNASEH1	98	50.877	Sus_scrofa
ENSCSEG00000005741	rnaseh1	95	50.890	ENSTGUG00000012980	RNASEH1	94	51.246	Taeniopygia_guttata
ENSCSEG00000005741	rnaseh1	95	66.547	ENSTRUG00000015774	rnaseh1	97	65.591	Takifugu_rubripes
ENSCSEG00000005741	rnaseh1	95	69.455	ENSTNIG00000010715	rnaseh1	99	68.459	Tetraodon_nigroviridis
ENSCSEG00000005741	rnaseh1	93	50.373	ENSTTRG00000001615	RNASEH1	99	47.315	Tursiops_truncatus
ENSCSEG00000005741	rnaseh1	52	61.745	ENSUAMG00000018254	RNASEH1	77	61.745	Ursus_americanus
ENSCSEG00000005741	rnaseh1	73	49.524	ENSUMAG00000003941	RNASEH1	65	51.741	Ursus_maritimus
ENSCSEG00000005741	rnaseh1	93	44.776	ENSVPAG00000011589	RNASEH1	89	45.914	Vicugna_pacos
ENSCSEG00000005741	rnaseh1	94	52.098	ENSVVUG00000008633	RNASEH1	89	51.557	Vulpes_vulpes
ENSCSEG00000005741	rnaseh1	85	42.972	ENSXETG00000030371	-	99	52.980	Xenopus_tropicalis
ENSCSEG00000005741	rnaseh1	95	51.515	ENSXETG00000001212	rnaseh1	99	54.305	Xenopus_tropicalis
ENSCSEG00000005741	rnaseh1	95	68.231	ENSXMAG00000002357	rnaseh1	99	65.000	Xiphophorus_maculatus