EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005748 (Gene tree)
Gene ID: 103386234
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4653 bases
Position: chr11:8560478-8565130
Accession: 103386234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000008971	R3H	PF01424.22	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009074	-	1282	XM_017036416	ENSCSEP00000008971	416 (aa)	XP_016891905	-

Gene Model

Click here to download ENSCSEG00000005748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005748	r3hcc1	98	32.783	ENSG00000104679	R3HCC1	95	33.255	Homo_sapiens
ENSCSEG00000005748	r3hcc1	99	57.869	ENSAPOG00000003616	r3hcc1	92	58.795	Acanthochromis_polyacanthus
ENSCSEG00000005748	r3hcc1	98	32.798	ENSAMEG00000002963	R3HCC1	87	33.716	Ailuropoda_melanoleuca
ENSCSEG00000005748	r3hcc1	99	52.349	ENSACIG00000017144	r3hcc1	98	53.829	Amphilophus_citrinellus
ENSCSEG00000005748	r3hcc1	98	59.559	ENSAOCG00000003945	r3hcc1	99	60.732	Amphiprion_ocellaris
ENSCSEG00000005748	r3hcc1	98	59.069	ENSAPEG00000003613	r3hcc1	99	60.488	Amphiprion_percula
ENSCSEG00000005748	r3hcc1	93	65.394	ENSATEG00000023860	r3hcc1	98	66.667	Anabas_testudineus
ENSCSEG00000005748	r3hcc1	98	37.931	ENSACAG00000016627	R3HCC1	94	37.355	Anolis_carolinensis
ENSCSEG00000005748	r3hcc1	98	31.868	ENSANAG00000036169	R3HCC1	91	33.021	Aotus_nancymaae
ENSCSEG00000005748	r3hcc1	99	32.974	ENSBTAG00000025830	R3HCC1	92	32.609	Bos_taurus
ENSCSEG00000005748	r3hcc1	98	32.527	ENSCJAG00000020118	R3HCC1	81	32.949	Callithrix_jacchus
ENSCSEG00000005748	r3hcc1	76	47.059	ENSCAFG00000009210	R3HCC1	91	33.864	Canis_familiaris
ENSCSEG00000005748	r3hcc1	63	42.308	ENSCAFG00020012870	R3HCC1	87	31.043	Canis_lupus_dingo
ENSCSEG00000005748	r3hcc1	99	31.072	ENSCHIG00000009107	R3HCC1	95	32.522	Capra_hircus
ENSCSEG00000005748	r3hcc1	98	34.023	ENSTSYG00000000511	R3HCC1	74	33.559	Carlito_syrichta
ENSCSEG00000005748	r3hcc1	98	32.035	ENSCPOG00000009696	R3HCC1	97	32.035	Cavia_porcellus
ENSCSEG00000005748	r3hcc1	98	31.868	ENSCCAG00000037811	R3HCC1	88	32.870	Cebus_capucinus
ENSCSEG00000005748	r3hcc1	98	31.878	ENSCATG00000032971	R3HCC1	95	32.639	Cercocebus_atys
ENSCSEG00000005748	r3hcc1	99	34.318	ENSCLAG00000015556	R3HCC1	81	34.722	Chinchilla_lanigera
ENSCSEG00000005748	r3hcc1	98	31.878	ENSCSAG00000016250	R3HCC1	87	32.877	Chlorocebus_sabaeus
ENSCSEG00000005748	r3hcc1	99	32.093	ENSCHOG00000000396	R3HCC1	92	33.258	Choloepus_hoffmanni
ENSCSEG00000005748	r3hcc1	98	32.629	ENSCANG00000029441	R3HCC1	95	32.697	Colobus_angolensis_palliatus
ENSCSEG00000005748	r3hcc1	77	47.333	ENSCGRG00001014977	R3hcc1	96	32.258	Cricetulus_griseus_chok1gshd
ENSCSEG00000005748	r3hcc1	77	47.333	ENSCGRG00000004454	R3hcc1	96	32.258	Cricetulus_griseus_crigri
ENSCSEG00000005748	r3hcc1	83	48.889	ENSCVAG00000002640	r3hcc1	93	48.889	Cyprinodon_variegatus
ENSCSEG00000005748	r3hcc1	98	43.842	ENSDARG00000099593	r3hcc1	96	43.842	Danio_rerio
ENSCSEG00000005748	r3hcc1	98	32.102	ENSDNOG00000007168	R3HCC1	88	32.564	Dasypus_novemcinctus
ENSCSEG00000005748	r3hcc1	78	46.203	ENSDORG00000026365	R3hcc1	97	32.903	Dipodomys_ordii
ENSCSEG00000005748	r3hcc1	99	30.233	ENSETEG00000001147	R3HCC1	93	30.303	Echinops_telfairi
ENSCSEG00000005748	r3hcc1	99	32.258	ENSEASG00005018782	R3HCC1	77	33.100	Equus_asinus_asinus
ENSCSEG00000005748	r3hcc1	99	32.192	ENSECAG00000025013	R3HCC1	94	33.179	Equus_caballus
ENSCSEG00000005748	r3hcc1	98	32.634	ENSEEUG00000011918	R3HCC1	92	33.485	Erinaceus_europaeus
ENSCSEG00000005748	r3hcc1	94	47.922	ENSELUG00000023650	r3hcc1	98	47.922	Esox_lucius
ENSCSEG00000005748	r3hcc1	98	32.227	ENSFCAG00000012395	R3HCC1	92	33.718	Felis_catus
ENSCSEG00000005748	r3hcc1	69	38.065	ENSFALG00000001646	R3HCC1	59	38.065	Ficedula_albicollis
ENSCSEG00000005748	r3hcc1	98	33.186	ENSFDAG00000001572	R3HCC1	96	33.186	Fukomys_damarensis
ENSCSEG00000005748	r3hcc1	95	38.287	ENSGMOG00000017590	-	95	38.287	Gadus_morhua
ENSCSEG00000005748	r3hcc1	99	56.459	ENSGAFG00000008747	-	93	56.923	Gambusia_affinis
ENSCSEG00000005748	r3hcc1	97	57.869	ENSGACG00000008447	r3hcc1	93	57.869	Gasterosteus_aculeatus
ENSCSEG00000005748	r3hcc1	98	32.235	ENSGGOG00000013817	R3HCC1	95	32.775	Gorilla_gorilla
ENSCSEG00000005748	r3hcc1	80	58.559	ENSHBUG00000022250	-	98	57.308	Haplochromis_burtoni
ENSCSEG00000005748	r3hcc1	98	33.099	ENSHGLG00000010517	R3HCC1	88	33.333	Heterocephalus_glaber_female
ENSCSEG00000005748	r3hcc1	98	33.099	ENSHGLG00100006388	R3HCC1	88	33.333	Heterocephalus_glaber_male
ENSCSEG00000005748	r3hcc1	97	52.099	ENSHCOG00000011745	r3hcc1	91	53.171	Hippocampus_comes
ENSCSEG00000005748	r3hcc1	97	46.305	ENSIPUG00000024504	r3hcc1	84	47.407	Ictalurus_punctatus
ENSCSEG00000005748	r3hcc1	86	46.341	ENSSTOG00000027130	R3HCC1	76	46.914	Ictidomys_tridecemlineatus
ENSCSEG00000005748	r3hcc1	56	50.000	ENSJJAG00000013075	R3hcc1	64	48.408	Jaculus_jaculus
ENSCSEG00000005748	r3hcc1	96	58.706	ENSKMAG00000000286	r3hcc1	100	58.706	Kryptolebias_marmoratus
ENSCSEG00000005748	r3hcc1	99	36.136	ENSLACG00000011894	R3HCC1	97	36.136	Latimeria_chalumnae
ENSCSEG00000005748	r3hcc1	98	45.972	ENSLOCG00000015442	r3hcc1	99	44.472	Lepisosteus_oculatus
ENSCSEG00000005748	r3hcc1	78	44.586	ENSLAFG00000016137	R3HCC1	92	31.027	Loxodonta_africana
ENSCSEG00000005748	r3hcc1	98	31.659	ENSMFAG00000032894	R3HCC1	95	32.464	Macaca_fascicularis
ENSCSEG00000005748	r3hcc1	98	32.143	ENSMMUG00000016655	R3HCC1	95	32.644	Macaca_mulatta
ENSCSEG00000005748	r3hcc1	98	32.444	ENSMNEG00000043283	R3HCC1	95	32.874	Macaca_nemestrina
ENSCSEG00000005748	r3hcc1	98	32.096	ENSMLEG00000030147	R3HCC1	95	31.667	Mandrillus_leucophaeus
ENSCSEG00000005748	r3hcc1	96	63.366	ENSMAMG00000018146	r3hcc1	100	64.179	Mastacembelus_armatus
ENSCSEG00000005748	r3hcc1	98	34.703	ENSMGAG00000001356	R3HCC1	88	34.703	Meleagris_gallopavo
ENSCSEG00000005748	r3hcc1	72	50.000	ENSMAUG00000016096	R3hcc1	68	46.980	Mesocricetus_auratus
ENSCSEG00000005748	r3hcc1	98	32.379	ENSMICG00000011146	R3HCC1	90	33.781	Microcebus_murinus
ENSCSEG00000005748	r3hcc1	68	47.619	ENSMOCG00000018508	R3hcc1	62	46.250	Microtus_ochrogaster
ENSCSEG00000005748	r3hcc1	99	30.769	ENSMODG00000016809	-	98	30.612	Monodelphis_domestica
ENSCSEG00000005748	r3hcc1	96	61.330	ENSMALG00000000731	r3hcc1	100	61.916	Monopterus_albus
ENSCSEG00000005748	r3hcc1	76	47.619	MGP_CAROLIEiJ_G0019467	R3hcc1	67	47.333	Mus_caroli
ENSCSEG00000005748	r3hcc1	77	46.711	ENSMUSG00000034194	R3hcc1	81	39.130	Mus_musculus
ENSCSEG00000005748	r3hcc1	76	47.333	MGP_PahariEiJ_G0030484	R3hcc1	66	47.333	Mus_pahari
ENSCSEG00000005748	r3hcc1	77	46.711	MGP_SPRETEiJ_G0020359	R3hcc1	96	31.092	Mus_spretus
ENSCSEG00000005748	r3hcc1	72	44.444	ENSMPUG00000003457	R3HCC1	60	43.678	Mustela_putorius_furo
ENSCSEG00000005748	r3hcc1	98	32.735	ENSMLUG00000000266	R3HCC1	88	35.104	Myotis_lucifugus
ENSCSEG00000005748	r3hcc1	89	88.889	ENSNBRG00000016975	-	81	88.889	Neolamprologus_brichardi
ENSCSEG00000005748	r3hcc1	91	30.227	ENSNLEG00000015944	R3HCC1	84	30.479	Nomascus_leucogenys
ENSCSEG00000005748	r3hcc1	99	36.066	ENSMEUG00000010587	R3HCC1	96	35.446	Notamacropus_eugenii
ENSCSEG00000005748	r3hcc1	99	34.266	ENSOPRG00000013390	R3HCC1	91	34.192	Ochotona_princeps
ENSCSEG00000005748	r3hcc1	99	31.866	ENSODEG00000007529	R3HCC1	97	33.117	Octodon_degus
ENSCSEG00000005748	r3hcc1	69	46.939	ENSOANG00000013877	R3HCC1	93	33.875	Ornithorhynchus_anatinus
ENSCSEG00000005748	r3hcc1	99	33.494	ENSOCUG00000023554	R3HCC1	82	33.176	Oryctolagus_cuniculus
ENSCSEG00000005748	r3hcc1	96	50.000	ENSORLG00000016816	r3hcc1	100	49.750	Oryzias_latipes
ENSCSEG00000005748	r3hcc1	96	49.250	ENSORLG00020012005	r3hcc1	100	49.500	Oryzias_latipes_hni
ENSCSEG00000005748	r3hcc1	96	49.750	ENSORLG00015007018	r3hcc1	100	49.500	Oryzias_latipes_hsok
ENSCSEG00000005748	r3hcc1	96	49.380	ENSOMEG00000000816	r3hcc1	100	49.380	Oryzias_melastigma
ENSCSEG00000005748	r3hcc1	98	33.408	ENSOGAG00000001291	R3HCC1	88	33.703	Otolemur_garnettii
ENSCSEG00000005748	r3hcc1	99	32.174	ENSOARG00000010146	R3HCC1	93	31.798	Ovis_aries
ENSCSEG00000005748	r3hcc1	98	32.235	ENSPPAG00000033165	R3HCC1	95	32.235	Pan_paniscus
ENSCSEG00000005748	r3hcc1	71	46.667	ENSPPRG00000002522	R3HCC1	96	32.294	Panthera_pardus
ENSCSEG00000005748	r3hcc1	63	46.000	ENSPTIG00000011230	R3HCC1	92	33.417	Panthera_tigris_altaica
ENSCSEG00000005748	r3hcc1	98	32.235	ENSPTRG00000020076	R3HCC1	88	32.235	Pan_troglodytes
ENSCSEG00000005748	r3hcc1	98	31.878	ENSPANG00000000453	R3HCC1	95	32.619	Papio_anubis
ENSCSEG00000005748	r3hcc1	91	46.597	ENSPKIG00000014426	-	94	46.597	Paramormyrops_kingsleyae
ENSCSEG00000005748	r3hcc1	91	47.165	ENSPKIG00000020397	-	95	47.165	Paramormyrops_kingsleyae
ENSCSEG00000005748	r3hcc1	98	35.831	ENSPSIG00000017664	R3HCC1	95	36.300	Pelodiscus_sinensis
ENSCSEG00000005748	r3hcc1	53	57.333	ENSPMGG00000007792	r3hcc1	98	36.199	Periophthalmus_magnuspinnatus
ENSCSEG00000005748	r3hcc1	76	47.651	ENSPEMG00000007118	R3hcc1	96	32.174	Peromyscus_maniculatus_bairdii
ENSCSEG00000005748	r3hcc1	91	32.836	ENSPCIG00000022718	-	82	32.587	Phascolarctos_cinereus
ENSCSEG00000005748	r3hcc1	99	56.132	ENSPFOG00000022301	r3hcc1	90	56.132	Poecilia_formosa
ENSCSEG00000005748	r3hcc1	99	56.132	ENSPLAG00000010794	r3hcc1	90	56.161	Poecilia_latipinna
ENSCSEG00000005748	r3hcc1	99	56.132	ENSPMEG00000022515	r3hcc1	90	56.132	Poecilia_mexicana
ENSCSEG00000005748	r3hcc1	99	57.656	ENSPREG00000000713	r3hcc1	90	57.656	Poecilia_reticulata
ENSCSEG00000005748	r3hcc1	90	32.412	ENSPPYG00000018436	R3HCC1	96	33.079	Pongo_abelii
ENSCSEG00000005748	r3hcc1	72	50.000	ENSPCAG00000012229	R3HCC1	63	50.000	Procavia_capensis
ENSCSEG00000005748	r3hcc1	98	32.743	ENSPCOG00000027554	R3HCC1	95	33.630	Propithecus_coquereli
ENSCSEG00000005748	r3hcc1	99	32.018	ENSPVAG00000009829	R3HCC1	93	32.018	Pteropus_vampyrus
ENSCSEG00000005748	r3hcc1	95	46.384	ENSPNAG00000023875	r3hcc1	98	47.368	Pygocentrus_nattereri
ENSCSEG00000005748	r3hcc1	82	46.875	ENSRNOG00000016777	AABR07018321.1	78	32.403	Rattus_norvegicus
ENSCSEG00000005748	r3hcc1	98	32.629	ENSRBIG00000028045	R3HCC1	95	32.697	Rhinopithecus_bieti
ENSCSEG00000005748	r3hcc1	98	32.629	ENSRROG00000031126	R3HCC1	95	32.697	Rhinopithecus_roxellana
ENSCSEG00000005748	r3hcc1	98	32.028	ENSSBOG00000022590	R3HCC1	95	32.471	Saimiri_boliviensis_boliviensis
ENSCSEG00000005748	r3hcc1	98	32.019	ENSSHAG00000016526	-	95	33.042	Sarcophilus_harrisii
ENSCSEG00000005748	r3hcc1	95	47.859	ENSSFOG00015013507	r3hcc1	100	47.859	Scleropages_formosus
ENSCSEG00000005748	r3hcc1	96	65.602	ENSSMAG00000008647	r3hcc1	100	65.602	Scophthalmus_maximus
ENSCSEG00000005748	r3hcc1	99	66.983	ENSSDUG00000022786	r3hcc1	97	67.221	Seriola_dumerili
ENSCSEG00000005748	r3hcc1	99	66.983	ENSSLDG00000019031	r3hcc1	97	67.221	Seriola_lalandi_dorsalis
ENSCSEG00000005748	r3hcc1	98	60.488	ENSSPAG00000013497	r3hcc1	99	60.488	Stegastes_partitus
ENSCSEG00000005748	r3hcc1	74	45.070	ENSSSCG00000037347	-	87	30.162	Sus_scrofa
ENSCSEG00000005748	r3hcc1	99	32.414	ENSSSCG00000039915	-	89	33.747	Sus_scrofa
ENSCSEG00000005748	r3hcc1	99	48.309	ENSTRUG00000015880	r3hcc1	98	48.309	Takifugu_rubripes
ENSCSEG00000005748	r3hcc1	99	31.788	ENSTTRG00000012247	R3HCC1	92	32.941	Tursiops_truncatus
ENSCSEG00000005748	r3hcc1	76	47.333	ENSUAMG00000007344	R3HCC1	95	33.259	Ursus_americanus
ENSCSEG00000005748	r3hcc1	76	46.711	ENSVVUG00000005056	R3HCC1	91	34.318	Vulpes_vulpes
ENSCSEG00000005748	r3hcc1	97	52.068	ENSXCOG00000017626	r3hcc1	90	52.427	Xiphophorus_couchianus
ENSCSEG00000005748	r3hcc1	99	56.595	ENSXMAG00000018375	r3hcc1	93	57.436	Xiphophorus_maculatus