EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005808 (Gene tree)
Gene ID: 103390827
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2155 bases
Position: chr15:8862229-8864383
Accession: 103390827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009087	RNase_H2_suC	PF08615.11	2.6e-17	1	1
ENSCSEP00000009091	RNase_H2_suC	PF08615.11	3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009198	-	417	XM_008326862	ENSCSEP00000009091	138 (aa)	XP_008325084	-
ENSCSET00000009193	-	402	-	ENSCSEP00000009087	133 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005808's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005808	rnaseh2c	99	83.212	ENSAPOG00000012901	rnaseh2c	100	83.212	Acanthochromis_polyacanthus
ENSCSEG00000005808	rnaseh2c	99	80.882	ENSACIG00000022433	rnaseh2c	100	80.882	Amphilophus_citrinellus
ENSCSEG00000005808	rnaseh2c	99	85.294	ENSAOCG00000016855	rnaseh2c	100	85.294	Amphiprion_ocellaris
ENSCSEG00000005808	rnaseh2c	99	86.029	ENSAPEG00000009850	rnaseh2c	100	86.029	Amphiprion_percula
ENSCSEG00000005808	rnaseh2c	99	86.765	ENSATEG00000014395	rnaseh2c	100	86.765	Anabas_testudineus
ENSCSEG00000005808	rnaseh2c	99	80.147	ENSACLG00000016950	rnaseh2c	100	80.147	Astatotilapia_calliptera
ENSCSEG00000005808	rnaseh2c	98	64.444	ENSAMXG00000001210	rnaseh2c	100	64.444	Astyanax_mexicanus
ENSCSEG00000005808	rnaseh2c	97	52.985	ENSCPBG00000023408	-	96	52.985	Chrysemys_picta_bellii
ENSCSEG00000005808	rnaseh2c	99	79.412	ENSCVAG00000006337	rnaseh2c	100	79.412	Cyprinodon_variegatus
ENSCSEG00000005808	rnaseh2c	99	64.964	ENSDARG00000089637	rnaseh2c	100	64.964	Danio_rerio
ENSCSEG00000005808	rnaseh2c	80	50.000	ENSEBUG00000014939	rnaseh2c	69	50.000	Eptatretus_burgeri
ENSCSEG00000005808	rnaseh2c	99	72.263	ENSELUG00000007345	rnaseh2c	100	72.263	Esox_lucius
ENSCSEG00000005808	rnaseh2c	94	78.462	ENSFHEG00000002419	rnaseh2c	95	77.692	Fundulus_heteroclitus
ENSCSEG00000005808	rnaseh2c	64	69.663	ENSGMOG00000008727	rnaseh2c	99	69.663	Gadus_morhua
ENSCSEG00000005808	rnaseh2c	99	77.941	ENSGAFG00000016755	rnaseh2c	83	77.941	Gambusia_affinis
ENSCSEG00000005808	rnaseh2c	97	52.985	ENSGAGG00000008193	-	96	52.985	Gopherus_agassizii
ENSCSEG00000005808	rnaseh2c	99	81.618	ENSHBUG00000012806	rnaseh2c	100	81.618	Haplochromis_burtoni
ENSCSEG00000005808	rnaseh2c	99	76.471	ENSHCOG00000007177	rnaseh2c	100	76.471	Hippocampus_comes
ENSCSEG00000005808	rnaseh2c	99	65.441	ENSIPUG00000018044	rnaseh2c	100	65.441	Ictalurus_punctatus
ENSCSEG00000005808	rnaseh2c	99	77.206	ENSKMAG00000004184	rnaseh2c	100	77.206	Kryptolebias_marmoratus
ENSCSEG00000005808	rnaseh2c	99	78.102	ENSLBEG00000005742	rnaseh2c	100	78.102	Labrus_bergylta
ENSCSEG00000005808	rnaseh2c	93	55.039	ENSLACG00000010120	-	93	55.303	Latimeria_chalumnae
ENSCSEG00000005808	rnaseh2c	99	81.618	ENSMAMG00000021610	rnaseh2c	100	81.618	Mastacembelus_armatus
ENSCSEG00000005808	rnaseh2c	99	80.882	ENSMZEG00005004796	rnaseh2c	100	80.882	Maylandia_zebra
ENSCSEG00000005808	rnaseh2c	99	83.824	ENSMMOG00000002869	rnaseh2c	100	83.824	Mola_mola
ENSCSEG00000005808	rnaseh2c	99	82.482	ENSMALG00000012198	rnaseh2c	100	82.482	Monopterus_albus
ENSCSEG00000005808	rnaseh2c	99	81.618	ENSNBRG00000001462	rnaseh2c	100	81.618	Neolamprologus_brichardi
ENSCSEG00000005808	rnaseh2c	99	80.882	ENSONIG00000005338	rnaseh2c	99	80.882	Oreochromis_niloticus
ENSCSEG00000005808	rnaseh2c	99	74.265	ENSORLG00000023473	rnaseh2c	100	74.265	Oryzias_latipes
ENSCSEG00000005808	rnaseh2c	99	74.265	ENSORLG00020019053	rnaseh2c	91	74.265	Oryzias_latipes_hni
ENSCSEG00000005808	rnaseh2c	99	75.000	ENSORLG00015017067	rnaseh2c	91	75.000	Oryzias_latipes_hsok
ENSCSEG00000005808	rnaseh2c	99	73.529	ENSOMEG00000018607	rnaseh2c	100	73.529	Oryzias_melastigma
ENSCSEG00000005808	rnaseh2c	99	60.294	ENSPKIG00000019331	rnaseh2c	100	60.294	Paramormyrops_kingsleyae
ENSCSEG00000005808	rnaseh2c	99	74.265	ENSPFOG00000009415	rnaseh2c	100	74.265	Poecilia_formosa
ENSCSEG00000005808	rnaseh2c	99	75.000	ENSPLAG00000023330	rnaseh2c	100	75.000	Poecilia_latipinna
ENSCSEG00000005808	rnaseh2c	99	75.000	ENSPMEG00000003696	rnaseh2c	100	75.000	Poecilia_mexicana
ENSCSEG00000005808	rnaseh2c	99	70.068	ENSPREG00000015384	rnaseh2c	73	70.068	Poecilia_reticulata
ENSCSEG00000005808	rnaseh2c	99	81.618	ENSPNYG00000014766	rnaseh2c	100	81.618	Pundamilia_nyererei
ENSCSEG00000005808	rnaseh2c	98	62.222	ENSPNAG00000019111	rnaseh2c	99	62.222	Pygocentrus_nattereri
ENSCSEG00000005808	rnaseh2c	98	67.407	ENSSFOG00015005760	rnaseh2c	99	67.407	Scleropages_formosus
ENSCSEG00000005808	rnaseh2c	99	84.559	ENSSMAG00000017738	rnaseh2c	100	84.559	Scophthalmus_maximus
ENSCSEG00000005808	rnaseh2c	99	83.824	ENSSDUG00000017285	rnaseh2c	100	83.824	Seriola_dumerili
ENSCSEG00000005808	rnaseh2c	99	85.294	ENSSLDG00000016030	rnaseh2c	100	85.294	Seriola_lalandi_dorsalis
ENSCSEG00000005808	rnaseh2c	94	50.376	ENSSPUG00000000842	-	89	49.265	Sphenodon_punctatus
ENSCSEG00000005808	rnaseh2c	99	80.882	ENSSPAG00000007536	rnaseh2c	100	80.882	Stegastes_partitus
ENSCSEG00000005808	rnaseh2c	99	72.794	ENSTRUG00000021845	rnaseh2c	100	72.794	Takifugu_rubripes
ENSCSEG00000005808	rnaseh2c	99	76.471	ENSTNIG00000000431	rnaseh2c	100	76.471	Tetraodon_nigroviridis
ENSCSEG00000005808	rnaseh2c	99	49.635	ENSXETG00000032466	-	100	49.635	Xenopus_tropicalis
ENSCSEG00000005808	rnaseh2c	99	76.471	ENSXCOG00000001611	rnaseh2c	100	76.471	Xiphophorus_couchianus
ENSCSEG00000005808	rnaseh2c	99	78.676	ENSXMAG00000003147	rnaseh2c	83	78.676	Xiphophorus_maculatus