EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005810 (Gene tree)
Gene ID: 103377870
Gene Symbol: tyw1
Alias: im:6898509|wu:fb74d01|zgc:153368
Full Name: tRNA-yW synthesizing protein 1 homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 24486 bases
Position: chr4:7192037-7216522
Accession: 103377870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009085	Wyosine_form	PF08608.12	2.1e-27	1	1
ENSCSEP00000009070	Wyosine_form	PF08608.12	2.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009192	-	2232	-	ENSCSEP00000009085	743 (aa)	-	-
ENSCSET00000009177	-	3783	XM_008308838	ENSCSEP00000009070	756 (aa)	XP_008307060	UPI000495948B
ENSCSET00000009182	-	2770	-	ENSCSEP00000009075	691 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005810	tyw1	94	66.574	ENSG00000198874	TYW1	98	67.684	Homo_sapiens
ENSCSEG00000005810	tyw1	84	64.174	ENSG00000277149	TYW1B	93	65.265	Homo_sapiens
ENSCSEG00000005810	tyw1	98	79.893	ENSAPOG00000014391	tyw1	99	80.481	Acanthochromis_polyacanthus
ENSCSEG00000005810	tyw1	94	78.641	ENSACIG00000007325	tyw1	99	77.080	Amphilophus_citrinellus
ENSCSEG00000005810	tyw1	98	79.706	ENSAOCG00000016792	tyw1	99	81.041	Amphiprion_ocellaris
ENSCSEG00000005810	tyw1	98	79.840	ENSAPEG00000015939	tyw1	99	83.964	Amphiprion_percula
ENSCSEG00000005810	tyw1	88	81.278	ENSATEG00000006856	tyw1	93	80.148	Anabas_testudineus
ENSCSEG00000005810	tyw1	94	66.111	ENSANAG00000037051	-	98	66.389	Aotus_nancymaae
ENSCSEG00000005810	tyw1	98	80.965	ENSACLG00000018688	tyw1	99	80.027	Astatotilapia_calliptera
ENSCSEG00000005810	tyw1	95	74.896	ENSAMXG00000004157	tyw1	99	75.451	Astyanax_mexicanus
ENSCSEG00000005810	tyw1	94	67.222	ENSBTAG00000008446	TYW1	98	66.667	Bos_taurus
ENSCSEG00000005810	tyw1	94	66.205	ENSCJAG00000004295	-	98	66.205	Callithrix_jacchus
ENSCSEG00000005810	tyw1	94	67.268	ENSCAFG00000010867	-	98	67.639	Canis_familiaris
ENSCSEG00000005810	tyw1	91	62.500	ENSCAFG00020005367	-	99	63.022	Canis_lupus_dingo
ENSCSEG00000005810	tyw1	94	68.056	ENSCHIG00000019510	-	98	67.361	Capra_hircus
ENSCSEG00000005810	tyw1	84	66.821	ENSTSYG00000008236	-	98	66.667	Carlito_syrichta
ENSCSEG00000005810	tyw1	83	63.495	ENSCAPG00000013569	-	100	64.163	Cavia_aperea
ENSCSEG00000005810	tyw1	93	65.793	ENSCPOG00000011182	-	98	64.738	Cavia_porcellus
ENSCSEG00000005810	tyw1	94	66.852	ENSCCAG00000026643	-	98	66.667	Cebus_capucinus
ENSCSEG00000005810	tyw1	94	66.297	ENSCATG00000043677	-	98	67.406	Cercocebus_atys
ENSCSEG00000005810	tyw1	94	65.470	ENSCLAG00000006321	-	98	65.470	Chinchilla_lanigera
ENSCSEG00000005810	tyw1	85	70.037	ENSCSAG00000018274	-	98	71.507	Chlorocebus_sabaeus
ENSCSEG00000005810	tyw1	98	66.667	ENSCPBG00000014896	-	99	72.744	Chrysemys_picta_bellii
ENSCSEG00000005810	tyw1	77	59.114	ENSCING00000004125	-	97	59.694	Ciona_intestinalis
ENSCSEG00000005810	tyw1	72	70.557	ENSCSAVG00000005712	-	100	56.636	Ciona_savignyi
ENSCSEG00000005810	tyw1	94	66.297	ENSCANG00000033209	-	98	67.406	Colobus_angolensis_palliatus
ENSCSEG00000005810	tyw1	66	77.778	ENSCGRG00001003679	Tyw1	85	77.778	Cricetulus_griseus_chok1gshd
ENSCSEG00000005810	tyw1	89	75.977	ENSCVAG00000001054	tyw1	96	75.731	Cyprinodon_variegatus
ENSCSEG00000005810	tyw1	94	76.422	ENSDARG00000062987	tyw1	95	75.417	Danio_rerio
ENSCSEG00000005810	tyw1	99	64.389	ENSDNOG00000024165	-	98	67.733	Dasypus_novemcinctus
ENSCSEG00000005810	tyw1	82	64.744	ENSDORG00000014772	Tyw1	91	64.263	Dipodomys_ordii
ENSCSEG00000005810	tyw1	58	74.074	ENSEBUG00000004494	tyw1	92	74.074	Eptatretus_burgeri
ENSCSEG00000005810	tyw1	94	67.406	ENSEASG00005008818	-	98	67.358	Equus_asinus_asinus
ENSCSEG00000005810	tyw1	95	63.394	ENSECAG00000023164	-	98	63.357	Equus_caballus
ENSCSEG00000005810	tyw1	57	81.443	ENSEEUG00000005950	-	54	80.612	Erinaceus_europaeus
ENSCSEG00000005810	tyw1	98	74.232	ENSELUG00000008449	tyw1	98	75.115	Esox_lucius
ENSCSEG00000005810	tyw1	94	67.497	ENSFCAG00000014262	-	98	67.222	Felis_catus
ENSCSEG00000005810	tyw1	95	64.463	ENSFALG00000013810	-	99	64.738	Ficedula_albicollis
ENSCSEG00000005810	tyw1	94	64.812	ENSFDAG00000013270	-	98	65.925	Fukomys_damarensis
ENSCSEG00000005810	tyw1	80	77.974	ENSFHEG00000020824	tyw1	81	77.634	Fundulus_heteroclitus
ENSCSEG00000005810	tyw1	97	63.428	ENSGALG00000001110	-	99	64.898	Gallus_gallus
ENSCSEG00000005810	tyw1	95	77.503	ENSGACG00000012692	tyw1	99	78.297	Gasterosteus_aculeatus
ENSCSEG00000005810	tyw1	97	66.389	ENSGAGG00000022393	-	99	67.935	Gopherus_agassizii
ENSCSEG00000005810	tyw1	84	58.642	ENSGGOG00000001473	TYW1	98	59.568	Gorilla_gorilla
ENSCSEG00000005810	tyw1	98	80.831	ENSHBUG00000002640	tyw1	99	79.893	Haplochromis_burtoni
ENSCSEG00000005810	tyw1	84	68.454	ENSHGLG00000012093	-	99	68.139	Heterocephalus_glaber_female
ENSCSEG00000005810	tyw1	94	65.090	ENSHGLG00100011743	TYW1	98	65.229	Heterocephalus_glaber_male
ENSCSEG00000005810	tyw1	97	65.647	ENSHCOG00000019949	tyw1	97	67.082	Hippocampus_comes
ENSCSEG00000005810	tyw1	95	73.343	ENSIPUG00000016330	tyw1	97	73.764	Ictalurus_punctatus
ENSCSEG00000005810	tyw1	99	62.216	ENSSTOG00000004067	-	90	65.460	Ictidomys_tridecemlineatus
ENSCSEG00000005810	tyw1	93	66.245	ENSJJAG00000022959	Tyw1	98	66.341	Jaculus_jaculus
ENSCSEG00000005810	tyw1	98	77.333	ENSKMAG00000018599	tyw1	99	77.333	Kryptolebias_marmoratus
ENSCSEG00000005810	tyw1	98	63.553	ENSLACG00000018917	tyw1	100	64.258	Latimeria_chalumnae
ENSCSEG00000005810	tyw1	98	71.144	ENSLOCG00000004035	tyw1	99	69.814	Lepisosteus_oculatus
ENSCSEG00000005810	tyw1	94	66.574	ENSMFAG00000035457	-	98	67.684	Macaca_fascicularis
ENSCSEG00000005810	tyw1	94	66.574	ENSMMUG00000030374	-	98	67.684	Macaca_mulatta
ENSCSEG00000005810	tyw1	94	66.297	ENSMNEG00000041992	-	98	71.691	Macaca_nemestrina
ENSCSEG00000005810	tyw1	94	66.436	ENSMLEG00000039741	-	98	67.545	Mandrillus_leucophaeus
ENSCSEG00000005810	tyw1	96	82.923	ENSMAMG00000016089	tyw1	98	81.879	Mastacembelus_armatus
ENSCSEG00000005810	tyw1	90	82.799	ENSMZEG00005024386	tyw1	99	82.216	Maylandia_zebra
ENSCSEG00000005810	tyw1	94	65.014	ENSMGAG00000002176	-	98	65.062	Meleagris_gallopavo
ENSCSEG00000005810	tyw1	94	67.041	ENSMAUG00000002959	Tyw1	98	67.041	Mesocricetus_auratus
ENSCSEG00000005810	tyw1	94	67.545	ENSMICG00000014374	-	99	67.635	Microcebus_murinus
ENSCSEG00000005810	tyw1	94	66.667	ENSMOCG00000017720	Tyw1	98	66.667	Microtus_ochrogaster
ENSCSEG00000005810	tyw1	97	75.762	ENSMMOG00000005064	tyw1	99	75.378	Mola_mola
ENSCSEG00000005810	tyw1	94	65.470	ENSMODG00000025697	-	98	66.345	Monodelphis_domestica
ENSCSEG00000005810	tyw1	98	80.452	ENSMALG00000010238	tyw1	100	80.585	Monopterus_albus
ENSCSEG00000005810	tyw1	94	66.480	MGP_CAROLIEiJ_G0027801	Tyw1	98	66.480	Mus_caroli
ENSCSEG00000005810	tyw1	94	66.620	ENSMUSG00000056310	Tyw1	98	66.620	Mus_musculus
ENSCSEG00000005810	tyw1	94	65.634	MGP_PahariEiJ_G0024383	Tyw1	98	66.480	Mus_pahari
ENSCSEG00000005810	tyw1	94	66.199	MGP_SPRETEiJ_G0028799	Tyw1	98	66.199	Mus_spretus
ENSCSEG00000005810	tyw1	87	70.287	ENSMPUG00000016191	-	96	69.289	Mustela_putorius_furo
ENSCSEG00000005810	tyw1	95	63.562	ENSMLUG00000013582	-	98	65.055	Myotis_lucifugus
ENSCSEG00000005810	tyw1	94	66.199	ENSNGAG00000002742	Tyw1	98	66.573	Nannospalax_galili
ENSCSEG00000005810	tyw1	90	80.735	ENSNBRG00000016996	tyw1	98	80.735	Neolamprologus_brichardi
ENSCSEG00000005810	tyw1	94	65.527	ENSNLEG00000013210	-	97	65.881	Nomascus_leucogenys
ENSCSEG00000005810	tyw1	74	67.380	ENSOPRG00000008734	-	87	54.242	Ochotona_princeps
ENSCSEG00000005810	tyw1	86	64.580	ENSODEG00000014729	-	95	62.232	Octodon_degus
ENSCSEG00000005810	tyw1	98	80.537	ENSONIG00000005872	tyw1	99	79.866	Oreochromis_niloticus
ENSCSEG00000005810	tyw1	93	67.039	ENSOCUG00000003173	-	98	66.667	Oryctolagus_cuniculus
ENSCSEG00000005810	tyw1	98	76.005	ENSORLG00000001393	tyw1	99	76.542	Oryzias_latipes
ENSCSEG00000005810	tyw1	98	75.603	ENSORLG00020019361	tyw1	99	76.139	Oryzias_latipes_hni
ENSCSEG00000005810	tyw1	98	75.936	ENSORLG00015008095	tyw1	99	76.604	Oryzias_latipes_hsok
ENSCSEG00000005810	tyw1	87	71.837	ENSOGAG00000016555	-	99	66.712	Otolemur_garnettii
ENSCSEG00000005810	tyw1	94	67.680	ENSOARG00000010673	-	98	66.989	Ovis_aries
ENSCSEG00000005810	tyw1	94	67.827	ENSPPRG00000004945	-	98	67.552	Panthera_pardus
ENSCSEG00000005810	tyw1	94	67.688	ENSPTIG00000019545	-	98	67.413	Panthera_tigris_altaica
ENSCSEG00000005810	tyw1	94	61.634	ENSPTRG00000023076	TYW1B	97	62.604	Pan_troglodytes
ENSCSEG00000005810	tyw1	94	66.297	ENSPANG00000019053	-	98	67.406	Papio_anubis
ENSCSEG00000005810	tyw1	98	68.691	ENSPKIG00000006545	tyw1	99	68.826	Paramormyrops_kingsleyae
ENSCSEG00000005810	tyw1	92	75.994	ENSPMGG00000004240	tyw1	100	75.212	Periophthalmus_magnuspinnatus
ENSCSEG00000005810	tyw1	94	67.364	ENSPEMG00000008274	Tyw1	98	67.364	Peromyscus_maniculatus_bairdii
ENSCSEG00000005810	tyw1	98	75.798	ENSPFOG00000015855	tyw1	99	77.473	Poecilia_formosa
ENSCSEG00000005810	tyw1	98	76.064	ENSPLAG00000000838	tyw1	100	76.587	Poecilia_latipinna
ENSCSEG00000005810	tyw1	98	75.665	ENSPMEG00000019437	tyw1	100	76.190	Poecilia_mexicana
ENSCSEG00000005810	tyw1	98	74.828	ENSPREG00000018773	tyw1	99	76.060	Poecilia_reticulata
ENSCSEG00000005810	tyw1	94	67.545	ENSPPYG00000017514	TYW1	98	67.822	Pongo_abelii
ENSCSEG00000005810	tyw1	94	52.843	ENSPCOG00000015294	-	98	52.144	Propithecus_coquereli
ENSCSEG00000005810	tyw1	98	80.965	ENSPNYG00000022381	tyw1	99	80.027	Pundamilia_nyererei
ENSCSEG00000005810	tyw1	95	74.725	ENSPNAG00000009001	tyw1	99	76.039	Pygocentrus_nattereri
ENSCSEG00000005810	tyw1	94	67.181	ENSRNOG00000024352	Tyw1	98	67.181	Rattus_norvegicus
ENSCSEG00000005810	tyw1	94	66.297	ENSRBIG00000039619	-	98	67.406	Rhinopithecus_bieti
ENSCSEG00000005810	tyw1	94	66.297	ENSRROG00000039780	-	98	67.406	Rhinopithecus_roxellana
ENSCSEG00000005810	tyw1	85	41.239	YPL207W	-	73	40.209	Saccharomyces_cerevisiae
ENSCSEG00000005810	tyw1	94	65.881	ENSSBOG00000025873	-	98	65.326	Saimiri_boliviensis_boliviensis
ENSCSEG00000005810	tyw1	94	66.297	ENSSHAG00000010346	-	99	65.077	Sarcophilus_harrisii
ENSCSEG00000005810	tyw1	97	70.620	ENSSFOG00015001054	tyw1	99	73.105	Scleropages_formosus
ENSCSEG00000005810	tyw1	96	82.520	ENSSMAG00000020514	tyw1	99	80.645	Scophthalmus_maximus
ENSCSEG00000005810	tyw1	98	83.179	ENSSDUG00000001552	tyw1	100	83.069	Seriola_dumerili
ENSCSEG00000005810	tyw1	98	83.311	ENSSLDG00000003554	tyw1	100	83.201	Seriola_lalandi_dorsalis
ENSCSEG00000005810	tyw1	97	66.391	ENSSPUG00000002715	-	100	66.621	Sphenodon_punctatus
ENSCSEG00000005810	tyw1	94	67.220	ENSSSCG00000007733	-	98	66.805	Sus_scrofa
ENSCSEG00000005810	tyw1	86	66.717	ENSTGUG00000003428	-	99	67.020	Taeniopygia_guttata
ENSCSEG00000005810	tyw1	98	79.681	ENSTRUG00000016107	tyw1	98	78.647	Takifugu_rubripes
ENSCSEG00000005810	tyw1	86	84.685	ENSTNIG00000018999	tyw1	100	84.234	Tetraodon_nigroviridis
ENSCSEG00000005810	tyw1	94	67.082	ENSUMAG00000015343	-	100	67.857	Ursus_maritimus
ENSCSEG00000005810	tyw1	94	67.085	ENSVVUG00000016457	-	98	67.270	Vulpes_vulpes
ENSCSEG00000005810	tyw1	95	68.665	ENSXETG00000010094	tyw1	99	68.571	Xenopus_tropicalis
ENSCSEG00000005810	tyw1	98	76.502	ENSXMAG00000013125	tyw1	99	78.711	Xiphophorus_maculatus