EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000005834 (Gene tree)
Gene ID
103386225
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
27809 bases
Position
chr11:8674051-8701859
Accession
103386225
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000009105RRM_1PF00076.222.8e-3312
ENSCSEP00000009105RRM_1PF00076.222.8e-3322
ENSCSEP00000009100RRM_1PF00076.223e-3312
ENSCSEP00000009100RRM_1PF00076.223e-3322
ENSCSEP00000009114RRM_1PF00076.227.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000009212-2299XM_008320402ENSCSEP00000009105350 (aa)XP_008318624UPI000496097A
ENSCSET00000009221-684-ENSCSEP00000009114227 (aa)--
ENSCSET00000009207-5715-ENSCSEP00000009100359 (aa)--
Gene Model
Click here to download ENSCSEG00000005834's gene model file
Pathways
Pathway IDPathway NameSource
csem03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005834's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000005834-5340.107ENSCSEG00000005613HNRNPA36040.107
ENSCSEG00000005834-5445.503ENSCSEG00000011636hnrnpaba7941.593
ENSCSEG00000005834-5135.754ENSCSEG00000003421hnrnpa0b7233.473
ENSCSEG00000005834-10091.429ENSCSEG00000008352-10091.429
ENSCSEG00000005834-5442.857ENSCSEG00000010345-8536.496
ENSCSEG00000005834-5541.117ENSCSEG00000007589hnrnpa1a7141.758
ENSCSEG00000005834-5472.993ENSCSEG00000013549msi2a7772.993
ENSCSEG00000005834-9484.098ENSCSEG00000011032MSI110084.098
ENSCSEG00000005834-5335.135ENSCSEG00000005274tardbpl6035.135
ENSCSEG00000005834-10060.684ENSCSEG00000003266-10060.286
ENSCSEG00000005834-6731.356ENSCSEG00000014051-9331.356
ENSCSEG00000005834-9855.556ENSCSEG00000013557msi2a8356.279
ENSCSEG00000005834-5942.654ENSCSEG00000010909hnrnpd7639.683
ENSCSEG00000005834-5232.927ENSCSEG00000011697-5433.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000005834-10083.516ENSG00000135097MSI110083.516Homo_sapiens
ENSCSEG00000005834-10091.453ENSAPOG00000023458-10091.453Acanthochromis_polyacanthus
ENSCSEG00000005834-10098.286ENSAPOG00000003191MSI110098.286Acanthochromis_polyacanthus
ENSCSEG00000005834-9492.308ENSAMEG00000013302MSI18392.308Ailuropoda_melanoleuca
ENSCSEG00000005834-9494.419ENSACIG00000017754-7694.419Amphilophus_citrinellus
ENSCSEG00000005834-9482.012ENSAOCG00000009031-9582.012Amphiprion_ocellaris
ENSCSEG00000005834-10098.286ENSAOCG00000003804MSI110098.286Amphiprion_ocellaris
ENSCSEG00000005834-10098.286ENSAPEG00000003245MSI110098.286Amphiprion_percula
ENSCSEG00000005834-10091.453ENSAPEG00000006857-8491.453Amphiprion_percula
ENSCSEG00000005834-10087.115ENSATEG00000017059MSI110087.115Anabas_testudineus
ENSCSEG00000005834-10090.395ENSATEG00000023779-10090.395Anabas_testudineus
ENSCSEG00000005834-10082.597ENSACAG00000002762MSI110083.425Anolis_carolinensis
ENSCSEG00000005834-10083.516ENSANAG00000027151MSI110083.516Aotus_nancymaae
ENSCSEG00000005834-8282.986ENSANAG00000027901-8882.986Aotus_nancymaae
ENSCSEG00000005834-10091.714ENSACLG00000000117-10092.661Astatotilapia_calliptera
ENSCSEG00000005834-10097.436ENSACLG00000011230MSI110097.436Astatotilapia_calliptera
ENSCSEG00000005834-9687.442ENSAMXG00000038960msi17689.342Astyanax_mexicanus
ENSCSEG00000005834-10083.516ENSBTAG00000009800MSI110085.630Bos_taurus
ENSCSEG00000005834-10083.516ENSCJAG00000008578MSI110083.516Callithrix_jacchus
ENSCSEG00000005834-10083.242ENSCAFG00000010283MSI110083.242Canis_familiaris
ENSCSEG00000005834-9485.531ENSCAFG00020020585MSI110085.531Canis_lupus_dingo
ENSCSEG00000005834-10081.843ENSCHIG00000024304MSI110081.843Capra_hircus
ENSCSEG00000005834-9881.857ENSTSYG00000033949MSI19585.015Carlito_syrichta
ENSCSEG00000005834-9485.714ENSCAPG00000003919MSI17885.714Cavia_aperea
ENSCSEG00000005834-9485.673ENSCPOG00000012361MSI110085.673Cavia_porcellus
ENSCSEG00000005834-10083.516ENSCCAG00000035567MSI110083.516Cebus_capucinus
ENSCSEG00000005834-10083.516ENSCATG00000030019MSI110083.516Cercocebus_atys
ENSCSEG00000005834-9485.673ENSCLAG00000011329MSI110085.673Chinchilla_lanigera
ENSCSEG00000005834-7881.720ENSCSAG00000002265MSI19681.720Chlorocebus_sabaeus
ENSCSEG00000005834-10086.402ENSCPBG00000011349MSI110086.402Chrysemys_picta_bellii
ENSCSEG00000005834-9485.061ENSCANG00000040651MSI110085.061Colobus_angolensis_palliatus
ENSCSEG00000005834-10083.516ENSCGRG00001018883Msi110083.516Cricetulus_griseus_chok1gshd
ENSCSEG00000005834-9485.106ENSCGRG00000002191Msi17285.106Cricetulus_griseus_crigri
ENSCSEG00000005834-9877.922ENSCVAG00000017463-9577.922Cyprinodon_variegatus
ENSCSEG00000005834-5173.134ENSCVAG00000017430zgc:1107969473.134Cyprinodon_variegatus
ENSCSEG00000005834-10092.000ENSCVAG00000009100MSI110092.000Cyprinodon_variegatus
ENSCSEG00000005834-9490.654ENSDARG00000102015CABZ01037298.19890.233Danio_rerio
ENSCSEG00000005834-9485.079ENSDARG00000010710msi110092.523Danio_rerio
ENSCSEG00000005834-9481.962ENSDNOG00000005713MSI19181.962Dasypus_novemcinctus
ENSCSEG00000005834-9484.431ENSDORG00000005610Msi19484.431Dipodomys_ordii
ENSCSEG00000005834-9482.012ENSETEG00000004756MSI110082.012Echinops_telfairi
ENSCSEG00000005834-10083.516ENSEASG00005004736MSI110083.516Equus_asinus_asinus
ENSCSEG00000005834-10083.516ENSECAG00000017526MSI110083.516Equus_caballus
ENSCSEG00000005834-9486.239ENSELUG00000023280-10085.933Esox_lucius
ENSCSEG00000005834-9485.100ENSELUG00000023219MSI19285.100Esox_lucius
ENSCSEG00000005834-10083.516ENSFCAG00000011007MSI110083.516Felis_catus
ENSCSEG00000005834-9488.000ENSFALG00000007574MSI110088.000Ficedula_albicollis
ENSCSEG00000005834-9484.756ENSFDAG00000019586MSI110084.756Fukomys_damarensis
ENSCSEG00000005834-10091.738ENSFHEG00000022446MSI110091.738Fundulus_heteroclitus
ENSCSEG00000005834-10097.143ENSFHEG00000003560-10097.143Fundulus_heteroclitus
ENSCSEG00000005834-10090.571ENSGMOG00000001006MSI19990.286Gadus_morhua
ENSCSEG00000005834-10085.352ENSGMOG00000017838-10085.352Gadus_morhua
ENSCSEG00000005834-9488.550ENSGALG00000007227MSI19874.555Gallus_gallus
ENSCSEG00000005834-10070.822ENSGAFG00000005860-10070.822Gambusia_affinis
ENSCSEG00000005834-9496.951ENSGAFG00000021522MSI19496.951Gambusia_affinis
ENSCSEG00000005834-10089.744ENSGACG00000012679MSI110089.744Gasterosteus_aculeatus
ENSCSEG00000005834-10087.603ENSGACG00000008674-10087.603Gasterosteus_aculeatus
ENSCSEG00000005834-10086.119ENSGAGG00000016037MSI110086.119Gopherus_agassizii
ENSCSEG00000005834-9485.350ENSGGOG00000010328MSI110085.350Gorilla_gorilla
ENSCSEG00000005834-10091.714ENSHBUG00000011841-10091.714Haplochromis_burtoni
ENSCSEG00000005834-10097.436ENSHBUG00000021921MSI110097.436Haplochromis_burtoni
ENSCSEG00000005834-10083.242ENSHGLG00000012782MSI110083.242Heterocephalus_glaber_female
ENSCSEG00000005834-9484.756ENSHGLG00100016848MSI110084.756Heterocephalus_glaber_male
ENSCSEG00000005834-10087.288ENSHCOG00000012067-10087.288Hippocampus_comes
ENSCSEG00000005834-9095.223ENSHCOG00000012019MSI19595.238Hippocampus_comes
ENSCSEG00000005834-10087.464ENSIPUG00000001976msi110087.464Ictalurus_punctatus
ENSCSEG00000005834-9485.531ENSSTOG00000009799MSI110085.531Ictidomys_tridecemlineatus
ENSCSEG00000005834-10083.516ENSJJAG00000010463Msi110083.516Jaculus_jaculus
ENSCSEG00000005834-10072.571ENSJJAG00000010643-10070.914Jaculus_jaculus
ENSCSEG00000005834-10092.000ENSKMAG00000011251MSI110092.000Kryptolebias_marmoratus
ENSCSEG00000005834-9492.049ENSKMAG00000019877-10092.049Kryptolebias_marmoratus
ENSCSEG00000005834-10098.286ENSLBEG00000001375-10098.286Labrus_bergylta
ENSCSEG00000005834-10091.738ENSLBEG00000008789MSI110091.738Labrus_bergylta
ENSCSEG00000005834-9482.267ENSLACG00000018287MSI110082.267Latimeria_chalumnae
ENSCSEG00000005834-5276.786ENSLOCG00000008618zgc:1107967176.786Lepisosteus_oculatus
ENSCSEG00000005834-9482.174ENSLAFG00000009412MSI110076.133Loxodonta_africana
ENSCSEG00000005834-9485.673ENSMFAG00000001798MSI110085.673Macaca_fascicularis
ENSCSEG00000005834-9485.673ENSMMUG00000031527MSI19684.770Macaca_mulatta
ENSCSEG00000005834-10083.516ENSMNEG00000040034MSI110083.516Macaca_nemestrina
ENSCSEG00000005834-9485.061ENSMLEG00000003921MSI110085.061Mandrillus_leucophaeus
ENSCSEG00000005834-10090.857ENSMAMG00000002279MSI110090.857Mastacembelus_armatus
ENSCSEG00000005834-10097.429ENSMAMG00000018426-10097.429Mastacembelus_armatus
ENSCSEG00000005834-10091.714ENSMZEG00005000340-10091.714Maylandia_zebra
ENSCSEG00000005834-10097.436ENSMZEG00005026892MSI110097.436Maylandia_zebra
ENSCSEG00000005834-6391.124ENSMGAG00000016518-10091.124Meleagris_gallopavo
ENSCSEG00000005834-6988.017ENSMAUG00000016820Msi19988.017Mesocricetus_auratus
ENSCSEG00000005834-10083.516ENSMICG00000033181MSI110083.516Microcebus_murinus
ENSCSEG00000005834-10083.242ENSMOCG00000002286Msi110083.242Microtus_ochrogaster
ENSCSEG00000005834-9480.793ENSMMOG00000010492MSI19680.793Mola_mola
ENSCSEG00000005834-10086.000ENSMMOG00000012265-10086.000Mola_mola
ENSCSEG00000005834-9058.133ENSMODG00000003189-10058.133Monodelphis_domestica
ENSCSEG00000005834-9695.327ENSMALG00000001426-10096.942Monopterus_albus
ENSCSEG00000005834-10091.714ENSMALG00000017889MSI110091.714Monopterus_albus
ENSCSEG00000005834-10082.967MGP_CAROLIEiJ_G0027626Msi110082.967Mus_caroli
ENSCSEG00000005834-10082.967ENSMUSG00000054256Msi19987.654Mus_musculus
ENSCSEG00000005834-10085.795MGP_PahariEiJ_G0024206Msi110085.795Mus_pahari
ENSCSEG00000005834-10082.967MGP_SPRETEiJ_G0028624Msi110082.967Mus_spretus
ENSCSEG00000005834-9485.531ENSMPUG00000003168MSI110085.531Mustela_putorius_furo
ENSCSEG00000005834-9476.190ENSMLUG00000010313MSI110076.190Myotis_lucifugus
ENSCSEG00000005834-9485.106ENSNGAG00000014508Msi19185.106Nannospalax_galili
ENSCSEG00000005834-10091.714ENSNBRG00000000841-10091.714Neolamprologus_brichardi
ENSCSEG00000005834-9991.489ENSNBRG00000018012MSI19987.705Neolamprologus_brichardi
ENSCSEG00000005834-9075.610ENSNLEG00000015636MSI110075.610Nomascus_leucogenys
ENSCSEG00000005834-9466.228ENSMEUG00000015759MSI110065.244Notamacropus_eugenii
ENSCSEG00000005834-9077.778ENSOPRG00000016879MSI110077.778Ochotona_princeps
ENSCSEG00000005834-9485.061ENSODEG00000006328MSI110085.061Octodon_degus
ENSCSEG00000005834-10091.714ENSONIG00000011182MSI110091.714Oreochromis_niloticus
ENSCSEG00000005834-10094.231ENSONIG00000019452-10094.231Oreochromis_niloticus
ENSCSEG00000005834-9485.852ENSOCUG00000027716MSI110085.852Oryctolagus_cuniculus
ENSCSEG00000005834-10096.571ENSORLG00000029593MSI110096.571Oryzias_latipes
ENSCSEG00000005834-10091.168ENSORLG00000019978-10091.168Oryzias_latipes
ENSCSEG00000005834-10096.571ENSORLG00020008266MSI19989.881Oryzias_latipes_hni
ENSCSEG00000005834-10091.168ENSORLG00020001208-7191.168Oryzias_latipes_hni
ENSCSEG00000005834-10091.168ENSORLG00015013672-7686.325Oryzias_latipes_hsok
ENSCSEG00000005834-10096.571ENSORLG00015003916MSI110096.571Oryzias_latipes_hsok
ENSCSEG00000005834-10091.453ENSOMEG00000017536MSI110091.453Oryzias_melastigma
ENSCSEG00000005834-10096.857ENSOMEG00000002272-10096.857Oryzias_melastigma
ENSCSEG00000005834-9981.868ENSOGAG00000003847MSI19981.868Otolemur_garnettii
ENSCSEG00000005834-9482.424ENSOARG00000012097MSI110082.424Ovis_aries
ENSCSEG00000005834-9485.061ENSPPAG00000043073MSI110085.061Pan_paniscus
ENSCSEG00000005834-10083.516ENSPPRG00000000370MSI110083.516Panthera_pardus
ENSCSEG00000005834-9485.531ENSPTIG00000008913MSI110085.531Panthera_tigris_altaica
ENSCSEG00000005834-10083.516ENSPTRG00000005531MSI110083.516Pan_troglodytes
ENSCSEG00000005834-10083.242ENSPANG00000006335MSI110083.242Papio_anubis
ENSCSEG00000005834-10093.143ENSPKIG00000016497MSI110093.143Paramormyrops_kingsleyae
ENSCSEG00000005834-10090.286ENSPKIG00000023575-10090.286Paramormyrops_kingsleyae
ENSCSEG00000005834-9485.671ENSPSIG00000011608-9385.671Pelodiscus_sinensis
ENSCSEG00000005834-9481.938ENSPSIG00000009621-10081.579Pelodiscus_sinensis
ENSCSEG00000005834-9086.667ENSPMGG00000000514MSI19985.404Periophthalmus_magnuspinnatus
ENSCSEG00000005834-9476.970ENSPMGG00000007743-9871.552Periophthalmus_magnuspinnatus
ENSCSEG00000005834-9484.211ENSPEMG00000010491Msi19583.680Peromyscus_maniculatus_bairdii
ENSCSEG00000005834-10097.714ENSPFOG00000008319-8697.714Poecilia_formosa
ENSCSEG00000005834-10091.453ENSPFOG00000013113MSI110091.453Poecilia_formosa
ENSCSEG00000005834-10091.453ENSPLAG00000014025-10091.453Poecilia_latipinna
ENSCSEG00000005834-10097.714ENSPLAG00000012431-9797.714Poecilia_latipinna
ENSCSEG00000005834-10091.453ENSPMEG00000012796MSI110091.453Poecilia_mexicana
ENSCSEG00000005834-10097.143ENSPMEG00000007025-8697.143Poecilia_mexicana
ENSCSEG00000005834-9379.186ENSPREG00000014574-10079.186Poecilia_reticulata
ENSCSEG00000005834-9890.987ENSPREG00000021416-9886.880Poecilia_reticulata
ENSCSEG00000005834-10082.692ENSPPYG00000005027MSI110082.692Pongo_abelii
ENSCSEG00000005834-7688.832ENSPCAG00000002300MSI17288.832Procavia_capensis
ENSCSEG00000005834-10083.516ENSPCOG00000017341MSI110083.516Propithecus_coquereli
ENSCSEG00000005834-9468.598ENSPVAG00000002225MSI110068.598Pteropus_vampyrus
ENSCSEG00000005834-10091.714ENSPNYG00000002529-10091.714Pundamilia_nyererei
ENSCSEG00000005834-10097.436ENSPNYG00000004379MSI110097.436Pundamilia_nyererei
ENSCSEG00000005834-10088.604ENSPNAG00000019337msi110088.604Pygocentrus_nattereri
ENSCSEG00000005834-9485.209ENSRNOG00000001156Msi110085.209Rattus_norvegicus
ENSCSEG00000005834-9485.531ENSRBIG00000036889MSI110085.531Rhinopithecus_bieti
ENSCSEG00000005834-9484.848ENSRROG00000041076MSI19384.848Rhinopithecus_roxellana
ENSCSEG00000005834-9485.673ENSSBOG00000030259MSI19985.673Saimiri_boliviensis_boliviensis
ENSCSEG00000005834-9473.856ENSSHAG00000006834MSI110073.856Sarcophilus_harrisii
ENSCSEG00000005834-9492.145ENSSFOG00015005350MSI19692.145Scleropages_formosus
ENSCSEG00000005834-9693.925ENSSFOG00015014964-9594.817Scleropages_formosus
ENSCSEG00000005834-9487.025ENSSMAG00000018824MSI19787.025Scophthalmus_maximus
ENSCSEG00000005834-9496.729ENSSMAG00000009156-7694.836Scophthalmus_maximus
ENSCSEG00000005834-10098.571ENSSDUG00000022697-10098.571Seriola_dumerili
ENSCSEG00000005834-10091.453ENSSDUG00000001027MSI110091.453Seriola_dumerili
ENSCSEG00000005834-10083.516ENSSLDG00000018706-10083.516Seriola_lalandi_dorsalis
ENSCSEG00000005834-10091.453ENSSLDG00000016832MSI110091.453Seriola_lalandi_dorsalis
ENSCSEG00000005834-10085.552ENSSPUG00000015741MSI110085.552Sphenodon_punctatus
ENSCSEG00000005834-9373.333ENSSPAG00000014085-10073.333Stegastes_partitus
ENSCSEG00000005834-5580.247ENSSPAG00000015573zgc:1107968280.247Stegastes_partitus
ENSCSEG00000005834-9697.674ENSSPAG00000013098-10098.476Stegastes_partitus
ENSCSEG00000005834-10083.242ENSSSCG00000029365MSI110085.209Sus_scrofa
ENSCSEG00000005834-9485.588ENSTGUG00000009534MSI110085.588Taeniopygia_guttata
ENSCSEG00000005834-9484.762ENSTRUG00000015636-7984.762Takifugu_rubripes
ENSCSEG00000005834-9490.654ENSTRUG00000016249MSI110080.632Takifugu_rubripes
ENSCSEG00000005834-5081.818ENSTRUG00000021586-9981.818Takifugu_rubripes
ENSCSEG00000005834-10086.402ENSTNIG00000011469MSI110086.402Tetraodon_nigroviridis
ENSCSEG00000005834-9666.176ENSTNIG00000019814-9766.176Tetraodon_nigroviridis
ENSCSEG00000005834-9476.923ENSTBEG00000007182MSI110076.557Tupaia_belangeri
ENSCSEG00000005834-7687.594ENSTTRG00000005663MSI17887.594Tursiops_truncatus
ENSCSEG00000005834-7186.574ENSUAMG00000015514MSI19486.574Ursus_americanus
ENSCSEG00000005834-9482.410ENSUMAG00000006176MSI18882.410Ursus_maritimus
ENSCSEG00000005834-9485.106ENSVVUG00000020993MSI110084.384Vulpes_vulpes
ENSCSEG00000005834-10082.571ENSXETG00000012216msi110082.857Xenopus_tropicalis
ENSCSEG00000005834-9488.318ENSXCOG00000017605MSI18979.573Xiphophorus_couchianus
ENSCSEG00000005834-10097.429ENSXMAG00000018237-10097.429Xiphophorus_maculatus
ENSCSEG00000005834-10092.000ENSXMAG00000027103MSI110079.832Xiphophorus_maculatus

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