EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000005952 (Gene tree)
Gene ID: 103382592
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13328 bases
Position: chr8:18472603-18485930
Accession: 103382592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009272	Xpo1	PF08389.12	6.5e-25	1	1
ENSCSEP00000009282	Xpo1	PF08389.12	2.8e-22	1	1
ENSCSEP00000009282	IBN_N	PF03810.19	3.9e-05	1	1
ENSCSEP00000009272	IBN_N	PF03810.19	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009381	-	7705	XM_008315431	ENSCSEP00000009272	923 (aa)	XP_008313653	UPI0004961C00
ENSCSET00000009391	-	1320	-	ENSCSEP00000009282	439 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000005952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000005952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000005952	tnpo3	100	84.940	ENSG00000064419	TNPO3	100	84.947	Homo_sapiens
ENSCSEG00000005952	tnpo3	100	94.366	ENSAPOG00000018347	tnpo3	100	94.366	Acanthochromis_polyacanthus
ENSCSEG00000005952	tnpo3	99	81.828	ENSAMEG00000005135	TNPO3	98	81.828	Ailuropoda_melanoleuca
ENSCSEG00000005952	tnpo3	96	91.959	ENSACIG00000005897	tnpo3	100	91.348	Amphilophus_citrinellus
ENSCSEG00000005952	tnpo3	100	94.366	ENSAOCG00000008264	tnpo3	100	94.366	Amphiprion_ocellaris
ENSCSEG00000005952	tnpo3	96	94.337	ENSAPEG00000024300	tnpo3	100	94.337	Amphiprion_percula
ENSCSEG00000005952	tnpo3	100	94.475	ENSATEG00000003197	tnpo3	100	94.475	Anabas_testudineus
ENSCSEG00000005952	tnpo3	91	77.500	ENSAPLG00000005946	TNPO3	91	81.967	Anas_platyrhynchos
ENSCSEG00000005952	tnpo3	96	79.762	ENSACAG00000013470	TNPO3	95	83.816	Anolis_carolinensis
ENSCSEG00000005952	tnpo3	100	84.940	ENSANAG00000037940	TNPO3	100	84.940	Aotus_nancymaae
ENSCSEG00000005952	tnpo3	100	93.824	ENSACLG00000005561	tnpo3	100	93.824	Astatotilapia_calliptera
ENSCSEG00000005952	tnpo3	100	91.333	ENSAMXG00000016236	tnpo3	100	91.333	Astyanax_mexicanus
ENSCSEG00000005952	tnpo3	100	85.049	ENSBTAG00000004992	TNPO3	100	85.064	Bos_taurus
ENSCSEG00000005952	tnpo3	100	85.049	ENSCJAG00000018085	TNPO3	100	85.049	Callithrix_jacchus
ENSCSEG00000005952	tnpo3	100	84.940	ENSCAFG00000001543	TNPO3	100	84.940	Canis_familiaris
ENSCSEG00000005952	tnpo3	100	84.940	ENSCAFG00020022462	TNPO3	99	84.557	Canis_lupus_dingo
ENSCSEG00000005952	tnpo3	100	84.940	ENSCHIG00000011721	TNPO3	100	84.940	Capra_hircus
ENSCSEG00000005952	tnpo3	100	85.049	ENSTSYG00000002989	TNPO3	100	85.049	Carlito_syrichta
ENSCSEG00000005952	tnpo3	72	82.796	ENSCAPG00000005843	TNPO3	91	82.796	Cavia_aperea
ENSCSEG00000005952	tnpo3	100	84.507	ENSCPOG00000039784	TNPO3	100	84.507	Cavia_porcellus
ENSCSEG00000005952	tnpo3	100	85.049	ENSCCAG00000033826	TNPO3	100	85.064	Cebus_capucinus
ENSCSEG00000005952	tnpo3	100	84.940	ENSCATG00000030018	TNPO3	100	84.947	Cercocebus_atys
ENSCSEG00000005952	tnpo3	100	84.035	ENSCLAG00000016298	TNPO3	100	84.035	Chinchilla_lanigera
ENSCSEG00000005952	tnpo3	100	85.049	ENSCSAG00000009966	TNPO3	100	85.049	Chlorocebus_sabaeus
ENSCSEG00000005952	tnpo3	99	60.673	ENSCHOG00000011547	TNPO3	99	60.673	Choloepus_hoffmanni
ENSCSEG00000005952	tnpo3	93	83.781	ENSCPBG00000017497	TNPO3	100	83.781	Chrysemys_picta_bellii
ENSCSEG00000005952	tnpo3	96	54.265	ENSCING00000005042	-	99	48.693	Ciona_intestinalis
ENSCSEG00000005952	tnpo3	96	53.207	ENSCSAVG00000008623	-	94	54.545	Ciona_savignyi
ENSCSEG00000005952	tnpo3	100	84.940	ENSCANG00000033070	TNPO3	100	84.947	Colobus_angolensis_palliatus
ENSCSEG00000005952	tnpo3	100	84.832	ENSCGRG00001015925	Tnpo3	100	84.832	Cricetulus_griseus_chok1gshd
ENSCSEG00000005952	tnpo3	100	84.832	ENSCGRG00000010379	Tnpo3	100	84.832	Cricetulus_griseus_crigri
ENSCSEG00000005952	tnpo3	100	92.958	ENSCVAG00000020285	tnpo3	100	92.958	Cyprinodon_variegatus
ENSCSEG00000005952	tnpo3	100	89.924	ENSDARG00000045680	tnpo3	100	89.924	Danio_rerio
ENSCSEG00000005952	tnpo3	100	84.832	ENSDNOG00000002556	TNPO3	100	84.832	Dasypus_novemcinctus
ENSCSEG00000005952	tnpo3	99	82.028	ENSDORG00000002433	Tnpo3	95	84.111	Dipodomys_ordii
ENSCSEG00000005952	tnpo3	99	43.380	FBgn0031456	Tnpo-SR	99	43.380	Drosophila_melanogaster
ENSCSEG00000005952	tnpo3	99	81.797	ENSETEG00000002101	TNPO3	90	84.835	Echinops_telfairi
ENSCSEG00000005952	tnpo3	100	70.748	ENSEBUG00000016931	tnpo3	100	70.748	Eptatretus_burgeri
ENSCSEG00000005952	tnpo3	100	84.832	ENSEASG00005008677	TNPO3	100	84.832	Equus_asinus_asinus
ENSCSEG00000005952	tnpo3	100	84.832	ENSECAG00000012815	TNPO3	100	84.832	Equus_caballus
ENSCSEG00000005952	tnpo3	61	31.280	ENSEEUG00000011681	IPO13	74	30.942	Erinaceus_europaeus
ENSCSEG00000005952	tnpo3	99	80.876	ENSEEUG00000005178	TNPO3	98	79.681	Erinaceus_europaeus
ENSCSEG00000005952	tnpo3	99	93.036	ENSELUG00000012153	tnpo3	99	93.036	Esox_lucius
ENSCSEG00000005952	tnpo3	100	84.940	ENSFCAG00000018186	TNPO3	100	84.947	Felis_catus
ENSCSEG00000005952	tnpo3	96	80.045	ENSFALG00000010667	TNPO3	100	80.045	Ficedula_albicollis
ENSCSEG00000005952	tnpo3	100	84.973	ENSFDAG00000019578	TNPO3	100	84.973	Fukomys_damarensis
ENSCSEG00000005952	tnpo3	100	92.416	ENSFHEG00000012859	tnpo3	100	92.416	Fundulus_heteroclitus
ENSCSEG00000005952	tnpo3	100	91.333	ENSGMOG00000007324	tnpo3	100	91.333	Gadus_morhua
ENSCSEG00000005952	tnpo3	98	80.324	ENSGALG00000039420	TNPO3	98	83.808	Gallus_gallus
ENSCSEG00000005952	tnpo3	69	86.093	ENSGAFG00000017639	tnpo3	100	90.378	Gambusia_affinis
ENSCSEG00000005952	tnpo3	100	93.499	ENSGACG00000000699	tnpo3	100	93.499	Gasterosteus_aculeatus
ENSCSEG00000005952	tnpo3	93	83.664	ENSGAGG00000006777	TNPO3	100	83.664	Gopherus_agassizii
ENSCSEG00000005952	tnpo3	100	84.940	ENSGGOG00000008339	TNPO3	100	84.947	Gorilla_gorilla
ENSCSEG00000005952	tnpo3	100	93.824	ENSHBUG00000008351	tnpo3	100	93.824	Haplochromis_burtoni
ENSCSEG00000005952	tnpo3	100	85.049	ENSHGLG00000004463	TNPO3	100	85.049	Heterocephalus_glaber_female
ENSCSEG00000005952	tnpo3	100	85.049	ENSHGLG00100005509	TNPO3	100	85.049	Heterocephalus_glaber_male
ENSCSEG00000005952	tnpo3	100	90.683	ENSHCOG00000007221	tnpo3	100	90.683	Hippocampus_comes
ENSCSEG00000005952	tnpo3	100	89.382	ENSIPUG00000014979	TNPO3	99	89.382	Ictalurus_punctatus
ENSCSEG00000005952	tnpo3	100	84.832	ENSSTOG00000004885	TNPO3	100	84.832	Ictidomys_tridecemlineatus
ENSCSEG00000005952	tnpo3	100	78.710	ENSJJAG00000013530	Tnpo3	100	78.710	Jaculus_jaculus
ENSCSEG00000005952	tnpo3	100	93.174	ENSKMAG00000010497	tnpo3	100	93.174	Kryptolebias_marmoratus
ENSCSEG00000005952	tnpo3	96	92.072	ENSLBEG00000016595	tnpo3	100	92.072	Labrus_bergylta
ENSCSEG00000005952	tnpo3	96	89.807	ENSLBEG00000011988	-	99	89.807	Labrus_bergylta
ENSCSEG00000005952	tnpo3	83	87.031	ENSLACG00000002351	TNPO3	99	87.031	Latimeria_chalumnae
ENSCSEG00000005952	tnpo3	100	90.358	ENSLOCG00000015556	tnpo3	100	90.358	Lepisosteus_oculatus
ENSCSEG00000005952	tnpo3	100	84.250	ENSLAFG00000002738	TNPO3	100	84.250	Loxodonta_africana
ENSCSEG00000005952	tnpo3	100	84.940	ENSMFAG00000032385	TNPO3	100	84.947	Macaca_fascicularis
ENSCSEG00000005952	tnpo3	100	84.940	ENSMMUG00000004311	TNPO3	100	84.947	Macaca_mulatta
ENSCSEG00000005952	tnpo3	100	84.940	ENSMNEG00000045277	TNPO3	100	84.947	Macaca_nemestrina
ENSCSEG00000005952	tnpo3	100	84.940	ENSMLEG00000037881	TNPO3	100	84.947	Mandrillus_leucophaeus
ENSCSEG00000005952	tnpo3	100	94.258	ENSMAMG00000021096	tnpo3	100	94.258	Mastacembelus_armatus
ENSCSEG00000005952	tnpo3	100	93.824	ENSMZEG00005015084	tnpo3	100	93.824	Maylandia_zebra
ENSCSEG00000005952	tnpo3	91	78.894	ENSMGAG00000002839	TNPO3	99	79.586	Meleagris_gallopavo
ENSCSEG00000005952	tnpo3	100	84.724	ENSMAUG00000013463	Tnpo3	100	84.724	Mesocricetus_auratus
ENSCSEG00000005952	tnpo3	100	84.940	ENSMICG00000000140	TNPO3	100	84.940	Microcebus_murinus
ENSCSEG00000005952	tnpo3	70	33.077	ENSMICG00000011003	IPO13	93	33.728	Microcebus_murinus
ENSCSEG00000005952	tnpo3	100	84.832	ENSMOCG00000013264	Tnpo3	100	84.832	Microtus_ochrogaster
ENSCSEG00000005952	tnpo3	100	93.499	ENSMMOG00000005887	tnpo3	100	93.499	Mola_mola
ENSCSEG00000005952	tnpo3	100	85.374	ENSMODG00000014700	TNPO3	100	85.374	Monodelphis_domestica
ENSCSEG00000005952	tnpo3	100	93.608	ENSMALG00000006675	tnpo3	100	93.608	Monopterus_albus
ENSCSEG00000005952	tnpo3	100	84.724	MGP_CAROLIEiJ_G0028176	Tnpo3	100	84.724	Mus_caroli
ENSCSEG00000005952	tnpo3	100	84.724	ENSMUSG00000012535	Tnpo3	100	84.724	Mus_musculus
ENSCSEG00000005952	tnpo3	100	84.724	MGP_PahariEiJ_G0021934	Tnpo3	100	84.724	Mus_pahari
ENSCSEG00000005952	tnpo3	100	84.615	MGP_SPRETEiJ_G0029176	Tnpo3	100	84.615	Mus_spretus
ENSCSEG00000005952	tnpo3	100	84.940	ENSMPUG00000006021	TNPO3	100	84.940	Mustela_putorius_furo
ENSCSEG00000005952	tnpo3	100	76.490	ENSMLUG00000000947	TNPO3	100	76.490	Myotis_lucifugus
ENSCSEG00000005952	tnpo3	100	84.832	ENSNGAG00000008722	Tnpo3	100	84.832	Nannospalax_galili
ENSCSEG00000005952	tnpo3	100	92.199	ENSNBRG00000019001	tnpo3	100	93.574	Neolamprologus_brichardi
ENSCSEG00000005952	tnpo3	100	81.818	ENSNLEG00000012491	TNPO3	100	81.818	Nomascus_leucogenys
ENSCSEG00000005952	tnpo3	83	84.553	ENSMEUG00000002445	TNPO3	91	71.689	Notamacropus_eugenii
ENSCSEG00000005952	tnpo3	91	85.870	ENSOPRG00000006163	TNPO3	89	86.441	Ochotona_princeps
ENSCSEG00000005952	tnpo3	98	84.812	ENSODEG00000012826	TNPO3	100	84.812	Octodon_degus
ENSCSEG00000005952	tnpo3	100	94.041	ENSONIG00000007604	tnpo3	100	94.041	Oreochromis_niloticus
ENSCSEG00000005952	tnpo3	95	81.433	ENSOANG00000011451	TNPO3	100	81.433	Ornithorhynchus_anatinus
ENSCSEG00000005952	tnpo3	99	82.028	ENSOCUG00000010105	TNPO3	99	81.828	Oryctolagus_cuniculus
ENSCSEG00000005952	tnpo3	100	92.091	ENSORLG00000029369	tnpo3	100	92.091	Oryzias_latipes
ENSCSEG00000005952	tnpo3	100	92.091	ENSORLG00020003464	tnpo3	100	92.091	Oryzias_latipes_hni
ENSCSEG00000005952	tnpo3	100	92.199	ENSORLG00015002610	tnpo3	100	92.199	Oryzias_latipes_hsok
ENSCSEG00000005952	tnpo3	100	92.633	ENSOMEG00000021006	tnpo3	100	92.633	Oryzias_melastigma
ENSCSEG00000005952	tnpo3	100	84.940	ENSOGAG00000015340	TNPO3	100	84.940	Otolemur_garnettii
ENSCSEG00000005952	tnpo3	100	84.940	ENSOARG00000004026	TNPO3	100	84.940	Ovis_aries
ENSCSEG00000005952	tnpo3	100	84.940	ENSPPAG00000034975	TNPO3	100	84.947	Pan_paniscus
ENSCSEG00000005952	tnpo3	100	84.940	ENSPPRG00000002050	TNPO3	100	84.940	Panthera_pardus
ENSCSEG00000005952	tnpo3	100	84.940	ENSPTIG00000016167	TNPO3	100	84.940	Panthera_tigris_altaica
ENSCSEG00000005952	tnpo3	100	84.940	ENSPTRG00000019676	TNPO3	100	84.947	Pan_troglodytes
ENSCSEG00000005952	tnpo3	98	84.751	ENSPANG00000022226	TNPO3	100	84.493	Papio_anubis
ENSCSEG00000005952	tnpo3	100	84.773	ENSPKIG00000008628	-	100	84.773	Paramormyrops_kingsleyae
ENSCSEG00000005952	tnpo3	100	87.974	ENSPKIG00000023234	tnpo3	100	87.974	Paramormyrops_kingsleyae
ENSCSEG00000005952	tnpo3	84	77.989	ENSPSIG00000006156	-	94	81.572	Pelodiscus_sinensis
ENSCSEG00000005952	tnpo3	90	87.909	ENSPMGG00000009763	tnpo3	99	85.739	Periophthalmus_magnuspinnatus
ENSCSEG00000005952	tnpo3	100	84.724	ENSPEMG00000000422	Tnpo3	100	84.724	Peromyscus_maniculatus_bairdii
ENSCSEG00000005952	tnpo3	95	71.914	ENSPMAG00000008621	tnpo3	100	71.914	Petromyzon_marinus
ENSCSEG00000005952	tnpo3	100	85.049	ENSPCIG00000011366	TNPO3	100	85.049	Phascolarctos_cinereus
ENSCSEG00000005952	tnpo3	100	91.766	ENSPFOG00000013592	tnpo3	99	91.766	Poecilia_formosa
ENSCSEG00000005952	tnpo3	100	91.766	ENSPLAG00000010188	tnpo3	100	91.766	Poecilia_latipinna
ENSCSEG00000005952	tnpo3	100	91.874	ENSPMEG00000022731	tnpo3	100	91.874	Poecilia_mexicana
ENSCSEG00000005952	tnpo3	69	86.093	ENSPREG00000019847	tnpo3	100	90.378	Poecilia_reticulata
ENSCSEG00000005952	tnpo3	100	84.940	ENSPPYG00000017990	TNPO3	100	84.940	Pongo_abelii
ENSCSEG00000005952	tnpo3	99	75.761	ENSPCAG00000010158	TNPO3	98	75.761	Procavia_capensis
ENSCSEG00000005952	tnpo3	87	85.197	ENSPCOG00000023901	TNPO3	96	85.197	Propithecus_coquereli
ENSCSEG00000005952	tnpo3	99	81.567	ENSPVAG00000015757	TNPO3	98	78.887	Pteropus_vampyrus
ENSCSEG00000005952	tnpo3	100	93.824	ENSPNYG00000002349	tnpo3	100	93.824	Pundamilia_nyererei
ENSCSEG00000005952	tnpo3	100	92.199	ENSPNAG00000001142	tnpo3	100	92.199	Pygocentrus_nattereri
ENSCSEG00000005952	tnpo3	100	84.832	ENSRNOG00000021758	Tnpo3	100	84.832	Rattus_norvegicus
ENSCSEG00000005952	tnpo3	100	84.940	ENSRBIG00000042549	TNPO3	100	84.947	Rhinopithecus_bieti
ENSCSEG00000005952	tnpo3	100	84.940	ENSRROG00000039264	TNPO3	100	84.940	Rhinopithecus_roxellana
ENSCSEG00000005952	tnpo3	99	73.272	ENSSBOG00000029642	TNPO3	100	76.541	Saimiri_boliviensis_boliviensis
ENSCSEG00000005952	tnpo3	96	85.164	ENSSHAG00000006837	TNPO3	100	85.164	Sarcophilus_harrisii
ENSCSEG00000005952	tnpo3	100	88.841	ENSSFOG00015001474	tnpo3	100	88.841	Scleropages_formosus
ENSCSEG00000005952	tnpo3	100	83.868	ENSSFOG00015004256	tnpo3	100	83.868	Scleropages_formosus
ENSCSEG00000005952	tnpo3	100	95.016	ENSSMAG00000010422	tnpo3	97	95.016	Scophthalmus_maximus
ENSCSEG00000005952	tnpo3	100	95.016	ENSSDUG00000004850	tnpo3	100	95.016	Seriola_dumerili
ENSCSEG00000005952	tnpo3	100	95.016	ENSSLDG00000016927	tnpo3	100	95.016	Seriola_lalandi_dorsalis
ENSCSEG00000005952	tnpo3	95	73.487	ENSSARG00000013893	TNPO3	98	73.487	Sorex_araneus
ENSCSEG00000005952	tnpo3	99	79.501	ENSSPUG00000007457	TNPO3	99	79.568	Sphenodon_punctatus
ENSCSEG00000005952	tnpo3	99	91.244	ENSSPAG00000014209	tnpo3	99	94.766	Stegastes_partitus
ENSCSEG00000005952	tnpo3	100	84.832	ENSSSCG00000016572	TNPO3	100	84.947	Sus_scrofa
ENSCSEG00000005952	tnpo3	69	82.237	ENSTRUG00000025251	tnpo3	100	84.880	Takifugu_rubripes
ENSCSEG00000005952	tnpo3	100	92.657	ENSTNIG00000003347	tnpo3	100	92.657	Tetraodon_nigroviridis
ENSCSEG00000005952	tnpo3	99	74.194	ENSTBEG00000007220	TNPO3	90	83.819	Tupaia_belangeri
ENSCSEG00000005952	tnpo3	99	72.899	ENSTTRG00000014618	TNPO3	98	72.899	Tursiops_truncatus
ENSCSEG00000005952	tnpo3	100	84.940	ENSUAMG00000021281	TNPO3	100	84.940	Ursus_americanus
ENSCSEG00000005952	tnpo3	100	84.940	ENSUMAG00000006882	TNPO3	100	84.940	Ursus_maritimus
ENSCSEG00000005952	tnpo3	85	72.261	ENSVPAG00000006166	TNPO3	88	72.261	Vicugna_pacos
ENSCSEG00000005952	tnpo3	100	84.940	ENSVVUG00000011004	TNPO3	100	84.668	Vulpes_vulpes
ENSCSEG00000005952	tnpo3	100	76.350	ENSXETG00000015009	tnpo3	100	76.350	Xenopus_tropicalis
ENSCSEG00000005952	tnpo3	69	86.093	ENSXCOG00000011552	tnpo3	100	90.378	Xiphophorus_couchianus
ENSCSEG00000005952	tnpo3	100	91.658	ENSXMAG00000013062	tnpo3	100	91.658	Xiphophorus_maculatus