EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000006039 (Gene tree)
Gene ID: 103389588
Gene Symbol: ddx4
Alias: vas-l|vas-m|vas-s|vasa
Full Name: DEAD-box helicase 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6021 bases
Position: chr14:11352689-11358709
Accession: 103389588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009586	DEAD	PF00270.29	6.2e-41	1	1
ENSCSEP00000009577	DEAD	PF00270.29	6.2e-41	1	1
ENSCSEP00000009610	DEAD	PF00270.29	3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009722	-	1848	-	ENSCSEP00000009610	615 (aa)	-	-
ENSCSET00000009698	-	2028	-	ENSCSEP00000009586	675 (aa)	-	-
ENSCSET00000009690	-	2040	-	ENSCSEP00000009577	679 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000006039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000006039	ddx4	55	32.987	ENSCSEG00000016139	ddx49	77	32.987
ENSCSEG00000006039	ddx4	58	37.811	ENSCSEG00000007987	DDX5	63	37.408
ENSCSEG00000006039	ddx4	81	41.600	ENSCSEG00000000900	-	65	48.584
ENSCSEG00000006039	ddx4	58	30.807	ENSCSEG00000010008	ddx52	59	30.882
ENSCSEG00000006039	ddx4	55	30.871	ENSCSEG00000007687	ddx47	83	30.871
ENSCSEG00000006039	ddx4	55	37.760	ENSCSEG00000013051	DDX41	62	37.760
ENSCSEG00000006039	ddx4	66	48.922	ENSCSEG00000003352	-	60	49.561
ENSCSEG00000006039	ddx4	58	38.308	ENSCSEG00000014167	ddx5	64	38.060
ENSCSEG00000006039	ddx4	54	32.353	ENSCSEG00000015765	ddx59	58	32.353
ENSCSEG00000006039	ddx4	52	30.663	ENSCSEG00000006875	ddx6	71	30.663
ENSCSEG00000006039	ddx4	56	31.783	ENSCSEG00000021058	eif4a3	92	31.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006039	ddx4	87	53.796	ENSG00000152670	DDX4	80	63.696	Homo_sapiens
ENSCSEG00000006039	ddx4	59	67.250	ENSAPOG00000021394	ddx4	97	68.217	Acanthochromis_polyacanthus
ENSCSEG00000006039	ddx4	76	60.078	ENSAMEG00000013960	DDX4	66	62.552	Ailuropoda_melanoleuca
ENSCSEG00000006039	ddx4	59	73.250	ENSACIG00000017623	ddx4	97	74.677	Amphilophus_citrinellus
ENSCSEG00000006039	ddx4	59	72.705	ENSAPEG00000008490	ddx4	96	74.479	Amphiprion_percula
ENSCSEG00000006039	ddx4	59	73.750	ENSATEG00000011704	ddx4	97	75.194	Anabas_testudineus
ENSCSEG00000006039	ddx4	64	62.989	ENSAPLG00000011662	DDX4	98	62.989	Anas_platyrhynchos
ENSCSEG00000006039	ddx4	86	53.344	ENSACAG00000014951	DDX4	64	63.535	Anolis_carolinensis
ENSCSEG00000006039	ddx4	77	58.679	ENSANAG00000029060	DDX4	68	62.955	Aotus_nancymaae
ENSCSEG00000006039	ddx4	100	59.590	ENSACLG00000007422	ddx4	86	74.922	Astatotilapia_calliptera
ENSCSEG00000006039	ddx4	72	68.293	ENSAMXG00000010288	ddx4	84	71.383	Astyanax_mexicanus
ENSCSEG00000006039	ddx4	76	60.271	ENSBTAG00000008871	DDX4	71	62.762	Bos_taurus
ENSCSEG00000006039	ddx4	77	37.500	WBGene00001598	glh-1	60	39.400	Caenorhabditis_elegans
ENSCSEG00000006039	ddx4	66	38.593	WBGene00001600	glh-3	63	38.681	Caenorhabditis_elegans
ENSCSEG00000006039	ddx4	93	51.565	ENSCJAG00000001951	DDX4	81	63.383	Callithrix_jacchus
ENSCSEG00000006039	ddx4	75	59.533	ENSCAFG00000006875	DDX4	66	61.925	Canis_familiaris
ENSCSEG00000006039	ddx4	95	50.368	ENSCAFG00020024295	DDX4	73	61.925	Canis_lupus_dingo
ENSCSEG00000006039	ddx4	76	60.465	ENSCHIG00000015567	DDX4	67	62.971	Capra_hircus
ENSCSEG00000006039	ddx4	99	46.275	ENSTSYG00000011848	DDX4	82	64.240	Carlito_syrichta
ENSCSEG00000006039	ddx4	77	47.619	ENSCPOG00000004327	DDX4	68	48.954	Cavia_porcellus
ENSCSEG00000006039	ddx4	76	59.496	ENSCCAG00000028725	DDX4	69	62.924	Cebus_capucinus
ENSCSEG00000006039	ddx4	87	53.984	ENSCATG00000044303	DDX4	80	63.696	Cercocebus_atys
ENSCSEG00000006039	ddx4	76	58.925	ENSCLAG00000005386	DDX4	68	62.236	Chinchilla_lanigera
ENSCSEG00000006039	ddx4	77	58.614	ENSCSAG00000016336	DDX4	63	63.305	Chlorocebus_sabaeus
ENSCSEG00000006039	ddx4	76	52.519	ENSCHOG00000000200	DDX4	65	55.180	Choloepus_hoffmanni
ENSCSEG00000006039	ddx4	73	60.707	ENSCPBG00000026547	DDX4	77	63.436	Chrysemys_picta_bellii
ENSCSEG00000006039	ddx4	79	52.212	ENSCING00000001412	-	78	57.849	Ciona_intestinalis
ENSCSEG00000006039	ddx4	73	53.668	ENSCSAVG00000004304	-	73	58.710	Ciona_savignyi
ENSCSEG00000006039	ddx4	77	53.430	ENSCANG00000003129	DDX4	78	57.391	Colobus_angolensis_palliatus
ENSCSEG00000006039	ddx4	81	57.527	ENSCGRG00001014961	Ddx4	63	65.446	Cricetulus_griseus_chok1gshd
ENSCSEG00000006039	ddx4	81	57.527	ENSCGRG00000001251	Ddx4	63	65.446	Cricetulus_griseus_crigri
ENSCSEG00000006039	ddx4	73	67.066	ENSDARG00000014373	ddx4	84	70.764	Danio_rerio
ENSCSEG00000006039	ddx4	72	61.066	ENSDNOG00000011658	DDX4	67	62.931	Dasypus_novemcinctus
ENSCSEG00000006039	ddx4	76	59.846	ENSDORG00000012201	Ddx4	68	62.112	Dipodomys_ordii
ENSCSEG00000006039	ddx4	71	48.247	FBgn0283442	vas	63	51.765	Drosophila_melanogaster
ENSCSEG00000006039	ddx4	59	51.449	ENSEBUG00000003290	-	82	51.449	Eptatretus_burgeri
ENSCSEG00000006039	ddx4	86	55.872	ENSEASG00005012143	DDX4	73	63.871	Equus_asinus_asinus
ENSCSEG00000006039	ddx4	87	55.351	ENSECAG00000023616	DDX4	74	63.270	Equus_caballus
ENSCSEG00000006039	ddx4	55	64.456	ENSEEUG00000012462	DDX4	52	64.456	Erinaceus_europaeus
ENSCSEG00000006039	ddx4	72	69.388	ENSELUG00000017328	ddx4	74	70.355	Esox_lucius
ENSCSEG00000006039	ddx4	81	57.092	ENSFCAG00000012560	DDX4	82	64.026	Felis_catus
ENSCSEG00000006039	ddx4	66	60.134	ENSFALG00000010910	DDX4	59	61.379	Ficedula_albicollis
ENSCSEG00000006039	ddx4	84	56.454	ENSFDAG00000003703	DDX4	70	61.191	Fukomys_damarensis
ENSCSEG00000006039	ddx4	70	71.518	ENSFHEG00000019935	ddx4	83	77.667	Fundulus_heteroclitus
ENSCSEG00000006039	ddx4	67	57.451	ENSGALG00000014713	DDX4	67	58.837	Gallus_gallus
ENSCSEG00000006039	ddx4	70	72.594	ENSGAFG00000016509	ddx4	98	61.621	Gambusia_affinis
ENSCSEG00000006039	ddx4	72	71.837	ENSGACG00000015323	ddx4	98	73.013	Gasterosteus_aculeatus
ENSCSEG00000006039	ddx4	87	54.120	ENSGGOG00000002439	DDX4	80	63.913	Gorilla_gorilla
ENSCSEG00000006039	ddx4	72	71.837	ENSHBUG00000001897	ddx4	86	75.549	Haplochromis_burtoni
ENSCSEG00000006039	ddx4	76	53.876	ENSHGLG00000003594	DDX4	67	56.042	Heterocephalus_glaber_female
ENSCSEG00000006039	ddx4	86	62.309	ENSHCOG00000018337	ddx4	82	69.342	Hippocampus_comes
ENSCSEG00000006039	ddx4	75	65.564	ENSIPUG00000001845	ddx4	80	67.623	Ictalurus_punctatus
ENSCSEG00000006039	ddx4	76	59.690	ENSSTOG00000021044	DDX4	68	62.134	Ictidomys_tridecemlineatus
ENSCSEG00000006039	ddx4	76	59.381	ENSJJAG00000015867	Ddx4	66	63.383	Jaculus_jaculus
ENSCSEG00000006039	ddx4	75	71.373	ENSKMAG00000012439	ddx4	98	61.280	Kryptolebias_marmoratus
ENSCSEG00000006039	ddx4	74	70.611	ENSLBEG00000019504	ddx4	99	62.805	Labrus_bergylta
ENSCSEG00000006039	ddx4	72	66.531	ENSLOCG00000010887	ddx4	92	70.814	Lepisosteus_oculatus
ENSCSEG00000006039	ddx4	75	59.884	ENSLAFG00000005900	DDX4	67	63.002	Loxodonta_africana
ENSCSEG00000006039	ddx4	87	53.984	ENSMFAG00000040186	DDX4	80	63.696	Macaca_fascicularis
ENSCSEG00000006039	ddx4	87	53.984	ENSMMUG00000017386	DDX4	80	63.696	Macaca_mulatta
ENSCSEG00000006039	ddx4	87	53.984	ENSMNEG00000033343	DDX4	80	63.696	Macaca_nemestrina
ENSCSEG00000006039	ddx4	84	50.000	ENSMLEG00000038233	DDX4	82	58.515	Mandrillus_leucophaeus
ENSCSEG00000006039	ddx4	59	72.250	ENSMAMG00000003574	ddx4	96	73.958	Mastacembelus_armatus
ENSCSEG00000006039	ddx4	72	71.429	ENSMZEG00005019116	ddx4	86	74.922	Maylandia_zebra
ENSCSEG00000006039	ddx4	72	55.172	ENSMAUG00000019873	Ddx4	63	58.581	Mesocricetus_auratus
ENSCSEG00000006039	ddx4	85	55.026	ENSMICG00000008994	-	78	64.509	Microcebus_murinus
ENSCSEG00000006039	ddx4	76	47.860	ENSMICG00000028132	-	66	51.685	Microcebus_murinus
ENSCSEG00000006039	ddx4	77	58.537	ENSMOCG00000013250	Ddx4	62	65.446	Microtus_ochrogaster
ENSCSEG00000006039	ddx4	72	69.838	ENSMMOG00000004689	ddx4	79	74.434	Mola_mola
ENSCSEG00000006039	ddx4	76	58.574	ENSMODG00000019511	DDX4	63	62.996	Monodelphis_domestica
ENSCSEG00000006039	ddx4	81	57.092	MGP_CAROLIEiJ_G0018893	Ddx4	62	65.904	Mus_caroli
ENSCSEG00000006039	ddx4	81	57.118	ENSMUSG00000021758	Ddx4	62	66.362	Mus_musculus
ENSCSEG00000006039	ddx4	81	57.527	MGP_PahariEiJ_G0015964	Ddx4	64	64.602	Mus_pahari
ENSCSEG00000006039	ddx4	81	57.092	MGP_SPRETEiJ_G0019772	Ddx4	62	66.133	Mus_spretus
ENSCSEG00000006039	ddx4	76	59.768	ENSMPUG00000007596	DDX4	62	63.797	Mustela_putorius_furo
ENSCSEG00000006039	ddx4	72	60.976	ENSMLUG00000001189	DDX4	63	63.974	Myotis_lucifugus
ENSCSEG00000006039	ddx4	87	53.628	ENSNGAG00000013259	Ddx4	64	64.334	Nannospalax_galili
ENSCSEG00000006039	ddx4	72	68.966	ENSNBRG00000014442	ddx4	97	67.263	Neolamprologus_brichardi
ENSCSEG00000006039	ddx4	98	50.295	ENSNLEG00000001662	DDX4	80	63.478	Nomascus_leucogenys
ENSCSEG00000006039	ddx4	50	56.000	ENSMEUG00000007757	DDX4	51	54.854	Notamacropus_eugenii
ENSCSEG00000006039	ddx4	96	46.154	ENSODEG00000016951	-	69	63.270	Octodon_degus
ENSCSEG00000006039	ddx4	96	46.142	ENSODEG00000003839	-	71	63.011	Octodon_degus
ENSCSEG00000006039	ddx4	70	72.708	ENSONIG00000012063	ddx4	98	73.673	Oreochromis_niloticus
ENSCSEG00000006039	ddx4	55	73.034	ENSONIG00000003749	-	59	73.563	Oreochromis_niloticus
ENSCSEG00000006039	ddx4	53	66.480	ENSOANG00000004888	-	91	66.480	Ornithorhynchus_anatinus
ENSCSEG00000006039	ddx4	76	59.496	ENSOCUG00000008597	DDX4	66	62.134	Oryctolagus_cuniculus
ENSCSEG00000006039	ddx4	81	64.247	ENSORLG00000020672	ddx4	80	68.800	Oryzias_latipes
ENSCSEG00000006039	ddx4	81	64.791	ENSORLG00020014206	ddx4	80	68.600	Oryzias_latipes_hni
ENSCSEG00000006039	ddx4	81	64.247	ENSORLG00015016600	ddx4	80	68.800	Oryzias_latipes_hsok
ENSCSEG00000006039	ddx4	70	70.440	ENSOMEG00000010651	ddx4	79	70.502	Oryzias_melastigma
ENSCSEG00000006039	ddx4	76	59.302	ENSOGAG00000007588	DDX4	65	62.712	Otolemur_garnettii
ENSCSEG00000006039	ddx4	76	60.465	ENSOARG00000007644	DDX4	65	62.971	Ovis_aries
ENSCSEG00000006039	ddx4	87	53.796	ENSPPAG00000033915	DDX4	80	63.696	Pan_paniscus
ENSCSEG00000006039	ddx4	76	59.574	ENSPPRG00000011417	DDX4	68	62.924	Panthera_pardus
ENSCSEG00000006039	ddx4	76	59.574	ENSPTIG00000007748	DDX4	80	60.600	Panthera_tigris_altaica
ENSCSEG00000006039	ddx4	87	53.796	ENSPTRG00000016884	DDX4	80	63.696	Pan_troglodytes
ENSCSEG00000006039	ddx4	87	53.984	ENSPANG00000010945	DDX4	80	63.696	Papio_anubis
ENSCSEG00000006039	ddx4	77	57.707	ENSPSIG00000017179	DDX4	73	62.444	Pelodiscus_sinensis
ENSCSEG00000006039	ddx4	59	65.163	ENSPMGG00000015642	ddx4	95	65.879	Periophthalmus_magnuspinnatus
ENSCSEG00000006039	ddx4	81	57.603	ENSPEMG00000010086	Ddx4	62	65.904	Peromyscus_maniculatus_bairdii
ENSCSEG00000006039	ddx4	78	57.692	ENSPCIG00000024758	DDX4	72	62.025	Phascolarctos_cinereus
ENSCSEG00000006039	ddx4	94	62.384	ENSPFOG00000018842	ddx4	98	61.774	Poecilia_formosa
ENSCSEG00000006039	ddx4	94	62.539	ENSPLAG00000020726	ddx4	98	61.927	Poecilia_latipinna
ENSCSEG00000006039	ddx4	94	62.422	ENSPMEG00000002976	ddx4	98	61.774	Poecilia_mexicana
ENSCSEG00000006039	ddx4	94	62.422	ENSPREG00000017840	ddx4	98	62.500	Poecilia_reticulata
ENSCSEG00000006039	ddx4	77	58.601	ENSPPYG00000015472	DDX4	63	64.130	Pongo_abelii
ENSCSEG00000006039	ddx4	76	56.202	ENSPCAG00000002675	DDX4	57	66.584	Procavia_capensis
ENSCSEG00000006039	ddx4	75	59.533	ENSPVAG00000002448	DDX4	67	63.597	Pteropus_vampyrus
ENSCSEG00000006039	ddx4	72	71.633	ENSPNYG00000022212	ddx4	82	72.746	Pundamilia_nyererei
ENSCSEG00000006039	ddx4	62	72.300	ENSPNAG00000003686	ddx4	70	70.615	Pygocentrus_nattereri
ENSCSEG00000006039	ddx4	73	60.516	ENSRNOG00000026686	Ddx4	62	65.675	Rattus_norvegicus
ENSCSEG00000006039	ddx4	87	54.309	ENSRBIG00000028795	DDX4	80	63.478	Rhinopithecus_bieti
ENSCSEG00000006039	ddx4	87	54.560	ENSRROG00000045392	DDX4	80	63.478	Rhinopithecus_roxellana
ENSCSEG00000006039	ddx4	72	45.759	YPL119C	DBP1	73	48.222	Saccharomyces_cerevisiae
ENSCSEG00000006039	ddx4	76	59.109	ENSSBOG00000035231	DDX4	69	62.500	Saimiri_boliviensis_boliviensis
ENSCSEG00000006039	ddx4	78	57.482	ENSSHAG00000009132	DDX4	64	63.216	Sarcophilus_harrisii
ENSCSEG00000006039	ddx4	73	65.545	ENSSFOG00015006531	ddx4	70	70.133	Scleropages_formosus
ENSCSEG00000006039	ddx4	73	63.400	ENSSMAG00000009800	ddx4	99	61.905	Scophthalmus_maximus
ENSCSEG00000006039	ddx4	75	71.540	ENSSDUG00000022015	ddx4	98	64.931	Seriola_dumerili
ENSCSEG00000006039	ddx4	59	74.250	ENSSLDG00000015312	ddx4	96	76.302	Seriola_lalandi_dorsalis
ENSCSEG00000006039	ddx4	63	60.698	ENSSARG00000004206	DDX4	55	63.819	Sorex_araneus
ENSCSEG00000006039	ddx4	68	62.876	ENSSPUG00000007260	DDX4	80	63.090	Sphenodon_punctatus
ENSCSEG00000006039	ddx4	59	73.000	ENSSPAG00000014307	ddx4	97	73.902	Stegastes_partitus
ENSCSEG00000006039	ddx4	76	60.078	ENSSSCG00000016913	DDX4	66	62.552	Sus_scrofa
ENSCSEG00000006039	ddx4	64	59.954	ENSTGUG00000002548	DDX4	99	59.954	Taeniopygia_guttata
ENSCSEG00000006039	ddx4	97	51.282	ENSTNIG00000014474	ddx4	84	62.134	Tetraodon_nigroviridis
ENSCSEG00000006039	ddx4	76	58.721	ENSTTRG00000009316	DDX4	63	63.797	Tursiops_truncatus
ENSCSEG00000006039	ddx4	76	60.078	ENSUAMG00000023028	DDX4	72	63.002	Ursus_americanus
ENSCSEG00000006039	ddx4	76	60.078	ENSUMAG00000009291	DDX4	72	63.002	Ursus_maritimus
ENSCSEG00000006039	ddx4	73	60.563	ENSVPAG00000009491	DDX4	65	63.383	Vicugna_pacos
ENSCSEG00000006039	ddx4	75	59.728	ENSVVUG00000021369	DDX4	69	62.134	Vulpes_vulpes
ENSCSEG00000006039	ddx4	87	48.507	ENSXETG00000030832	DDX4	71	60.045	Xenopus_tropicalis
ENSCSEG00000006039	ddx4	68	74.464	ENSXMAG00000009677	ddx4	98	61.927	Xiphophorus_maculatus