EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006041 (Gene tree)
Gene ID: 103377916
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7593 bases
Position: chr4:7700774-7708366
Accession: 103377916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009419	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009523	-	3400	XM_008308903	ENSCSEP00000009411	760 (aa)	XP_008307125	UPI0004967ED9
ENSCSET00000009531	-	1914	-	ENSCSEP00000009419	637 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000006041's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03022	Basal transcription factors	KEGG
csem03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006041	ercc2	99	81.731	ENSG00000104884	ERCC2	97	79.970	Homo_sapiens
ENSCSEG00000006041	ercc2	99	91.717	ENSAPOG00000000375	ercc2	100	91.717	Acanthochromis_polyacanthus
ENSCSEG00000006041	ercc2	100	91.579	ENSACIG00000008002	ercc2	98	91.579	Amphilophus_citrinellus
ENSCSEG00000006041	ercc2	100	89.655	ENSAOCG00000016153	ercc2	100	89.655	Amphiprion_ocellaris
ENSCSEG00000006041	ercc2	100	89.805	ENSAPEG00000016712	ercc2	100	89.805	Amphiprion_percula
ENSCSEG00000006041	ercc2	100	92.632	ENSATEG00000005268	ercc2	98	92.632	Anabas_testudineus
ENSCSEG00000006041	ercc2	99	79.518	ENSANAG00000022694	ERCC2	97	79.518	Aotus_nancymaae
ENSCSEG00000006041	ercc2	99	92.018	ENSACLG00000017573	ercc2	100	92.018	Astatotilapia_calliptera
ENSCSEG00000006041	ercc2	99	89.910	ENSAMXG00000009052	ercc2	99	89.910	Astyanax_mexicanus
ENSCSEG00000006041	ercc2	99	79.819	ENSCJAG00000012716	ERCC2	97	79.819	Callithrix_jacchus
ENSCSEG00000006041	ercc2	99	80.422	ENSCAFG00020011390	ERCC2	98	80.422	Canis_lupus_dingo
ENSCSEG00000006041	ercc2	99	66.923	ENSTSYG00000026723	ERCC2	98	66.923	Carlito_syrichta
ENSCSEG00000006041	ercc2	99	77.728	ENSCCAG00000019831	ERCC2	97	77.728	Cebus_capucinus
ENSCSEG00000006041	ercc2	99	79.819	ENSCANG00000040683	ERCC2	97	79.819	Colobus_angolensis_palliatus
ENSCSEG00000006041	ercc2	99	77.711	ENSEASG00005013856	ERCC2	97	77.711	Equus_asinus_asinus
ENSCSEG00000006041	ercc2	99	88.855	ENSELUG00000018055	ercc2	99	88.855	Esox_lucius
ENSCSEG00000006041	ercc2	99	80.422	ENSFCAG00000002679	ERCC2	97	80.422	Felis_catus
ENSCSEG00000006041	ercc2	100	91.128	ENSFHEG00000000072	ercc2	98	91.128	Fundulus_heteroclitus
ENSCSEG00000006041	ercc2	99	80.512	ENSGAGG00000009493	ERCC2	98	80.512	Gopherus_agassizii
ENSCSEG00000006041	ercc2	99	79.819	ENSGGOG00000015842	ERCC2	97	79.819	Gorilla_gorilla
ENSCSEG00000006041	ercc2	100	91.467	ENSHBUG00000002187	ercc2	100	91.467	Haplochromis_burtoni
ENSCSEG00000006041	ercc2	100	90.677	ENSLBEG00000010573	ercc2	90	90.677	Labrus_bergylta
ENSCSEG00000006041	ercc2	99	79.819	ENSMFAG00000037898	ERCC2	97	79.819	Macaca_fascicularis
ENSCSEG00000006041	ercc2	99	79.819	ENSMMUG00000014419	ERCC2	97	79.819	Macaca_mulatta
ENSCSEG00000006041	ercc2	99	79.819	ENSMNEG00000042641	ERCC2	97	79.819	Macaca_nemestrina
ENSCSEG00000006041	ercc2	99	79.789	ENSMLEG00000043492	ERCC2	97	79.789	Mandrillus_leucophaeus
ENSCSEG00000006041	ercc2	100	91.880	ENSMAMG00000016724	ercc2	98	91.880	Mastacembelus_armatus
ENSCSEG00000006041	ercc2	100	92.030	ENSMZEG00005024441	ercc2	100	92.030	Maylandia_zebra
ENSCSEG00000006041	ercc2	99	79.669	ENSMICG00000000635	ERCC2	97	79.669	Microcebus_murinus
ENSCSEG00000006041	ercc2	100	88.102	ENSMMOG00000005162	ercc2	98	88.102	Mola_mola
ENSCSEG00000006041	ercc2	100	90.677	ENSMALG00000005990	ercc2	98	90.677	Monopterus_albus
ENSCSEG00000006041	ercc2	99	80.422	MGP_CAROLIEiJ_G0029287	Ercc2	97	80.422	Mus_caroli
ENSCSEG00000006041	ercc2	99	80.422	ENSMUSG00000030400	Ercc2	97	80.422	Mus_musculus
ENSCSEG00000006041	ercc2	99	80.422	MGP_PahariEiJ_G0021147	Ercc2	97	80.422	Mus_pahari
ENSCSEG00000006041	ercc2	99	80.271	MGP_SPRETEiJ_G0030371	Ercc2	97	80.271	Mus_spretus
ENSCSEG00000006041	ercc2	99	79.819	ENSPPAG00000044005	ERCC2	97	79.819	Pan_paniscus
ENSCSEG00000006041	ercc2	99	76.205	ENSPPRG00000000507	ERCC2	97	76.355	Panthera_pardus
ENSCSEG00000006041	ercc2	99	79.819	ENSPTRG00000011149	ERCC2	97	79.819	Pan_troglodytes
ENSCSEG00000006041	ercc2	99	79.789	ENSPANG00000032195	ERCC2	97	79.789	Papio_anubis
ENSCSEG00000006041	ercc2	99	85.090	ENSPKIG00000006883	ercc2	96	85.090	Paramormyrops_kingsleyae
ENSCSEG00000006041	ercc2	99	89.608	ENSPMGG00000000223	ercc2	99	89.608	Periophthalmus_magnuspinnatus
ENSCSEG00000006041	ercc2	100	90.977	ENSPLAG00000002626	ercc2	98	90.977	Poecilia_latipinna
ENSCSEG00000006041	ercc2	100	90.977	ENSPMEG00000002858	ercc2	98	90.977	Poecilia_mexicana
ENSCSEG00000006041	ercc2	100	86.165	ENSPREG00000019280	ercc2	97	86.165	Poecilia_reticulata
ENSCSEG00000006041	ercc2	99	91.604	ENSPNYG00000022007	ercc2	100	91.604	Pundamilia_nyererei
ENSCSEG00000006041	ercc2	99	88.705	ENSPNAG00000010434	ercc2	99	88.705	Pygocentrus_nattereri
ENSCSEG00000006041	ercc2	99	79.819	ENSRROG00000040423	ERCC2	97	79.819	Rhinopithecus_roxellana
ENSCSEG00000006041	ercc2	99	79.669	ENSSBOG00000030257	ERCC2	98	79.669	Saimiri_boliviensis_boliviensis
ENSCSEG00000006041	ercc2	99	85.522	ENSSMAG00000019720	ercc2	100	85.522	Scophthalmus_maximus
ENSCSEG00000006041	ercc2	100	91.729	ENSSDUG00000002397	ercc2	100	91.729	Seriola_dumerili
ENSCSEG00000006041	ercc2	100	91.579	ENSSLDG00000020353	ercc2	100	91.579	Seriola_lalandi_dorsalis
ENSCSEG00000006041	ercc2	100	92.180	ENSSPAG00000002074	ercc2	98	92.180	Stegastes_partitus
ENSCSEG00000006041	ercc2	100	91.128	ENSTRUG00000007303	ercc2	98	91.128	Takifugu_rubripes
ENSCSEG00000006041	ercc2	99	80.422	ENSUAMG00000019562	ERCC2	98	80.422	Ursus_americanus
ENSCSEG00000006041	ercc2	100	86.316	ENSXMAG00000003922	ercc2	97	86.316	Xiphophorus_maculatus