EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000006115 (Gene tree)
Gene ID: 103385032
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 44545 bases
Position: chr10:11423454-11467998
Accession: 103385032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009524	ResIII	PF04851.15	7e-08	1	1
ENSCSEP00000009530	ResIII	PF04851.15	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009636	-	4302	XM_017036130	ENSCSEP00000009524	1303 (aa)	-	-
ENSCSET00000009642	-	4507	-	ENSCSEP00000009530	1303 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000006115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000006115	-	95	59.767	ENSCSEG00000001740	rad54l2	84	59.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006115	-	93	61.364	ENSG00000164080	RAD54L2	85	64.387	Homo_sapiens
ENSCSEG00000006115	-	98	80.856	ENSAPOG00000024141	-	87	81.001	Acanthochromis_polyacanthus
ENSCSEG00000006115	-	93	61.321	ENSAMEG00000009326	RAD54L2	82	62.258	Ailuropoda_melanoleuca
ENSCSEG00000006115	-	91	77.322	ENSACIG00000015932	-	85	77.322	Amphilophus_citrinellus
ENSCSEG00000006115	-	98	61.890	ENSACIG00000018079	rad54l2	87	62.869	Amphilophus_citrinellus
ENSCSEG00000006115	-	98	80.389	ENSAOCG00000022380	-	86	80.595	Amphiprion_ocellaris
ENSCSEG00000006115	-	95	63.629	ENSATEG00000009346	rad54l2	87	63.388	Anabas_testudineus
ENSCSEG00000006115	-	100	80.970	ENSATEG00000006641	-	87	80.970	Anabas_testudineus
ENSCSEG00000006115	-	92	65.463	ENSAPLG00000002121	RAD54L2	84	66.038	Anas_platyrhynchos
ENSCSEG00000006115	-	84	70.081	ENSACAG00000015883	RAD54L2	90	66.066	Anolis_carolinensis
ENSCSEG00000006115	-	93	61.283	ENSANAG00000025396	RAD54L2	82	62.307	Aotus_nancymaae
ENSCSEG00000006115	-	87	65.985	ENSACLG00000019111	rad54l2	86	64.339	Astatotilapia_calliptera
ENSCSEG00000006115	-	100	79.179	ENSACLG00000018296	-	87	79.559	Astatotilapia_calliptera
ENSCSEG00000006115	-	91	64.652	ENSAMXG00000013807	rad54l2	81	64.667	Astyanax_mexicanus
ENSCSEG00000006115	-	93	61.115	ENSBTAG00000032253	RAD54L2	83	62.127	Bos_taurus
ENSCSEG00000006115	-	55	47.086	WBGene00007761	rad-26	57	47.307	Caenorhabditis_elegans
ENSCSEG00000006115	-	93	61.441	ENSCJAG00000005575	RAD54L2	87	62.470	Callithrix_jacchus
ENSCSEG00000006115	-	93	61.164	ENSCAFG00000010120	RAD54L2	82	62.097	Canis_familiaris
ENSCSEG00000006115	-	93	61.164	ENSCAFG00020022320	RAD54L2	82	62.097	Canis_lupus_dingo
ENSCSEG00000006115	-	93	61.369	ENSCHIG00000008830	RAD54L2	82	62.389	Capra_hircus
ENSCSEG00000006115	-	93	61.006	ENSTSYG00000013200	RAD54L2	82	61.817	Carlito_syrichta
ENSCSEG00000006115	-	79	66.908	ENSCAPG00000016465	RAD54L2	77	61.665	Cavia_aperea
ENSCSEG00000006115	-	93	61.085	ENSCPOG00000005941	RAD54L2	82	62.258	Cavia_porcellus
ENSCSEG00000006115	-	78	62.548	ENSCCAG00000024465	RAD54L2	79	62.548	Cebus_capucinus
ENSCSEG00000006115	-	93	61.273	ENSCATG00000039891	RAD54L2	83	62.480	Cercocebus_atys
ENSCSEG00000006115	-	93	61.006	ENSCLAG00000008059	RAD54L2	82	62.016	Chinchilla_lanigera
ENSCSEG00000006115	-	93	61.237	ENSCSAG00000014027	RAD54L2	82	62.440	Chlorocebus_sabaeus
ENSCSEG00000006115	-	92	66.211	ENSCPBG00000016624	RAD54L2	84	66.532	Chrysemys_picta_bellii
ENSCSEG00000006115	-	78	50.718	ENSCING00000009208	-	95	50.611	Ciona_intestinalis
ENSCSEG00000006115	-	93	61.237	ENSCANG00000036093	RAD54L2	83	62.440	Colobus_angolensis_palliatus
ENSCSEG00000006115	-	93	61.265	ENSCGRG00000007921	Rad54l2	82	62.237	Cricetulus_griseus_crigri
ENSCSEG00000006115	-	98	75.426	ENSCVAG00000005376	-	87	75.604	Cyprinodon_variegatus
ENSCSEG00000006115	-	92	63.322	ENSCVAG00000017887	rad54l2	79	63.210	Cyprinodon_variegatus
ENSCSEG00000006115	-	94	65.210	ENSDARG00000063031	rad54l2	87	64.331	Danio_rerio
ENSCSEG00000006115	-	93	61.207	ENSDNOG00000017359	RAD54L2	84	61.928	Dasypus_novemcinctus
ENSCSEG00000006115	-	85	67.225	ENSDORG00000000651	Rad54l2	79	69.030	Dipodomys_ordii
ENSCSEG00000006115	-	65	58.019	FBgn0034976	CG4049	64	52.036	Drosophila_melanogaster
ENSCSEG00000006115	-	91	60.688	ENSETEG00000013290	RAD54L2	88	60.688	Echinops_telfairi
ENSCSEG00000006115	-	79	57.817	ENSEBUG00000001591	rad54l2	74	60.615	Eptatretus_burgeri
ENSCSEG00000006115	-	93	61.351	ENSEASG00005012868	RAD54L2	82	62.288	Equus_asinus_asinus
ENSCSEG00000006115	-	93	61.194	ENSECAG00000014759	RAD54L2	82	62.288	Equus_caballus
ENSCSEG00000006115	-	78	66.476	ENSEEUG00000001759	RAD54L2	74	66.476	Erinaceus_europaeus
ENSCSEG00000006115	-	98	68.006	ENSELUG00000011246	RAD54L2	88	67.445	Esox_lucius
ENSCSEG00000006115	-	93	61.321	ENSFCAG00000018563	RAD54L2	82	62.177	Felis_catus
ENSCSEG00000006115	-	91	66.013	ENSFALG00000008938	RAD54L2	91	66.150	Ficedula_albicollis
ENSCSEG00000006115	-	93	61.006	ENSFDAG00000017084	RAD54L2	82	62.016	Fukomys_damarensis
ENSCSEG00000006115	-	92	62.859	ENSFHEG00000023241	rad54l2	81	62.284	Fundulus_heteroclitus
ENSCSEG00000006115	-	100	74.981	ENSFHEG00000017845	-	86	75.800	Fundulus_heteroclitus
ENSCSEG00000006115	-	79	72.131	ENSGMOG00000010674	rad54l2	89	65.926	Gadus_morhua
ENSCSEG00000006115	-	92	65.316	ENSGALG00000003243	RAD54L2	82	65.696	Gallus_gallus
ENSCSEG00000006115	-	100	73.596	ENSGAFG00000002396	-	87	75.254	Gambusia_affinis
ENSCSEG00000006115	-	91	63.644	ENSGAFG00000021535	rad54l2	83	62.945	Gambusia_affinis
ENSCSEG00000006115	-	96	76.535	ENSGACG00000005642	-	98	76.535	Gasterosteus_aculeatus
ENSCSEG00000006115	-	91	63.704	ENSGACG00000001558	rad54l2	86	63.659	Gasterosteus_aculeatus
ENSCSEG00000006115	-	92	65.487	ENSGAGG00000020971	RAD54L2	81	70.477	Gopherus_agassizii
ENSCSEG00000006115	-	93	61.364	ENSGGOG00000010032	RAD54L2	83	62.570	Gorilla_gorilla
ENSCSEG00000006115	-	95	62.295	ENSHBUG00000012480	rad54l2	85	64.583	Haplochromis_burtoni
ENSCSEG00000006115	-	100	79.179	ENSHBUG00000018930	-	87	79.559	Haplochromis_burtoni
ENSCSEG00000006115	-	93	61.242	ENSHGLG00000012116	RAD54L2	82	62.258	Heterocephalus_glaber_female
ENSCSEG00000006115	-	93	61.242	ENSHGLG00100007205	RAD54L2	82	62.258	Heterocephalus_glaber_male
ENSCSEG00000006115	-	97	59.892	ENSHCOG00000007601	rad54l2	83	60.092	Hippocampus_comes
ENSCSEG00000006115	-	99	72.789	ENSHCOG00000006741	-	87	73.484	Hippocampus_comes
ENSCSEG00000006115	-	92	64.069	ENSIPUG00000024973	-	86	64.115	Ictalurus_punctatus
ENSCSEG00000006115	-	91	63.250	ENSIPUG00000019664	rad54l2	80	63.201	Ictalurus_punctatus
ENSCSEG00000006115	-	93	61.242	ENSSTOG00000010014	RAD54L2	82	62.258	Ictidomys_tridecemlineatus
ENSCSEG00000006115	-	93	61.098	ENSJJAG00000014332	Rad54l2	82	62.058	Jaculus_jaculus
ENSCSEG00000006115	-	98	77.882	ENSKMAG00000002931	-	86	78.013	Kryptolebias_marmoratus
ENSCSEG00000006115	-	95	61.719	ENSKMAG00000001976	rad54l2	85	63.553	Kryptolebias_marmoratus
ENSCSEG00000006115	-	83	79.102	ENSLBEG00000008534	-	84	79.102	Labrus_bergylta
ENSCSEG00000006115	-	90	63.842	ENSLBEG00000018779	rad54l2	85	62.822	Labrus_bergylta
ENSCSEG00000006115	-	93	59.889	ENSLACG00000016004	RAD54L2	84	60.512	Latimeria_chalumnae
ENSCSEG00000006115	-	81	71.922	ENSLOCG00000014222	rad54l2	99	71.136	Lepisosteus_oculatus
ENSCSEG00000006115	-	93	60.955	ENSLAFG00000005966	RAD54L2	82	61.958	Loxodonta_africana
ENSCSEG00000006115	-	93	61.237	ENSMFAG00000041836	RAD54L2	83	62.440	Macaca_fascicularis
ENSCSEG00000006115	-	93	61.285	ENSMMUG00000012002	RAD54L2	82	62.490	Macaca_mulatta
ENSCSEG00000006115	-	93	61.237	ENSMNEG00000035063	RAD54L2	84	62.440	Macaca_nemestrina
ENSCSEG00000006115	-	93	61.237	ENSMLEG00000034668	RAD54L2	83	62.440	Mandrillus_leucophaeus
ENSCSEG00000006115	-	97	61.959	ENSMAMG00000023761	rad54l2	84	61.941	Mastacembelus_armatus
ENSCSEG00000006115	-	99	79.176	ENSMAMG00000015321	-	88	78.730	Mastacembelus_armatus
ENSCSEG00000006115	-	95	62.187	ENSMZEG00005012584	rad54l2	85	62.981	Maylandia_zebra
ENSCSEG00000006115	-	98	79.611	ENSMZEG00005021308	-	86	80.203	Maylandia_zebra
ENSCSEG00000006115	-	92	65.344	ENSMGAG00000002911	RAD54L2	82	65.531	Meleagris_gallopavo
ENSCSEG00000006115	-	79	66.793	ENSMAUG00000011651	Rad54l2	91	68.133	Mesocricetus_auratus
ENSCSEG00000006115	-	93	61.212	ENSMICG00000002777	RAD54L2	84	62.147	Microcebus_murinus
ENSCSEG00000006115	-	93	61.667	ENSMOCG00000022448	Rad54l2	83	62.653	Microtus_ochrogaster
ENSCSEG00000006115	-	91	77.435	ENSMMOG00000016901	-	86	77.435	Mola_mola
ENSCSEG00000006115	-	91	64.030	ENSMMOG00000021709	rad54l2	83	64.030	Mola_mola
ENSCSEG00000006115	-	91	65.775	ENSMODG00000011850	RAD54L2	87	65.987	Monodelphis_domestica
ENSCSEG00000006115	-	86	82.212	ENSMALG00000015084	-	96	82.353	Monopterus_albus
ENSCSEG00000006115	-	93	61.447	MGP_CAROLIEiJ_G0032634	Rad54l2	82	62.429	Mus_caroli
ENSCSEG00000006115	-	93	61.606	ENSMUSG00000040661	Rad54l2	82	62.592	Mus_musculus
ENSCSEG00000006115	-	93	61.447	MGP_PahariEiJ_G0015502	Rad54l2	82	62.429	Mus_pahari
ENSCSEG00000006115	-	93	61.606	MGP_SPRETEiJ_G0033779	Rad54l2	82	62.592	Mus_spretus
ENSCSEG00000006115	-	93	61.242	ENSMPUG00000011865	RAD54L2	82	62.177	Mustela_putorius_furo
ENSCSEG00000006115	-	93	61.351	ENSMLUG00000004605	RAD54L2	82	62.288	Myotis_lucifugus
ENSCSEG00000006115	-	93	61.212	ENSNGAG00000015629	Rad54l2	82	62.177	Nannospalax_galili
ENSCSEG00000006115	-	83	67.993	ENSNBRG00000001937	rad54l2	80	67.742	Neolamprologus_brichardi
ENSCSEG00000006115	-	98	79.689	ENSNBRG00000022847	-	86	80.282	Neolamprologus_brichardi
ENSCSEG00000006115	-	93	61.364	ENSNLEG00000007038	RAD54L2	83	62.570	Nomascus_leucogenys
ENSCSEG00000006115	-	86	72.794	ENSMEUG00000009835	RAD54L2	83	72.794	Notamacropus_eugenii
ENSCSEG00000006115	-	92	61.966	ENSODEG00000018266	RAD54L2	82	62.097	Octodon_degus
ENSCSEG00000006115	-	98	79.455	ENSONIG00000001663	-	88	79.969	Oreochromis_niloticus
ENSCSEG00000006115	-	95	63.629	ENSONIG00000014468	rad54l2	86	62.177	Oreochromis_niloticus
ENSCSEG00000006115	-	92	65.703	ENSOANG00000012793	RAD54L2	84	65.971	Ornithorhynchus_anatinus
ENSCSEG00000006115	-	93	61.242	ENSOCUG00000017577	RAD54L2	82	62.258	Oryctolagus_cuniculus
ENSCSEG00000006115	-	100	74.943	ENSORLG00000002714	-	86	76.157	Oryzias_latipes
ENSCSEG00000006115	-	86	65.997	ENSORLG00000002276	rad54l2	79	64.508	Oryzias_latipes
ENSCSEG00000006115	-	100	74.714	ENSORLG00020019256	-	86	75.843	Oryzias_latipes_hni
ENSCSEG00000006115	-	94	62.380	ENSORLG00020003470	rad54l2	85	61.240	Oryzias_latipes_hni
ENSCSEG00000006115	-	100	75.019	ENSORLG00015013408	-	86	76.157	Oryzias_latipes_hsok
ENSCSEG00000006115	-	94	62.460	ENSORLG00015021530	rad54l2	82	63.353	Oryzias_latipes_hsok
ENSCSEG00000006115	-	100	74.924	ENSOMEG00000008216	-	88	75.922	Oryzias_melastigma
ENSCSEG00000006115	-	86	65.511	ENSOMEG00000005597	rad54l2	83	61.364	Oryzias_melastigma
ENSCSEG00000006115	-	75	63.752	ENSOGAG00000012442	RAD54L2	86	63.851	Otolemur_garnettii
ENSCSEG00000006115	-	93	61.369	ENSOARG00000007264	RAD54L2	82	62.389	Ovis_aries
ENSCSEG00000006115	-	93	61.364	ENSPPAG00000038472	RAD54L2	83	62.570	Pan_paniscus
ENSCSEG00000006115	-	93	61.321	ENSPPRG00000010212	RAD54L2	82	62.177	Panthera_pardus
ENSCSEG00000006115	-	93	61.164	ENSPTIG00000002240	RAD54L2	82	62.177	Panthera_tigris_altaica
ENSCSEG00000006115	-	93	61.364	ENSPTRG00000014974	RAD54L2	83	62.570	Pan_troglodytes
ENSCSEG00000006115	-	93	61.237	ENSPANG00000000857	RAD54L2	83	62.440	Papio_anubis
ENSCSEG00000006115	-	98	66.589	ENSPKIG00000001065	rad54l2	87	66.953	Paramormyrops_kingsleyae
ENSCSEG00000006115	-	77	70.490	ENSPSIG00000014346	RAD54L2	91	70.490	Pelodiscus_sinensis
ENSCSEG00000006115	-	93	72.218	ENSPMGG00000000641	-	88	71.565	Periophthalmus_magnuspinnatus
ENSCSEG00000006115	-	82	66.019	ENSPMGG00000002208	rad54l2	85	65.741	Periophthalmus_magnuspinnatus
ENSCSEG00000006115	-	93	61.399	ENSPEMG00000012051	Rad54l2	82	62.369	Peromyscus_maniculatus_bairdii
ENSCSEG00000006115	-	87	66.296	ENSPCIG00000018143	RAD54L2	86	66.523	Phascolarctos_cinereus
ENSCSEG00000006115	-	91	63.364	ENSPFOG00000018644	rad54l2	79	63.215	Poecilia_formosa
ENSCSEG00000006115	-	98	75.409	ENSPFOG00000000197	-	86	75.900	Poecilia_formosa
ENSCSEG00000006115	-	100	74.240	ENSPLAG00000013908	-	87	75.900	Poecilia_latipinna
ENSCSEG00000006115	-	91	63.447	ENSPLAG00000006015	rad54l2	79	63.297	Poecilia_latipinna
ENSCSEG00000006115	-	91	63.530	ENSPMEG00000021535	rad54l2	83	63.237	Poecilia_mexicana
ENSCSEG00000006115	-	100	74.012	ENSPMEG00000009878	-	87	75.606	Poecilia_mexicana
ENSCSEG00000006115	-	90	62.910	ENSPREG00000008628	rad54l2	86	62.867	Poecilia_reticulata
ENSCSEG00000006115	-	98	75.175	ENSPREG00000013377	RAD54L2	86	75.665	Poecilia_reticulata
ENSCSEG00000006115	-	93	61.364	ENSPPYG00000013831	RAD54L2	85	62.570	Pongo_abelii
ENSCSEG00000006115	-	81	59.690	ENSPCAG00000011952	RAD54L2	77	59.690	Procavia_capensis
ENSCSEG00000006115	-	93	61.020	ENSPCOG00000015983	RAD54L2	82	61.977	Propithecus_coquereli
ENSCSEG00000006115	-	98	79.689	ENSPNYG00000011435	-	86	80.282	Pundamilia_nyererei
ENSCSEG00000006115	-	83	68.440	ENSPNYG00000020693	rad54l2	80	68.440	Pundamilia_nyererei
ENSCSEG00000006115	-	92	69.155	ENSPNAG00000011583	-	88	67.029	Pygocentrus_nattereri
ENSCSEG00000006115	-	92	64.813	ENSPNAG00000006451	rad54l2	83	64.532	Pygocentrus_nattereri
ENSCSEG00000006115	-	82	63.855	ENSRNOG00000049489	LOC102552166	91	67.100	Rattus_norvegicus
ENSCSEG00000006115	-	98	57.154	ENSRNOG00000013570	Rad54l2	82	59.365	Rattus_norvegicus
ENSCSEG00000006115	-	93	61.472	ENSRBIG00000032434	RAD54L2	90	62.724	Rhinopithecus_bieti
ENSCSEG00000006115	-	93	61.472	ENSRROG00000042309	RAD54L2	84	62.693	Rhinopithecus_roxellana
ENSCSEG00000006115	-	92	62.338	ENSSBOG00000002139	RAD54L2	82	62.470	Saimiri_boliviensis_boliviensis
ENSCSEG00000006115	-	92	65.775	ENSSHAG00000008604	RAD54L2	84	65.775	Sarcophilus_harrisii
ENSCSEG00000006115	-	98	68.340	ENSSFOG00015019014	rad54l2	87	68.245	Scleropages_formosus
ENSCSEG00000006115	-	92	62.490	ENSSMAG00000020933	rad54l2	85	60.325	Scophthalmus_maximus
ENSCSEG00000006115	-	100	79.217	ENSSMAG00000009978	-	87	79.518	Scophthalmus_maximus
ENSCSEG00000006115	-	99	82.267	ENSSDUG00000016711	-	87	81.721	Seriola_dumerili
ENSCSEG00000006115	-	97	61.615	ENSSDUG00000014268	rad54l2	85	64.373	Seriola_dumerili
ENSCSEG00000006115	-	94	79.854	ENSSLDG00000023388	-	86	79.854	Seriola_lalandi_dorsalis
ENSCSEG00000006115	-	91	64.362	ENSSLDG00000023959	rad54l2	86	64.362	Seriola_lalandi_dorsalis
ENSCSEG00000006115	-	95	62.393	ENSSPAG00000016532	rad54l2	85	63.426	Stegastes_partitus
ENSCSEG00000006115	-	91	81.214	ENSSPAG00000006371	-	86	81.297	Stegastes_partitus
ENSCSEG00000006115	-	93	61.164	ENSSSCG00000011425	RAD54L2	82	62.097	Sus_scrofa
ENSCSEG00000006115	-	92	65.447	ENSTGUG00000004888	RAD54L2	82	66.016	Taeniopygia_guttata
ENSCSEG00000006115	-	98	75.272	ENSTRUG00000011066	-	87	75.469	Takifugu_rubripes
ENSCSEG00000006115	-	91	63.802	ENSTRUG00000013962	rad54l2	83	61.051	Takifugu_rubripes
ENSCSEG00000006115	-	85	76.523	ENSTNIG00000006049	-	99	76.434	Tetraodon_nigroviridis
ENSCSEG00000006115	-	83	66.970	ENSTNIG00000014694	rad54l2	94	67.029	Tetraodon_nigroviridis
ENSCSEG00000006115	-	86	62.257	ENSTBEG00000003377	RAD54L2	85	62.169	Tupaia_belangeri
ENSCSEG00000006115	-	93	61.798	ENSUAMG00000020891	RAD54L2	85	62.768	Ursus_americanus
ENSCSEG00000006115	-	93	61.024	ENSUMAG00000021678	RAD54L2	79	67.871	Ursus_maritimus
ENSCSEG00000006115	-	93	61.164	ENSVVUG00000026874	RAD54L2	85	62.097	Vulpes_vulpes
ENSCSEG00000006115	-	85	67.434	ENSXETG00000000070	rad54l2	80	67.800	Xenopus_tropicalis
ENSCSEG00000006115	-	94	71.997	ENSXCOG00000002848	-	87	72.646	Xiphophorus_couchianus
ENSCSEG00000006115	-	91	60.546	ENSXCOG00000004961	rad54l2	82	60.479	Xiphophorus_couchianus
ENSCSEG00000006115	-	91	63.145	ENSXMAG00000017182	rad54l2	87	63.145	Xiphophorus_maculatus
ENSCSEG00000006115	-	100	74.164	ENSXMAG00000019370	-	86	75.900	Xiphophorus_maculatus