EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006147 (Gene tree)
Gene ID: 103382632
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4375 bases
Position: chr8:18618113-18622487
Accession: 103382632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009584	RNA_pol_Rpb4	PF03874.16	3.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009696	-	3245	XM_008315483	ENSCSEP00000009584	144 (aa)	XP_008313705	UPI000495D877

Gene Model

Click here to download ENSCSEG00000006147's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006147	polr2d	100	90.278	ENSG00000144231	POLR2D	100	95.192	Homo_sapiens
ENSCSEG00000006147	polr2d	100	96.528	ENSAPOG00000023553	polr2d	100	96.528	Acanthochromis_polyacanthus
ENSCSEG00000006147	polr2d	100	89.041	ENSAMEG00000011746	POLR2D	100	89.041	Ailuropoda_melanoleuca
ENSCSEG00000006147	polr2d	100	96.528	ENSAOCG00000007295	polr2d	100	96.528	Amphiprion_ocellaris
ENSCSEG00000006147	polr2d	100	96.528	ENSAPEG00000018714	polr2d	100	96.528	Amphiprion_percula
ENSCSEG00000006147	polr2d	100	95.139	ENSATEG00000020416	polr2d	100	95.139	Anabas_testudineus
ENSCSEG00000006147	polr2d	100	89.583	ENSACAG00000005255	POLR2D	100	89.583	Anolis_carolinensis
ENSCSEG00000006147	polr2d	100	90.278	ENSANAG00000019959	POLR2D	100	90.278	Aotus_nancymaae
ENSCSEG00000006147	polr2d	100	96.528	ENSACLG00000009919	polr2d	100	74.306	Astatotilapia_calliptera
ENSCSEG00000006147	polr2d	92	96.992	ENSAMXG00000008954	polr2d	100	93.056	Astyanax_mexicanus
ENSCSEG00000006147	polr2d	100	90.278	ENSBTAG00000053244	POLR2D	100	90.278	Bos_taurus
ENSCSEG00000006147	polr2d	99	58.621	WBGene00018391	rpb-4	100	58.621	Caenorhabditis_elegans
ENSCSEG00000006147	polr2d	100	90.278	ENSCJAG00000042216	-	100	90.278	Callithrix_jacchus
ENSCSEG00000006147	polr2d	100	89.583	ENSCJAG00000021814	-	100	89.583	Callithrix_jacchus
ENSCSEG00000006147	polr2d	100	90.278	ENSCAFG00000004311	POLR2D	100	90.278	Canis_familiaris
ENSCSEG00000006147	polr2d	100	90.278	ENSCAFG00020003617	POLR2D	100	90.278	Canis_lupus_dingo
ENSCSEG00000006147	polr2d	100	90.278	ENSCHIG00000025995	POLR2D	100	90.278	Capra_hircus
ENSCSEG00000006147	polr2d	81	94.017	ENSTSYG00000036021	POLR2D	100	94.017	Carlito_syrichta
ENSCSEG00000006147	polr2d	100	90.278	ENSCPOG00000002571	POLR2D	100	90.278	Cavia_porcellus
ENSCSEG00000006147	polr2d	100	90.278	ENSCCAG00000037709	POLR2D	100	90.278	Cebus_capucinus
ENSCSEG00000006147	polr2d	100	90.972	ENSCATG00000036749	POLR2D	100	90.972	Cercocebus_atys
ENSCSEG00000006147	polr2d	100	89.583	ENSCLAG00000004449	POLR2D	100	89.583	Chinchilla_lanigera
ENSCSEG00000006147	polr2d	100	90.972	ENSCSAG00000016861	POLR2D	100	90.972	Chlorocebus_sabaeus
ENSCSEG00000006147	polr2d	81	94.872	ENSCHOG00000013850	POLR2D	100	94.872	Choloepus_hoffmanni
ENSCSEG00000006147	polr2d	100	90.972	ENSCPBG00000019132	POLR2D	51	90.972	Chrysemys_picta_bellii
ENSCSEG00000006147	polr2d	89	88.281	ENSCING00000011474	-	96	88.281	Ciona_intestinalis
ENSCSEG00000006147	polr2d	99	81.250	ENSCSAVG00000008353	-	99	81.250	Ciona_savignyi
ENSCSEG00000006147	polr2d	100	90.278	ENSCANG00000043665	POLR2D	100	90.278	Colobus_angolensis_palliatus
ENSCSEG00000006147	polr2d	100	90.278	ENSCGRG00001013608	Polr2d	100	90.278	Cricetulus_griseus_chok1gshd
ENSCSEG00000006147	polr2d	81	94.872	ENSCGRG00000012624	Polr2d	100	94.872	Cricetulus_griseus_crigri
ENSCSEG00000006147	polr2d	100	94.444	ENSCVAG00000000779	polr2d	100	94.444	Cyprinodon_variegatus
ENSCSEG00000006147	polr2d	97	94.286	ENSDARG00000076509	polr2d	99	94.286	Danio_rerio
ENSCSEG00000006147	polr2d	100	90.972	ENSDNOG00000008527	POLR2D	100	90.972	Dasypus_novemcinctus
ENSCSEG00000006147	polr2d	100	90.278	ENSDORG00000026897	Polr2d	100	90.278	Dipodomys_ordii
ENSCSEG00000006147	polr2d	92	77.444	FBgn0263757	Rpb4	96	77.444	Drosophila_melanogaster
ENSCSEG00000006147	polr2d	98	90.071	ENSEBUG00000007675	polr2d	99	90.071	Eptatretus_burgeri
ENSCSEG00000006147	polr2d	100	90.278	ENSEASG00005007103	POLR2D	100	90.278	Equus_asinus_asinus
ENSCSEG00000006147	polr2d	100	90.278	ENSECAG00000000556	POLR2D	100	90.278	Equus_caballus
ENSCSEG00000006147	polr2d	100	93.750	ENSELUG00000005928	polr2d	100	93.750	Esox_lucius
ENSCSEG00000006147	polr2d	100	90.278	ENSFCAG00000027816	POLR2D	100	90.278	Felis_catus
ENSCSEG00000006147	polr2d	100	90.278	ENSFALG00000003528	POLR2D	100	90.278	Ficedula_albicollis
ENSCSEG00000006147	polr2d	100	88.889	ENSFDAG00000007217	POLR2D	100	88.889	Fukomys_damarensis
ENSCSEG00000006147	polr2d	98	93.617	ENSGMOG00000001823	polr2d	98	93.617	Gadus_morhua
ENSCSEG00000006147	polr2d	100	90.278	ENSGALG00000002057	POLR2D	100	90.278	Gallus_gallus
ENSCSEG00000006147	polr2d	100	95.139	ENSGAFG00000016932	polr2d	71	95.139	Gambusia_affinis
ENSCSEG00000006147	polr2d	100	94.444	ENSGACG00000004639	polr2d	100	94.444	Gasterosteus_aculeatus
ENSCSEG00000006147	polr2d	100	90.278	ENSGAGG00000021308	POLR2D	100	90.278	Gopherus_agassizii
ENSCSEG00000006147	polr2d	100	90.278	ENSGGOG00000004723	POLR2D	100	90.278	Gorilla_gorilla
ENSCSEG00000006147	polr2d	100	89.583	ENSHGLG00000016570	Polr2d	100	89.583	Heterocephalus_glaber_female
ENSCSEG00000006147	polr2d	100	89.583	ENSHGLG00100013785	Polr2d	100	89.583	Heterocephalus_glaber_male
ENSCSEG00000006147	polr2d	100	92.361	ENSHCOG00000006425	polr2d	100	92.361	Hippocampus_comes
ENSCSEG00000006147	polr2d	97	92.857	ENSIPUG00000011192	polr2d	99	92.857	Ictalurus_punctatus
ENSCSEG00000006147	polr2d	100	88.194	ENSSTOG00000023329	POLR2D	100	88.194	Ictidomys_tridecemlineatus
ENSCSEG00000006147	polr2d	81	89.744	ENSJJAG00000005723	-	94	89.744	Jaculus_jaculus
ENSCSEG00000006147	polr2d	100	90.278	ENSJJAG00000015053	-	100	90.278	Jaculus_jaculus
ENSCSEG00000006147	polr2d	98	83.688	ENSJJAG00000000783	-	99	83.688	Jaculus_jaculus
ENSCSEG00000006147	polr2d	85	96.721	ENSKMAG00000010677	polr2d	68	96.721	Kryptolebias_marmoratus
ENSCSEG00000006147	polr2d	100	92.361	ENSLACG00000017253	POLR2D	100	92.361	Latimeria_chalumnae
ENSCSEG00000006147	polr2d	100	94.444	ENSLOCG00000009106	polr2d	100	94.444	Lepisosteus_oculatus
ENSCSEG00000006147	polr2d	100	89.583	ENSLAFG00000001848	POLR2D	100	89.583	Loxodonta_africana
ENSCSEG00000006147	polr2d	100	90.972	ENSMFAG00000031937	POLR2D	100	90.972	Macaca_fascicularis
ENSCSEG00000006147	polr2d	100	90.972	ENSMMUG00000001989	POLR2D	100	90.972	Macaca_mulatta
ENSCSEG00000006147	polr2d	100	90.972	ENSMNEG00000035505	POLR2D	100	90.972	Macaca_nemestrina
ENSCSEG00000006147	polr2d	100	90.972	ENSMLEG00000035827	POLR2D	100	90.972	Mandrillus_leucophaeus
ENSCSEG00000006147	polr2d	100	90.278	ENSMGAG00000001248	POLR2D	100	90.278	Meleagris_gallopavo
ENSCSEG00000006147	polr2d	100	89.583	ENSMAUG00000014518	Polr2d	100	89.583	Mesocricetus_auratus
ENSCSEG00000006147	polr2d	100	89.583	ENSMICG00000009931	POLR2D	100	89.583	Microcebus_murinus
ENSCSEG00000006147	polr2d	100	87.500	ENSMOCG00000019367	Polr2d	100	87.500	Microtus_ochrogaster
ENSCSEG00000006147	polr2d	100	75.694	ENSMODG00000025029	-	100	75.694	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	90.972	ENSMODG00000018653	-	100	90.972	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025026	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025027	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025028	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025036	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	75.694	ENSMODG00000025035	-	100	75.694	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	75.694	ENSMODG00000025034	-	100	75.694	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025033	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	75.000	ENSMODG00000025032	-	100	75.000	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025031	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	76.389	ENSMODG00000025030	-	100	76.389	Monodelphis_domestica
ENSCSEG00000006147	polr2d	100	96.528	ENSMALG00000018266	polr2d	100	96.528	Monopterus_albus
ENSCSEG00000006147	polr2d	100	90.278	MGP_CAROLIEiJ_G0022066	Polr2d	100	90.278	Mus_caroli
ENSCSEG00000006147	polr2d	100	90.278	ENSMUSG00000024258	Polr2d	100	90.278	Mus_musculus
ENSCSEG00000006147	polr2d	100	90.278	MGP_PahariEiJ_G0018800	Polr2d	100	90.278	Mus_pahari
ENSCSEG00000006147	polr2d	100	90.278	MGP_SPRETEiJ_G0022977	Polr2d	100	90.278	Mus_spretus
ENSCSEG00000006147	polr2d	100	90.278	ENSMPUG00000016685	POLR2D	100	90.278	Mustela_putorius_furo
ENSCSEG00000006147	polr2d	82	94.915	ENSMLUG00000006862	POLR2D	100	94.915	Myotis_lucifugus
ENSCSEG00000006147	polr2d	100	90.278	ENSNGAG00000014862	Polr2d	100	90.278	Nannospalax_galili
ENSCSEG00000006147	polr2d	100	90.278	ENSNLEG00000027191	POLR2D	100	90.278	Nomascus_leucogenys
ENSCSEG00000006147	polr2d	81	94.017	ENSOPRG00000005327	POLR2D	100	94.017	Ochotona_princeps
ENSCSEG00000006147	polr2d	100	89.583	ENSODEG00000005262	POLR2D	100	89.583	Octodon_degus
ENSCSEG00000006147	polr2d	100	97.222	ENSONIG00000017290	polr2d	100	97.222	Oreochromis_niloticus
ENSCSEG00000006147	polr2d	82	95.763	ENSOANG00000013216	POLR2D	100	95.763	Ornithorhynchus_anatinus
ENSCSEG00000006147	polr2d	100	84.138	ENSOCUG00000021449	-	100	84.138	Oryctolagus_cuniculus
ENSCSEG00000006147	polr2d	97	89.286	ENSOCUG00000023403	-	99	89.286	Oryctolagus_cuniculus
ENSCSEG00000006147	polr2d	100	91.667	ENSORLG00000005266	polr2d	100	91.667	Oryzias_latipes
ENSCSEG00000006147	polr2d	100	92.361	ENSORLG00020006647	polr2d	100	92.361	Oryzias_latipes_hni
ENSCSEG00000006147	polr2d	100	91.667	ENSORLG00015003222	polr2d	100	91.667	Oryzias_latipes_hsok
ENSCSEG00000006147	polr2d	100	93.056	ENSOMEG00000018915	polr2d	100	93.056	Oryzias_melastigma
ENSCSEG00000006147	polr2d	100	88.356	ENSOGAG00000017118	POLR2D	100	88.356	Otolemur_garnettii
ENSCSEG00000006147	polr2d	100	90.278	ENSOARG00000015995	POLR2D	100	90.278	Ovis_aries
ENSCSEG00000006147	polr2d	100	90.278	ENSPPRG00000020222	POLR2D	100	90.278	Panthera_pardus
ENSCSEG00000006147	polr2d	100	90.278	ENSPTIG00000018618	POLR2D	100	90.278	Panthera_tigris_altaica
ENSCSEG00000006147	polr2d	100	90.278	ENSPTRG00000012436	POLR2D	100	90.278	Pan_troglodytes
ENSCSEG00000006147	polr2d	100	90.972	ENSPANG00000018602	POLR2D	100	90.972	Papio_anubis
ENSCSEG00000006147	polr2d	100	91.667	ENSPKIG00000012166	polr2d	100	91.667	Paramormyrops_kingsleyae
ENSCSEG00000006147	polr2d	82	95.763	ENSPSIG00000002873	POLR2D	100	95.763	Pelodiscus_sinensis
ENSCSEG00000006147	polr2d	100	90.278	ENSPEMG00000018244	Polr2d	100	90.278	Peromyscus_maniculatus_bairdii
ENSCSEG00000006147	polr2d	100	86.806	ENSPMAG00000005021	polr2d	99	86.806	Petromyzon_marinus
ENSCSEG00000006147	polr2d	100	95.139	ENSPFOG00000008969	polr2d	100	95.139	Poecilia_formosa
ENSCSEG00000006147	polr2d	100	95.139	ENSPLAG00000017210	polr2d	100	95.139	Poecilia_latipinna
ENSCSEG00000006147	polr2d	100	95.139	ENSPMEG00000005160	polr2d	100	95.139	Poecilia_mexicana
ENSCSEG00000006147	polr2d	72	100.000	ENSPREG00000021862	polr2d	100	100.000	Poecilia_reticulata
ENSCSEG00000006147	polr2d	100	90.278	ENSPPYG00000012759	POLR2D	100	90.278	Pongo_abelii
ENSCSEG00000006147	polr2d	100	89.583	ENSPCAG00000001396	POLR2D	100	89.583	Procavia_capensis
ENSCSEG00000006147	polr2d	100	89.583	ENSPCOG00000022076	POLR2D	100	89.583	Propithecus_coquereli
ENSCSEG00000006147	polr2d	100	89.583	ENSPVAG00000004002	POLR2D	100	89.583	Pteropus_vampyrus
ENSCSEG00000006147	polr2d	100	94.483	ENSPNAG00000018246	polr2d	100	94.483	Pygocentrus_nattereri
ENSCSEG00000006147	polr2d	100	90.278	ENSRNOG00000016231	Polr2d	100	90.278	Rattus_norvegicus
ENSCSEG00000006147	polr2d	100	90.278	ENSRBIG00000039326	POLR2D	100	90.278	Rhinopithecus_bieti
ENSCSEG00000006147	polr2d	100	90.278	ENSRROG00000023289	POLR2D	100	90.278	Rhinopithecus_roxellana
ENSCSEG00000006147	polr2d	100	91.667	ENSSHAG00000014817	-	100	91.667	Sarcophilus_harrisii
ENSCSEG00000006147	polr2d	91	97.710	ENSSFOG00015024204	polr2d	100	93.056	Scleropages_formosus
ENSCSEG00000006147	polr2d	100	97.917	ENSSDUG00000006060	polr2d	100	97.917	Seriola_dumerili
ENSCSEG00000006147	polr2d	99	97.902	ENSSLDG00000024485	polr2d	99	97.902	Seriola_lalandi_dorsalis
ENSCSEG00000006147	polr2d	81	94.017	ENSSARG00000009037	POLR2D	100	94.017	Sorex_araneus
ENSCSEG00000006147	polr2d	100	90.278	ENSSPUG00000014915	POLR2D	100	90.278	Sphenodon_punctatus
ENSCSEG00000006147	polr2d	100	97.222	ENSSPAG00000013386	polr2d	100	97.222	Stegastes_partitus
ENSCSEG00000006147	polr2d	100	90.278	ENSSSCG00000039230	POLR2D	100	90.278	Sus_scrofa
ENSCSEG00000006147	polr2d	100	90.278	ENSTGUG00000005773	POLR2D	99	90.278	Taeniopygia_guttata
ENSCSEG00000006147	polr2d	100	93.056	ENSTRUG00000004740	polr2d	100	93.056	Takifugu_rubripes
ENSCSEG00000006147	polr2d	100	94.444	ENSTNIG00000011210	polr2d	100	94.444	Tetraodon_nigroviridis
ENSCSEG00000006147	polr2d	81	94.872	ENSTBEG00000006081	POLR2D	100	94.872	Tupaia_belangeri
ENSCSEG00000006147	polr2d	81	94.872	ENSTTRG00000010055	POLR2D	100	94.872	Tursiops_truncatus
ENSCSEG00000006147	polr2d	90	94.574	ENSUAMG00000024374	POLR2D	98	94.574	Ursus_americanus
ENSCSEG00000006147	polr2d	83	94.167	ENSUMAG00000008280	POLR2D	100	95.192	Ursus_maritimus
ENSCSEG00000006147	polr2d	81	94.872	ENSVPAG00000007239	POLR2D	100	94.872	Vicugna_pacos
ENSCSEG00000006147	polr2d	100	90.278	ENSVVUG00000008616	POLR2D	100	90.278	Vulpes_vulpes
ENSCSEG00000006147	polr2d	100	88.889	ENSXETG00000002955	polr2d	100	88.889	Xenopus_tropicalis
ENSCSEG00000006147	polr2d	72	100.000	ENSXCOG00000012668	polr2d	100	100.000	Xiphophorus_couchianus
ENSCSEG00000006147	polr2d	72	100.000	ENSXMAG00000014031	polr2d	100	100.000	Xiphophorus_maculatus