EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006163 (Gene tree)
Gene ID: 103378890
Gene Symbol: trmt10c
Alias: rg9mtd1|wu:fb53e06|zgc:103570
Full Name: tRNA methyltransferase 10C%2C mitochondrial RNase P subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1482 bases
Position: chr5:7620658-7622139
Accession: 103378890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009605	tRNA_m1G_MT	PF01746.21	2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009717	-	1482	XM_008310252	ENSCSEP00000009605	493 (aa)	XP_008308474	UPI0004952ACC

Gene Model

Click here to download ENSCSEG00000006163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006163	trmt10c	78	45.128	ENSG00000174173	TRMT10C	89	44.730	Homo_sapiens
ENSCSEG00000006163	trmt10c	66	56.637	ENSAPOG00000003883	trmt10c	88	60.065	Acanthochromis_polyacanthus
ENSCSEG00000006163	trmt10c	80	45.202	ENSAMEG00000019657	TRMT10C	86	44.949	Ailuropoda_melanoleuca
ENSCSEG00000006163	trmt10c	58	72.081	ENSACIG00000022244	trmt10c	83	72.081	Amphilophus_citrinellus
ENSCSEG00000006163	trmt10c	60	57.742	ENSAOCG00000005855	trmt10c	89	57.468	Amphiprion_ocellaris
ENSCSEG00000006163	trmt10c	60	58.065	ENSAPEG00000021992	trmt10c	89	57.792	Amphiprion_percula
ENSCSEG00000006163	trmt10c	83	54.722	ENSATEG00000012576	trmt10c	94	54.722	Anabas_testudineus
ENSCSEG00000006163	trmt10c	70	46.221	ENSAPLG00000011561	TRMT10C	82	46.221	Anas_platyrhynchos
ENSCSEG00000006163	trmt10c	70	52.174	ENSACAG00000011903	TRMT10C	75	52.754	Anolis_carolinensis
ENSCSEG00000006163	trmt10c	71	60.665	ENSACLG00000024269	trmt10c	83	60.665	Astatotilapia_calliptera
ENSCSEG00000006163	trmt10c	75	51.047	ENSAMXG00000014749	trmt10c	86	51.047	Astyanax_mexicanus
ENSCSEG00000006163	trmt10c	80	44.584	ENSBTAG00000024027	TRMT10C	85	44.444	Bos_taurus
ENSCSEG00000006163	trmt10c	80	41.542	ENSCAFG00000031607	TRMT10C	90	41.294	Canis_familiaris
ENSCSEG00000006163	trmt10c	80	41.791	ENSCAFG00020008862	TRMT10C	90	41.542	Canis_lupus_dingo
ENSCSEG00000006163	trmt10c	80	44.332	ENSCHIG00000021446	TRMT10C	84	44.192	Capra_hircus
ENSCSEG00000006163	trmt10c	78	44.898	ENSCLAG00000017738	TRMT10C	85	44.246	Chinchilla_lanigera
ENSCSEG00000006163	trmt10c	80	43.939	ENSCSAG00000018722	TRMT10C	88	43.544	Chlorocebus_sabaeus
ENSCSEG00000006163	trmt10c	80	42.172	ENSCHOG00000010108	TRMT10C	92	42.424	Choloepus_hoffmanni
ENSCSEG00000006163	trmt10c	69	45.797	ENSCGRG00001006603	Trmt10c	79	44.477	Cricetulus_griseus_chok1gshd
ENSCSEG00000006163	trmt10c	69	45.797	ENSCGRG00000019728	Trmt10c	79	44.477	Cricetulus_griseus_crigri
ENSCSEG00000006163	trmt10c	97	52.459	ENSCVAG00000013751	trmt10c	97	52.459	Cyprinodon_variegatus
ENSCSEG00000006163	trmt10c	70	53.409	ENSDARG00000041575	trmt10c	83	53.409	Danio_rerio
ENSCSEG00000006163	trmt10c	80	42.025	ENSDNOG00000012650	TRMT10C	85	42.785	Dasypus_novemcinctus
ENSCSEG00000006163	trmt10c	77	43.557	ENSDORG00000027529	Trmt10c	88	43.264	Dipodomys_ordii
ENSCSEG00000006163	trmt10c	56	40.070	FBgn0034351	rswl	64	38.408	Drosophila_melanogaster
ENSCSEG00000006163	trmt10c	69	37.901	ENSEBUG00000015332	trmt10c	83	36.785	Eptatretus_burgeri
ENSCSEG00000006163	trmt10c	85	42.588	ENSEASG00005011186	TRMT10C	92	41.981	Equus_asinus_asinus
ENSCSEG00000006163	trmt10c	80	43.939	ENSECAG00000001533	TRMT10C	85	43.291	Equus_caballus
ENSCSEG00000006163	trmt10c	70	47.550	ENSEEUG00000004696	TRMT10C	81	47.262	Erinaceus_europaeus
ENSCSEG00000006163	trmt10c	75	54.737	ENSELUG00000002553	trmt10c	85	54.474	Esox_lucius
ENSCSEG00000006163	trmt10c	80	42.145	ENSFCAG00000003430	TRMT10C	86	43.532	Felis_catus
ENSCSEG00000006163	trmt10c	71	46.610	ENSFALG00000014236	TRMT10C	80	46.023	Ficedula_albicollis
ENSCSEG00000006163	trmt10c	69	46.957	ENSFDAG00000001576	TRMT10C	75	47.093	Fukomys_damarensis
ENSCSEG00000006163	trmt10c	98	50.099	ENSFHEG00000015379	trmt10c	98	49.702	Fundulus_heteroclitus
ENSCSEG00000006163	trmt10c	71	51.714	ENSGMOG00000008573	trmt10c	97	52.125	Gadus_morhua
ENSCSEG00000006163	trmt10c	72	45.961	ENSGALG00000015328	TRMT10C	81	45.098	Gallus_gallus
ENSCSEG00000006163	trmt10c	73	57.560	ENSGACG00000015281	trmt10c	89	56.233	Gasterosteus_aculeatus
ENSCSEG00000006163	trmt10c	55	30.769	ENSGACG00000019076	trmt10b	95	30.420	Gasterosteus_aculeatus
ENSCSEG00000006163	trmt10c	76	48.936	ENSGAGG00000022825	TRMT10C	79	51.532	Gopherus_agassizii
ENSCSEG00000006163	trmt10c	78	45.128	ENSGGOG00000006484	TRMT10C	89	44.473	Gorilla_gorilla
ENSCSEG00000006163	trmt10c	60	59.396	ENSHBUG00000000010	trmt10c	87	59.122	Haplochromis_burtoni
ENSCSEG00000006163	trmt10c	84	41.866	ENSHGLG00000019767	TRMT10C	93	41.866	Heterocephalus_glaber_female
ENSCSEG00000006163	trmt10c	84	41.866	ENSHGLG00100020191	TRMT10C	93	41.866	Heterocephalus_glaber_male
ENSCSEG00000006163	trmt10c	86	47.727	ENSIPUG00000010010	trmt10c	87	47.955	Ictalurus_punctatus
ENSCSEG00000006163	trmt10c	80	43.434	ENSSTOG00000012199	TRMT10C	85	43.038	Ictidomys_tridecemlineatus
ENSCSEG00000006163	trmt10c	83	51.896	ENSKMAG00000022027	trmt10c	92	51.659	Kryptolebias_marmoratus
ENSCSEG00000006163	trmt10c	100	52.079	ENSLBEG00000013143	trmt10c	99	52.079	Labrus_bergylta
ENSCSEG00000006163	trmt10c	62	57.329	ENSLACG00000002036	TRMT10C	87	53.009	Latimeria_chalumnae
ENSCSEG00000006163	trmt10c	70	54.701	ENSLOCG00000017802	trmt10c	75	54.416	Lepisosteus_oculatus
ENSCSEG00000006163	trmt10c	70	47.674	ENSLAFG00000009677	TRMT10C	79	47.674	Loxodonta_africana
ENSCSEG00000006163	trmt10c	80	43.939	ENSMMUG00000017780	TRMT10C	84	43.291	Macaca_mulatta
ENSCSEG00000006163	trmt10c	52	64.202	ENSMAMG00000003124	trmt10c	73	64.683	Mastacembelus_armatus
ENSCSEG00000006163	trmt10c	60	59.396	ENSMZEG00005000671	trmt10c	86	59.122	Maylandia_zebra
ENSCSEG00000006163	trmt10c	74	44.504	ENSMAUG00000009904	Trmt10c	85	44.595	Mesocricetus_auratus
ENSCSEG00000006163	trmt10c	70	45.977	ENSMOCG00000020572	Trmt10c	79	44.957	Microtus_ochrogaster
ENSCSEG00000006163	trmt10c	75	45.144	ENSMODG00000025175	TRMT10C	85	44.591	Monodelphis_domestica
ENSCSEG00000006163	trmt10c	100	50.877	ENSMALG00000016236	trmt10c	99	50.682	Monopterus_albus
ENSCSEG00000006163	trmt10c	77	46.134	MGP_CAROLIEiJ_G0020812	Trmt10c	88	45.220	Mus_caroli
ENSCSEG00000006163	trmt10c	77	46.134	ENSMUSG00000044763	Trmt10c	88	45.220	Mus_musculus
ENSCSEG00000006163	trmt10c	81	45.185	MGP_PahariEiJ_G0016512	Trmt10c	92	44.417	Mus_pahari
ENSCSEG00000006163	trmt10c	77	46.134	MGP_SPRETEiJ_G0021712	Trmt10c	88	45.220	Mus_spretus
ENSCSEG00000006163	trmt10c	80	44.110	ENSMPUG00000019979	TRMT10C	85	43.073	Mustela_putorius_furo
ENSCSEG00000006163	trmt10c	70	45.977	ENSMLUG00000028638	-	80	45.245	Myotis_lucifugus
ENSCSEG00000006163	trmt10c	70	45.690	ENSMLUG00000030097	-	79	45.245	Myotis_lucifugus
ENSCSEG00000006163	trmt10c	70	46.802	ENSNGAG00000022215	Trmt10c	79	46.802	Nannospalax_galili
ENSCSEG00000006163	trmt10c	72	46.518	ENSOPRG00000007388	TRMT10C	83	46.518	Ochotona_princeps
ENSCSEG00000006163	trmt10c	77	57.545	ENSONIG00000003128	trmt10c	98	57.545	Oreochromis_niloticus
ENSCSEG00000006163	trmt10c	69	46.334	ENSOANG00000007508	TRMT10C	92	44.744	Ornithorhynchus_anatinus
ENSCSEG00000006163	trmt10c	83	41.827	ENSOCUG00000011103	TRMT10C	88	41.505	Oryctolagus_cuniculus
ENSCSEG00000006163	trmt10c	90	50.866	ENSORLG00000004992	trmt10c	90	50.866	Oryzias_latipes
ENSCSEG00000006163	trmt10c	90	50.866	ENSORLG00020016083	trmt10c	90	50.649	Oryzias_latipes_hni
ENSCSEG00000006163	trmt10c	90	50.649	ENSORLG00015014590	trmt10c	90	50.433	Oryzias_latipes_hsok
ENSCSEG00000006163	trmt10c	73	46.237	ENSOGAG00000001819	TRMT10C	85	46.505	Otolemur_garnettii
ENSCSEG00000006163	trmt10c	80	44.332	ENSOARG00000001677	TRMT10C	84	44.192	Ovis_aries
ENSCSEG00000006163	trmt10c	81	40.594	ENSPTIG00000002271	TRMT10C	86	43.532	Panthera_tigris_altaica
ENSCSEG00000006163	trmt10c	78	44.615	ENSPTRG00000015171	TRMT10C	89	44.216	Pan_troglodytes
ENSCSEG00000006163	trmt10c	78	44.615	ENSPTRG00000051763	-	89	44.216	Pan_troglodytes
ENSCSEG00000006163	trmt10c	70	52.975	ENSPKIG00000010307	trmt10c	73	53.913	Paramormyrops_kingsleyae
ENSCSEG00000006163	trmt10c	70	52.011	ENSPSIG00000004052	TRMT10C	80	52.738	Pelodiscus_sinensis
ENSCSEG00000006163	trmt10c	75	46.032	ENSPEMG00000006986	Trmt10c	86	45.745	Peromyscus_maniculatus_bairdii
ENSCSEG00000006163	trmt10c	80	44.665	ENSPCIG00000016080	TRMT10C	89	44.417	Phascolarctos_cinereus
ENSCSEG00000006163	trmt10c	74	57.520	ENSPFOG00000009282	trmt10c	88	57.632	Poecilia_formosa
ENSCSEG00000006163	trmt10c	91	52.807	ENSPREG00000021808	trmt10c	94	53.015	Poecilia_reticulata
ENSCSEG00000006163	trmt10c	70	47.701	ENSPPYG00000013592	TRMT10C	77	47.550	Pongo_abelii
ENSCSEG00000006163	trmt10c	70	47.126	ENSPCAG00000001290	TRMT10C	81	46.110	Procavia_capensis
ENSCSEG00000006163	trmt10c	83	41.446	ENSPVAG00000009885	TRMT10C	92	41.646	Pteropus_vampyrus
ENSCSEG00000006163	trmt10c	80	54.348	ENSPNYG00000003607	trmt10c	91	54.348	Pundamilia_nyererei
ENSCSEG00000006163	trmt10c	77	44.041	ENSRNOG00000039567	Trmt10c	88	45.052	Rattus_norvegicus
ENSCSEG00000006163	trmt10c	69	47.826	ENSSBOG00000023326	TRMT10C	86	47.384	Saimiri_boliviensis_boliviensis
ENSCSEG00000006163	trmt10c	70	46.742	ENSSHAG00000008854	TRMT10C	77	46.176	Sarcophilus_harrisii
ENSCSEG00000006163	trmt10c	80	49.261	ENSSFOG00015008704	trmt10c	86	48.768	Scleropages_formosus
ENSCSEG00000006163	trmt10c	99	56.778	ENSSMAG00000021322	trmt10c	99	56.778	Scophthalmus_maximus
ENSCSEG00000006163	trmt10c	76	63.588	ENSSDUG00000006430	trmt10c	80	63.212	Seriola_dumerili
ENSCSEG00000006163	trmt10c	71	47.339	ENSSARG00000014342	TRMT10C	83	47.765	Sorex_araneus
ENSCSEG00000006163	trmt10c	70	46.418	ENSSPUG00000018495	TRMT10C	80	46.418	Sphenodon_punctatus
ENSCSEG00000006163	trmt10c	64	60.436	ENSSPAG00000016082	trmt10c	81	59.375	Stegastes_partitus
ENSCSEG00000006163	trmt10c	80	44.332	ENSSSCG00000011956	TRMT10C	86	43.939	Sus_scrofa
ENSCSEG00000006163	trmt10c	71	47.009	ENSTGUG00000013621	TRMT10C	99	46.418	Taeniopygia_guttata
ENSCSEG00000006163	trmt10c	61	58.095	ENSTRUG00000024252	trmt10c	94	57.778	Takifugu_rubripes
ENSCSEG00000006163	trmt10c	77	55.499	ENSTNIG00000009440	trmt10c	99	54.731	Tetraodon_nigroviridis
ENSCSEG00000006163	trmt10c	71	46.307	ENSTBEG00000013894	TRMT10C	83	46.023	Tupaia_belangeri
ENSCSEG00000006163	trmt10c	77	45.337	ENSTTRG00000015004	TRMT10C	87	44.935	Tursiops_truncatus
ENSCSEG00000006163	trmt10c	80	43.216	ENSUAMG00000017378	TRMT10C	86	44.949	Ursus_americanus
ENSCSEG00000006163	trmt10c	80	42.965	ENSUMAG00000003252	TRMT10C	86	44.697	Ursus_maritimus
ENSCSEG00000006163	trmt10c	80	43.532	ENSVVUG00000021735	TRMT10C	86	43.284	Vulpes_vulpes
ENSCSEG00000006163	trmt10c	74	46.612	ENSXETG00000029921	trmt10c	94	52.033	Xenopus_tropicalis
ENSCSEG00000006163	trmt10c	55	61.484	ENSXCOG00000002876	trmt10c	92	61.484	Xiphophorus_couchianus
ENSCSEG00000006163	trmt10c	100	50.775	ENSXMAG00000019205	trmt10c	99	50.969	Xiphophorus_maculatus