EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006217 (Gene tree)
Gene ID: 103385019
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6853 bases
Position: chr10:11668493-11675345
Accession: 103385019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009694	B3_4	PF03483.17	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009808	-	5000	XM_008318765	ENSCSEP00000009694	574 (aa)	XP_008316987	-

Gene Model

Click here to download ENSCSEG00000006217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006217	lrrc47	95	53.217	ENSG00000130764	LRRC47	99	52.000	Homo_sapiens
ENSCSEG00000006217	lrrc47	96	78.891	ENSAPOG00000019553	lrrc47	100	78.891	Acanthochromis_polyacanthus
ENSCSEG00000006217	lrrc47	73	58.065	ENSAMEG00000009152	LRRC47	95	57.143	Ailuropoda_melanoleuca
ENSCSEG00000006217	lrrc47	65	61.155	ENSAPLG00000003167	LRRC47	99	60.105	Anas_platyrhynchos
ENSCSEG00000006217	lrrc47	64	59.947	ENSACAG00000008267	LRRC47	100	60.212	Anolis_carolinensis
ENSCSEG00000006217	lrrc47	95	52.174	ENSANAG00000025576	LRRC47	99	51.652	Aotus_nancymaae
ENSCSEG00000006217	lrrc47	95	52.091	ENSBTAG00000004738	LRRC47	98	51.568	Bos_taurus
ENSCSEG00000006217	lrrc47	92	53.610	ENSCAFG00000019492	LRRC47	97	52.613	Canis_familiaris
ENSCSEG00000006217	lrrc47	96	53.103	ENSCAFG00020009667	LRRC47	99	52.797	Canis_lupus_dingo
ENSCSEG00000006217	lrrc47	95	52.972	ENSCHIG00000022607	LRRC47	98	52.448	Capra_hircus
ENSCSEG00000006217	lrrc47	92	52.973	ENSTSYG00000009326	LRRC47	97	51.773	Carlito_syrichta
ENSCSEG00000006217	lrrc47	64	57.754	ENSCAPG00000016517	LRRC47	99	57.219	Cavia_aperea
ENSCSEG00000006217	lrrc47	95	51.309	ENSCPOG00000014931	LRRC47	95	50.611	Cavia_porcellus
ENSCSEG00000006217	lrrc47	95	52.870	ENSCCAG00000024895	LRRC47	99	52.000	Cebus_capucinus
ENSCSEG00000006217	lrrc47	95	53.391	ENSCATG00000029337	LRRC47	99	52.431	Cercocebus_atys
ENSCSEG00000006217	lrrc47	95	52.632	ENSCLAG00000006093	LRRC47	99	52.105	Chinchilla_lanigera
ENSCSEG00000006217	lrrc47	95	53.565	ENSCSAG00000000727	LRRC47	99	52.348	Chlorocebus_sabaeus
ENSCSEG00000006217	lrrc47	96	50.588	ENSCPBG00000019404	LRRC47	99	49.916	Chrysemys_picta_bellii
ENSCSEG00000006217	lrrc47	76	55.895	ENSCANG00000030701	LRRC47	96	54.367	Colobus_angolensis_palliatus
ENSCSEG00000006217	lrrc47	95	53.147	ENSCGRG00001015159	Lrrc47	89	52.513	Cricetulus_griseus_chok1gshd
ENSCSEG00000006217	lrrc47	64	59.416	ENSCGRG00000017336	Lrrc47	99	58.730	Cricetulus_griseus_crigri
ENSCSEG00000006217	lrrc47	64	59.309	ENSDORG00000016594	Lrrc47	99	58.245	Dipodomys_ordii
ENSCSEG00000006217	lrrc47	95	53.391	ENSEASG00005021788	LRRC47	99	52.174	Equus_asinus_asinus
ENSCSEG00000006217	lrrc47	95	53.391	ENSECAG00000022472	LRRC47	89	52.348	Equus_caballus
ENSCSEG00000006217	lrrc47	97	66.432	ENSELUG00000017544	lrrc47	98	66.084	Esox_lucius
ENSCSEG00000006217	lrrc47	89	51.692	ENSFCAG00000011632	LRRC47	89	53.360	Felis_catus
ENSCSEG00000006217	lrrc47	69	60.406	ENSFALG00000009631	LRRC47	91	60.406	Ficedula_albicollis
ENSCSEG00000006217	lrrc47	96	64.550	ENSGMOG00000015674	lrrc47	100	65.426	Gadus_morhua
ENSCSEG00000006217	lrrc47	95	50.000	ENSGALG00000050995	LRRC47	99	49.825	Gallus_gallus
ENSCSEG00000006217	lrrc47	96	73.262	ENSGACG00000005550	lrrc47	99	74.510	Gasterosteus_aculeatus
ENSCSEG00000006217	lrrc47	97	51.171	ENSGAGG00000022584	LRRC47	99	51.171	Gopherus_agassizii
ENSCSEG00000006217	lrrc47	95	53.391	ENSGGOG00000015571	LRRC47	99	52.174	Gorilla_gorilla
ENSCSEG00000006217	lrrc47	95	52.007	ENSHGLG00000018278	LRRC47	95	51.134	Heterocephalus_glaber_female
ENSCSEG00000006217	lrrc47	68	57.855	ENSHGLG00100008507	LRRC47	99	56.608	Heterocephalus_glaber_male
ENSCSEG00000006217	lrrc47	98	72.456	ENSHCOG00000006348	lrrc47	99	72.807	Hippocampus_comes
ENSCSEG00000006217	lrrc47	95	53.299	ENSSTOG00000027559	LRRC47	99	52.356	Ictidomys_tridecemlineatus
ENSCSEG00000006217	lrrc47	95	53.578	ENSJJAG00000017474	Lrrc47	96	52.705	Jaculus_jaculus
ENSCSEG00000006217	lrrc47	96	77.996	ENSKMAG00000003414	lrrc47	100	77.996	Kryptolebias_marmoratus
ENSCSEG00000006217	lrrc47	96	53.012	ENSLAFG00000011657	LRRC47	98	52.182	Loxodonta_africana
ENSCSEG00000006217	lrrc47	95	40.104	ENSMFAG00000045730	LRRC47	88	54.430	Macaca_fascicularis
ENSCSEG00000006217	lrrc47	95	53.565	ENSMNEG00000042488	LRRC47	98	52.174	Macaca_nemestrina
ENSCSEG00000006217	lrrc47	74	55.705	ENSMLEG00000043735	LRRC47	90	54.139	Mandrillus_leucophaeus
ENSCSEG00000006217	lrrc47	95	54.035	ENSMAUG00000021337	Lrrc47	97	53.043	Mesocricetus_auratus
ENSCSEG00000006217	lrrc47	95	52.439	ENSMICG00000026816	LRRC47	99	52.348	Microcebus_murinus
ENSCSEG00000006217	lrrc47	95	54.049	ENSMOCG00000021279	Lrrc47	99	53.697	Microtus_ochrogaster
ENSCSEG00000006217	lrrc47	96	74.286	ENSMMOG00000017007	lrrc47	100	76.429	Mola_mola
ENSCSEG00000006217	lrrc47	95	51.754	ENSMODG00000006554	LRRC47	98	50.877	Monodelphis_domestica
ENSCSEG00000006217	lrrc47	95	53.472	MGP_CAROLIEiJ_G0026864	Lrrc47	99	53.012	Mus_caroli
ENSCSEG00000006217	lrrc47	95	53.497	ENSMUSG00000029028	Lrrc47	99	53.012	Mus_musculus
ENSCSEG00000006217	lrrc47	95	52.972	MGP_PahariEiJ_G0029212	Lrrc47	99	52.668	Mus_pahari
ENSCSEG00000006217	lrrc47	95	53.322	MGP_SPRETEiJ_G0027857	Lrrc47	99	52.921	Mus_spretus
ENSCSEG00000006217	lrrc47	64	58.947	ENSMPUG00000007321	LRRC47	75	58.684	Mustela_putorius_furo
ENSCSEG00000006217	lrrc47	95	53.427	ENSNGAG00000022153	Lrrc47	98	53.684	Nannospalax_galili
ENSCSEG00000006217	lrrc47	95	52.182	ENSNLEG00000008131	LRRC47	99	50.960	Nomascus_leucogenys
ENSCSEG00000006217	lrrc47	81	53.086	ENSODEG00000010882	LRRC47	93	52.263	Octodon_degus
ENSCSEG00000006217	lrrc47	93	74.074	ENSORLG00000002532	lrrc47	100	74.074	Oryzias_latipes
ENSCSEG00000006217	lrrc47	96	73.703	ENSORLG00020019601	lrrc47	100	73.703	Oryzias_latipes_hni
ENSCSEG00000006217	lrrc47	96	73.345	ENSORLG00015014040	lrrc47	100	73.345	Oryzias_latipes_hsok
ENSCSEG00000006217	lrrc47	96	73.882	ENSOMEG00000008989	lrrc47	100	73.882	Oryzias_melastigma
ENSCSEG00000006217	lrrc47	95	52.696	ENSOGAG00000001553	LRRC47	99	51.652	Otolemur_garnettii
ENSCSEG00000006217	lrrc47	95	50.697	ENSOARG00000015290	LRRC47	98	50.174	Ovis_aries
ENSCSEG00000006217	lrrc47	71	57.377	ENSPPAG00000036370	-	98	56.206	Pan_paniscus
ENSCSEG00000006217	lrrc47	95	51.568	ENSPPRG00000005261	LRRC47	98	51.742	Panthera_pardus
ENSCSEG00000006217	lrrc47	95	53.217	ENSPTRG00000000068	LRRC47	99	52.000	Pan_troglodytes
ENSCSEG00000006217	lrrc47	95	53.565	ENSPANG00000012437	LRRC47	99	52.348	Papio_anubis
ENSCSEG00000006217	lrrc47	64	61.538	ENSPSIG00000004196	LRRC47	99	60.743	Pelodiscus_sinensis
ENSCSEG00000006217	lrrc47	64	60.106	ENSPEMG00000021068	Lrrc47	99	60.054	Peromyscus_maniculatus_bairdii
ENSCSEG00000006217	lrrc47	95	53.968	ENSPCIG00000003638	LRRC47	98	53.603	Phascolarctos_cinereus
ENSCSEG00000006217	lrrc47	91	73.674	ENSPFOG00000000992	lrrc47	94	74.194	Poecilia_formosa
ENSCSEG00000006217	lrrc47	96	74.061	ENSPLAG00000008077	lrrc47	100	74.552	Poecilia_latipinna
ENSCSEG00000006217	lrrc47	96	74.597	ENSPMEG00000007367	lrrc47	100	74.286	Poecilia_mexicana
ENSCSEG00000006217	lrrc47	95	53.391	ENSPPYG00000001960	LRRC47	99	52.174	Pongo_abelii
ENSCSEG00000006217	lrrc47	95	52.962	ENSPCOG00000019161	LRRC47	98	52.696	Propithecus_coquereli
ENSCSEG00000006217	lrrc47	95	53.240	ENSPVAG00000009839	LRRC47	99	52.539	Pteropus_vampyrus
ENSCSEG00000006217	lrrc47	95	63.262	ENSPNAG00000017982	lrrc47	98	63.196	Pygocentrus_nattereri
ENSCSEG00000006217	lrrc47	97	52.931	ENSRNOG00000024796	Lrrc47	99	52.759	Rattus_norvegicus
ENSCSEG00000006217	lrrc47	95	53.565	ENSRBIG00000019437	LRRC47	99	52.348	Rhinopithecus_bieti
ENSCSEG00000006217	lrrc47	95	53.565	ENSRROG00000043182	LRRC47	99	52.348	Rhinopithecus_roxellana
ENSCSEG00000006217	lrrc47	76	56.195	ENSSBOG00000026334	LRRC47	92	55.088	Saimiri_boliviensis_boliviensis
ENSCSEG00000006217	lrrc47	95	48.342	ENSSHAG00000007360	LRRC47	98	47.652	Sarcophilus_harrisii
ENSCSEG00000006217	lrrc47	96	78.214	ENSSMAG00000009344	lrrc47	100	78.214	Scophthalmus_maximus
ENSCSEG00000006217	lrrc47	96	80.322	ENSSDUG00000014618	lrrc47	100	80.322	Seriola_dumerili
ENSCSEG00000006217	lrrc47	96	80.501	ENSSLDG00000018908	lrrc47	100	80.501	Seriola_lalandi_dorsalis
ENSCSEG00000006217	lrrc47	95	52.151	ENSSPUG00000010277	LRRC47	99	52.203	Sphenodon_punctatus
ENSCSEG00000006217	lrrc47	96	79.249	ENSSPAG00000005188	lrrc47	100	79.249	Stegastes_partitus
ENSCSEG00000006217	lrrc47	97	51.979	ENSSSCG00000039516	LRRC47	98	51.652	Sus_scrofa
ENSCSEG00000006217	lrrc47	69	60.152	ENSTGUG00000002737	LRRC47	98	59.645	Taeniopygia_guttata
ENSCSEG00000006217	lrrc47	96	73.345	ENSTRUG00000017696	lrrc47	100	73.250	Takifugu_rubripes
ENSCSEG00000006217	lrrc47	96	70.536	ENSTNIG00000010923	lrrc47	99	70.662	Tetraodon_nigroviridis
ENSCSEG00000006217	lrrc47	95	51.478	ENSTTRG00000011751	LRRC47	99	51.646	Tursiops_truncatus
ENSCSEG00000006217	lrrc47	84	53.740	ENSUAMG00000012080	LRRC47	96	53.740	Ursus_americanus
ENSCSEG00000006217	lrrc47	64	59.682	ENSUMAG00000010781	LRRC47	80	58.355	Ursus_maritimus
ENSCSEG00000006217	lrrc47	97	49.915	ENSVVUG00000027118	LRRC47	99	49.060	Vulpes_vulpes
ENSCSEG00000006217	lrrc47	96	57.118	ENSXETG00000006029	lrrc47	99	56.766	Xenopus_tropicalis
ENSCSEG00000006217	lrrc47	96	74.640	ENSXCOG00000002813	lrrc47	99	74.368	Xiphophorus_couchianus
ENSCSEG00000006217	lrrc47	96	73.741	ENSXMAG00000019386	lrrc47	100	74.595	Xiphophorus_maculatus