EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006255 (Gene tree)
Gene ID: 103393313
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC103393313
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5004 bases
Position: chr17:12146707-12151710
Accession: 103393313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009745	tRNA-synt_2	PF00152.20	7.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000009859	-	4746	XM_008330231	ENSCSEP00000009745	1581 (aa)	XP_008328453	UPI0004967BDC

Gene Model

Click here to download ENSCSEG00000006255's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006255	si:ch211-256m1.8	100	74.479	ENSAPOG00000007012	si:ch211-256m1.8	100	74.479	Acanthochromis_polyacanthus
ENSCSEG00000006255	si:ch211-256m1.8	100	74.668	ENSAOCG00000012258	si:ch211-256m1.8	100	74.668	Amphiprion_ocellaris
ENSCSEG00000006255	si:ch211-256m1.8	100	74.605	ENSAPEG00000002724	si:ch211-256m1.8	100	74.605	Amphiprion_percula
ENSCSEG00000006255	si:ch211-256m1.8	100	77.701	ENSATEG00000006278	si:ch211-256m1.8	100	77.701	Anabas_testudineus
ENSCSEG00000006255	si:ch211-256m1.8	100	76.374	ENSACLG00000011503	si:ch211-256m1.8	100	76.374	Astatotilapia_calliptera
ENSCSEG00000006255	si:ch211-256m1.8	100	67.544	ENSAMXG00000038245	si:ch211-256m1.8	100	67.544	Astyanax_mexicanus
ENSCSEG00000006255	si:ch211-256m1.8	100	72.205	ENSCVAG00000003376	si:ch211-256m1.8	100	72.205	Cyprinodon_variegatus
ENSCSEG00000006255	si:ch211-256m1.8	100	65.448	ENSDARG00000055172	si:ch211-256m1.8	100	65.574	Danio_rerio
ENSCSEG00000006255	si:ch211-256m1.8	100	68.817	ENSELUG00000010546	si:ch211-256m1.8	100	68.817	Esox_lucius
ENSCSEG00000006255	si:ch211-256m1.8	100	72.159	ENSFHEG00000005847	si:ch211-256m1.8	100	72.159	Fundulus_heteroclitus
ENSCSEG00000006255	si:ch211-256m1.8	100	73.065	ENSGAFG00000010269	si:ch211-256m1.8	100	73.065	Gambusia_affinis
ENSCSEG00000006255	si:ch211-256m1.8	100	76.500	ENSHBUG00000014407	si:ch211-256m1.8	100	76.500	Haplochromis_burtoni
ENSCSEG00000006255	si:ch211-256m1.8	100	70.518	ENSHCOG00000006884	si:ch211-256m1.8	99	71.956	Hippocampus_comes
ENSCSEG00000006255	si:ch211-256m1.8	100	66.079	ENSIPUG00000022659	si:ch211-256m1.8	100	66.079	Ictalurus_punctatus
ENSCSEG00000006255	si:ch211-256m1.8	100	73.468	ENSKMAG00000016377	si:ch211-256m1.8	100	73.468	Kryptolebias_marmoratus
ENSCSEG00000006255	si:ch211-256m1.8	100	76.248	ENSLBEG00000010639	si:ch211-256m1.8	100	76.248	Labrus_bergylta
ENSCSEG00000006255	si:ch211-256m1.8	100	59.774	ENSLOCG00000011127	si:ch211-256m1.8	100	59.774	Lepisosteus_oculatus
ENSCSEG00000006255	si:ch211-256m1.8	99	74.810	ENSMAMG00000005651	si:ch211-256m1.8	99	74.810	Mastacembelus_armatus
ENSCSEG00000006255	si:ch211-256m1.8	100	76.311	ENSMZEG00005006924	si:ch211-256m1.8	100	76.311	Maylandia_zebra
ENSCSEG00000006255	si:ch211-256m1.8	100	71.059	ENSMMOG00000001736	si:ch211-256m1.8	100	71.059	Mola_mola
ENSCSEG00000006255	si:ch211-256m1.8	100	76.184	ENSNBRG00000005143	si:ch211-256m1.8	100	76.184	Neolamprologus_brichardi
ENSCSEG00000006255	si:ch211-256m1.8	100	70.518	ENSORLG00000022248	si:ch211-256m1.8	100	70.518	Oryzias_latipes
ENSCSEG00000006255	si:ch211-256m1.8	100	70.265	ENSORLG00020000214	si:ch211-256m1.8	100	70.265	Oryzias_latipes_hni
ENSCSEG00000006255	si:ch211-256m1.8	100	70.120	ENSORLG00015020297	si:ch211-256m1.8	100	70.266	Oryzias_latipes_hsok
ENSCSEG00000006255	si:ch211-256m1.8	100	70.625	ENSOMEG00000004519	si:ch211-256m1.8	100	70.986	Oryzias_melastigma
ENSCSEG00000006255	si:ch211-256m1.8	95	67.208	ENSPKIG00000007399	si:ch211-256m1.8	99	67.208	Paramormyrops_kingsleyae
ENSCSEG00000006255	si:ch211-256m1.8	100	66.014	ENSPMGG00000007698	si:ch211-256m1.8	100	66.077	Periophthalmus_magnuspinnatus
ENSCSEG00000006255	si:ch211-256m1.8	100	73.664	ENSPFOG00000005178	si:ch211-256m1.8	100	73.664	Poecilia_formosa
ENSCSEG00000006255	si:ch211-256m1.8	100	73.602	ENSPLAG00000006872	si:ch211-256m1.8	100	73.602	Poecilia_latipinna
ENSCSEG00000006255	si:ch211-256m1.8	100	73.602	ENSPMEG00000021815	si:ch211-256m1.8	100	73.602	Poecilia_mexicana
ENSCSEG00000006255	si:ch211-256m1.8	100	73.191	ENSPREG00000018669	si:ch211-256m1.8	100	73.191	Poecilia_reticulata
ENSCSEG00000006255	si:ch211-256m1.8	100	76.311	ENSPNYG00000018038	si:ch211-256m1.8	100	76.311	Pundamilia_nyererei
ENSCSEG00000006255	si:ch211-256m1.8	99	65.996	ENSPNAG00000018965	-	99	65.996	Pygocentrus_nattereri
ENSCSEG00000006255	si:ch211-256m1.8	99	67.043	ENSPNAG00000003552	si:ch211-256m1.8	99	67.043	Pygocentrus_nattereri
ENSCSEG00000006255	si:ch211-256m1.8	100	63.625	ENSSFOG00015008344	si:ch211-256m1.8	100	63.940	Scleropages_formosus
ENSCSEG00000006255	si:ch211-256m1.8	100	81.554	ENSSMAG00000007562	si:ch211-256m1.8	100	81.554	Scophthalmus_maximus
ENSCSEG00000006255	si:ch211-256m1.8	100	80.291	ENSSDUG00000018180	si:ch211-256m1.8	100	80.291	Seriola_dumerili
ENSCSEG00000006255	si:ch211-256m1.8	100	80.417	ENSSLDG00000020310	si:ch211-256m1.8	100	80.417	Seriola_lalandi_dorsalis
ENSCSEG00000006255	si:ch211-256m1.8	100	74.984	ENSSPAG00000013419	si:ch211-256m1.8	100	74.984	Stegastes_partitus
ENSCSEG00000006255	si:ch211-256m1.8	100	66.877	ENSTRUG00000023803	si:ch211-256m1.8	100	66.940	Takifugu_rubripes
ENSCSEG00000006255	si:ch211-256m1.8	100	73.568	ENSXCOG00000017726	si:ch211-256m1.8	100	73.568	Xiphophorus_couchianus
ENSCSEG00000006255	si:ch211-256m1.8	100	73.631	ENSXMAG00000026576	si:ch211-256m1.8	100	73.631	Xiphophorus_maculatus