EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006375 (Gene tree)
Gene ID: 103395646
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4824 bases
Position: chr19:16729028-16733851
Accession: 103395646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000009957	NCBP3	PF10309.9	8.2e-22	1	1
ENSCSEP00000009941	NCBP3	PF10309.9	9.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000010076	-	1842	-	ENSCSEP00000009957	613 (aa)	-	-
ENSCSET00000010060	-	2575	XM_008333407	ENSCSEP00000009941	681 (aa)	XP_008331629	UPI00049560DF

Gene Model

Click here to download ENSCSEG00000006375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006375	ncbp3	98	56.804	ENSG00000074356	NCBP3	99	56.347	Homo_sapiens
ENSCSEG00000006375	ncbp3	100	77.295	ENSAPOG00000020809	ncbp3	100	76.973	Acanthochromis_polyacanthus
ENSCSEG00000006375	ncbp3	98	54.914	ENSAMEG00000009372	NCBP3	99	53.659	Ailuropoda_melanoleuca
ENSCSEG00000006375	ncbp3	98	71.126	ENSACIG00000024257	ncbp3	100	71.704	Amphilophus_citrinellus
ENSCSEG00000006375	ncbp3	100	76.555	ENSAPEG00000020857	ncbp3	100	76.252	Amphiprion_percula
ENSCSEG00000006375	ncbp3	98	79.450	ENSATEG00000010801	ncbp3	100	78.662	Anabas_testudineus
ENSCSEG00000006375	ncbp3	90	55.442	ENSAPLG00000007373	NCBP3	99	56.122	Anas_platyrhynchos
ENSCSEG00000006375	ncbp3	92	56.102	ENSANAG00000024918	-	95	55.646	Aotus_nancymaae
ENSCSEG00000006375	ncbp3	81	46.990	ENSANAG00000020550	-	99	42.992	Aotus_nancymaae
ENSCSEG00000006375	ncbp3	100	72.771	ENSACLG00000000455	ncbp3	100	73.726	Astatotilapia_calliptera
ENSCSEG00000006375	ncbp3	99	60.857	ENSAMXG00000005968	ncbp3	99	62.358	Astyanax_mexicanus
ENSCSEG00000006375	ncbp3	98	55.040	ENSBTAG00000016621	NCBP3	99	56.583	Bos_taurus
ENSCSEG00000006375	ncbp3	97	55.556	ENSCAFG00000019371	NCBP3	95	55.305	Canis_familiaris
ENSCSEG00000006375	ncbp3	97	55.556	ENSCAFG00020008143	NCBP3	95	55.305	Canis_lupus_dingo
ENSCSEG00000006375	ncbp3	100	56.270	ENSCHIG00000009002	NCBP3	99	57.524	Capra_hircus
ENSCSEG00000006375	ncbp3	98	56.101	ENSTSYG00000008184	NCBP3	99	56.434	Carlito_syrichta
ENSCSEG00000006375	ncbp3	89	54.467	ENSCAPG00000016045	NCBP3	97	56.143	Cavia_aperea
ENSCSEG00000006375	ncbp3	98	56.487	ENSCPOG00000015529	NCBP3	99	55.969	Cavia_porcellus
ENSCSEG00000006375	ncbp3	98	57.052	ENSCCAG00000021154	NCBP3	99	56.744	Cebus_capucinus
ENSCSEG00000006375	ncbp3	97	55.502	ENSCATG00000013041	NCBP3	95	55.326	Cercocebus_atys
ENSCSEG00000006375	ncbp3	98	56.051	ENSCLAG00000012229	NCBP3	99	56.719	Chinchilla_lanigera
ENSCSEG00000006375	ncbp3	98	53.639	ENSCSAG00000013543	NCBP3	99	53.560	Chlorocebus_sabaeus
ENSCSEG00000006375	ncbp3	98	52.540	ENSCHOG00000012323	NCBP3	99	52.640	Choloepus_hoffmanni
ENSCSEG00000006375	ncbp3	100	55.259	ENSCPBG00000014824	NCBP3	99	56.920	Chrysemys_picta_bellii
ENSCSEG00000006375	ncbp3	98	55.122	ENSCANG00000033561	NCBP3	99	54.531	Colobus_angolensis_palliatus
ENSCSEG00000006375	ncbp3	98	55.732	ENSCGRG00001018538	Ncbp3	99	55.399	Cricetulus_griseus_chok1gshd
ENSCSEG00000006375	ncbp3	88	56.206	ENSCGRG00000015075	Ncbp3	99	55.652	Cricetulus_griseus_crigri
ENSCSEG00000006375	ncbp3	100	65.541	ENSCVAG00000020563	ncbp3	100	67.668	Cyprinodon_variegatus
ENSCSEG00000006375	ncbp3	99	62.216	ENSDARG00000044597	ncbp3	99	61.711	Danio_rerio
ENSCSEG00000006375	ncbp3	97	56.090	ENSDNOG00000006490	NCBP3	95	54.864	Dasypus_novemcinctus
ENSCSEG00000006375	ncbp3	100	55.937	ENSDORG00000010141	Ncbp3	99	55.296	Dipodomys_ordii
ENSCSEG00000006375	ncbp3	92	38.110	ENSEBUG00000004541	ncbp3	96	38.254	Eptatretus_burgeri
ENSCSEG00000006375	ncbp3	97	55.520	ENSEASG00005013399	NCBP3	95	56.410	Equus_asinus_asinus
ENSCSEG00000006375	ncbp3	97	55.520	ENSECAG00000008444	NCBP3	95	56.410	Equus_caballus
ENSCSEG00000006375	ncbp3	58	51.741	ENSEEUG00000008573	NCBP3	81	48.738	Erinaceus_europaeus
ENSCSEG00000006375	ncbp3	100	60.665	ENSELUG00000009182	ncbp3	99	61.134	Esox_lucius
ENSCSEG00000006375	ncbp3	98	57.280	ENSFCAG00000007929	NCBP3	99	57.277	Felis_catus
ENSCSEG00000006375	ncbp3	92	57.993	ENSFALG00000006704	NCBP3	99	58.291	Ficedula_albicollis
ENSCSEG00000006375	ncbp3	98	57.006	ENSFDAG00000013355	NCBP3	99	57.566	Fukomys_damarensis
ENSCSEG00000006375	ncbp3	99	62.283	ENSFHEG00000005607	ncbp3	100	63.284	Fundulus_heteroclitus
ENSCSEG00000006375	ncbp3	76	68.456	ENSGMOG00000001007	ncbp3	80	86.792	Gadus_morhua
ENSCSEG00000006375	ncbp3	100	55.503	ENSGALG00000002653	NCBP3	99	56.378	Gallus_gallus
ENSCSEG00000006375	ncbp3	81	74.067	ENSGAFG00000008912	ncbp3	79	75.047	Gambusia_affinis
ENSCSEG00000006375	ncbp3	100	68.025	ENSGACG00000020902	ncbp3	99	67.868	Gasterosteus_aculeatus
ENSCSEG00000006375	ncbp3	100	54.788	ENSGAGG00000014490	NCBP3	99	57.300	Gopherus_agassizii
ENSCSEG00000006375	ncbp3	98	56.735	ENSGGOG00000007496	NCBP3	99	56.279	Gorilla_gorilla
ENSCSEG00000006375	ncbp3	100	53.560	ENSHBUG00000019541	ncbp3	100	54.489	Haplochromis_burtoni
ENSCSEG00000006375	ncbp3	98	56.051	ENSHGLG00000015839	NCBP3	99	56.406	Heterocephalus_glaber_female
ENSCSEG00000006375	ncbp3	98	56.051	ENSHGLG00100007256	NCBP3	99	56.406	Heterocephalus_glaber_male
ENSCSEG00000006375	ncbp3	100	66.910	ENSHCOG00000004161	ncbp3	100	67.493	Hippocampus_comes
ENSCSEG00000006375	ncbp3	99	64.017	ENSIPUG00000024397	ncbp3	99	64.154	Ictalurus_punctatus
ENSCSEG00000006375	ncbp3	72	59.524	ENSSTOG00000002101	NCBP3	97	60.179	Ictidomys_tridecemlineatus
ENSCSEG00000006375	ncbp3	98	48.970	ENSJJAG00000000634	Ncbp3	99	49.065	Jaculus_jaculus
ENSCSEG00000006375	ncbp3	99	71.121	ENSKMAG00000001932	ncbp3	100	70.588	Kryptolebias_marmoratus
ENSCSEG00000006375	ncbp3	98	70.692	ENSLBEG00000006036	ncbp3	100	70.681	Labrus_bergylta
ENSCSEG00000006375	ncbp3	99	67.042	ENSLBEG00000001558	-	100	68.067	Labrus_bergylta
ENSCSEG00000006375	ncbp3	98	48.413	ENSLACG00000018791	NCBP3	99	50.549	Latimeria_chalumnae
ENSCSEG00000006375	ncbp3	99	60.204	ENSLOCG00000006706	ncbp3	99	59.492	Lepisosteus_oculatus
ENSCSEG00000006375	ncbp3	98	56.190	ENSLAFG00000002067	NCBP3	99	55.988	Loxodonta_africana
ENSCSEG00000006375	ncbp3	98	56.280	ENSMFAG00000024176	NCBP3	99	56.610	Macaca_fascicularis
ENSCSEG00000006375	ncbp3	98	56.280	ENSMMUG00000008556	NCBP3	99	56.610	Macaca_mulatta
ENSCSEG00000006375	ncbp3	97	55.360	ENSMNEG00000041374	NCBP3	95	55.662	Macaca_nemestrina
ENSCSEG00000006375	ncbp3	88	56.338	ENSMLEG00000034703	NCBP3	99	56.357	Mandrillus_leucophaeus
ENSCSEG00000006375	ncbp3	100	71.714	ENSMAMG00000022461	ncbp3	100	72.857	Mastacembelus_armatus
ENSCSEG00000006375	ncbp3	100	72.887	ENSMZEG00005027802	ncbp3	100	73.247	Maylandia_zebra
ENSCSEG00000006375	ncbp3	94	56.739	ENSMGAG00000004685	NCBP3	99	57.500	Meleagris_gallopavo
ENSCSEG00000006375	ncbp3	98	51.669	ENSMICG00000015798	NCBP3	99	52.484	Microcebus_murinus
ENSCSEG00000006375	ncbp3	98	55.892	ENSMOCG00000016446	Ncbp3	99	56.406	Microtus_ochrogaster
ENSCSEG00000006375	ncbp3	98	73.906	ENSMMOG00000012577	ncbp3	99	73.206	Mola_mola
ENSCSEG00000006375	ncbp3	98	70.342	ENSMALG00000009173	ncbp3	99	70.489	Monopterus_albus
ENSCSEG00000006375	ncbp3	98	56.646	MGP_CAROLIEiJ_G0016684	Ncbp3	99	57.524	Mus_caroli
ENSCSEG00000006375	ncbp3	98	56.646	ENSMUSG00000020783	Ncbp3	99	57.524	Mus_musculus
ENSCSEG00000006375	ncbp3	98	56.646	MGP_PahariEiJ_G0017817	Ncbp3	99	57.524	Mus_pahari
ENSCSEG00000006375	ncbp3	98	56.646	MGP_SPRETEiJ_G0017521	Ncbp3	99	57.524	Mus_spretus
ENSCSEG00000006375	ncbp3	97	55.556	ENSMPUG00000012357	NCBP3	95	55.305	Mustela_putorius_furo
ENSCSEG00000006375	ncbp3	98	56.480	ENSMLUG00000017060	NCBP3	99	56.897	Myotis_lucifugus
ENSCSEG00000006375	ncbp3	98	57.006	ENSNGAG00000020321	Ncbp3	99	57.722	Nannospalax_galili
ENSCSEG00000006375	ncbp3	100	53.909	ENSNBRG00000017354	ncbp3	95	69.883	Neolamprologus_brichardi
ENSCSEG00000006375	ncbp3	98	54.762	ENSNLEG00000017279	NCBP3	99	54.503	Nomascus_leucogenys
ENSCSEG00000006375	ncbp3	68	64.516	ENSMEUG00000015701	-	79	64.516	Notamacropus_eugenii
ENSCSEG00000006375	ncbp3	98	54.560	ENSOPRG00000016925	NCBP3	99	55.346	Ochotona_princeps
ENSCSEG00000006375	ncbp3	98	56.688	ENSODEG00000016617	NCBP3	99	57.254	Octodon_degus
ENSCSEG00000006375	ncbp3	100	70.126	ENSONIG00000007434	ncbp3	100	72.191	Oreochromis_niloticus
ENSCSEG00000006375	ncbp3	99	55.660	ENSOANG00000010109	NCBP3	99	56.918	Ornithorhynchus_anatinus
ENSCSEG00000006375	ncbp3	97	55.788	ENSOCUG00000008045	NCBP3	95	56.340	Oryctolagus_cuniculus
ENSCSEG00000006375	ncbp3	99	68.732	ENSORLG00000013703	ncbp3	100	67.970	Oryzias_latipes
ENSCSEG00000006375	ncbp3	99	67.552	ENSORLG00020011764	ncbp3	100	67.669	Oryzias_latipes_hni
ENSCSEG00000006375	ncbp3	99	67.994	ENSORLG00015018733	ncbp3	100	67.868	Oryzias_latipes_hsok
ENSCSEG00000006375	ncbp3	99	69.719	ENSOMEG00000017858	ncbp3	100	70.435	Oryzias_melastigma
ENSCSEG00000006375	ncbp3	98	55.696	ENSOGAG00000008803	NCBP3	99	56.347	Otolemur_garnettii
ENSCSEG00000006375	ncbp3	81	54.198	ENSOARG00000017750	NCBP3	99	55.725	Ovis_aries
ENSCSEG00000006375	ncbp3	98	57.120	ENSPPAG00000030530	NCBP3	99	56.502	Pan_paniscus
ENSCSEG00000006375	ncbp3	98	56.390	ENSPPRG00000022474	NCBP3	99	55.781	Panthera_pardus
ENSCSEG00000006375	ncbp3	90	56.098	ENSPTIG00000009607	NCBP3	92	55.442	Panthera_tigris_altaica
ENSCSEG00000006375	ncbp3	98	56.872	ENSPTRG00000008578	NCBP3	99	56.105	Pan_troglodytes
ENSCSEG00000006375	ncbp3	98	56.418	ENSPANG00000024364	NCBP3	99	56.279	Papio_anubis
ENSCSEG00000006375	ncbp3	57	59.466	ENSPKIG00000008466	ncbp3	99	54.184	Paramormyrops_kingsleyae
ENSCSEG00000006375	ncbp3	83	51.027	ENSPSIG00000013732	NCBP3	99	51.838	Pelodiscus_sinensis
ENSCSEG00000006375	ncbp3	99	60.615	ENSPMGG00000003344	ncbp3	99	60.122	Periophthalmus_magnuspinnatus
ENSCSEG00000006375	ncbp3	98	55.414	ENSPEMG00000007746	Ncbp3	99	55.937	Peromyscus_maniculatus_bairdii
ENSCSEG00000006375	ncbp3	100	56.288	ENSPCIG00000008605	NCBP3	99	55.789	Phascolarctos_cinereus
ENSCSEG00000006375	ncbp3	90	69.206	ENSPFOG00000000721	ncbp3	98	70.156	Poecilia_formosa
ENSCSEG00000006375	ncbp3	99	69.209	ENSPLAG00000015399	ncbp3	100	71.857	Poecilia_latipinna
ENSCSEG00000006375	ncbp3	99	70.333	ENSPMEG00000000896	ncbp3	100	71.184	Poecilia_mexicana
ENSCSEG00000006375	ncbp3	99	70.058	ENSPREG00000001681	ncbp3	100	70.118	Poecilia_reticulata
ENSCSEG00000006375	ncbp3	97	55.732	ENSPPYG00000007823	NCBP3	95	55.238	Pongo_abelii
ENSCSEG00000006375	ncbp3	100	51.719	ENSPCAG00000012614	NCBP3	99	52.113	Procavia_capensis
ENSCSEG00000006375	ncbp3	98	56.349	ENSPCOG00000016793	NCBP3	99	56.832	Propithecus_coquereli
ENSCSEG00000006375	ncbp3	97	51.774	ENSPVAG00000012746	NCBP3	99	51.899	Pteropus_vampyrus
ENSCSEG00000006375	ncbp3	100	67.424	ENSPNYG00000022677	ncbp3	100	68.571	Pundamilia_nyererei
ENSCSEG00000006375	ncbp3	99	63.165	ENSPNAG00000003219	ncbp3	99	63.585	Pygocentrus_nattereri
ENSCSEG00000006375	ncbp3	98	57.484	ENSRNOG00000018550	Ncbp3	99	57.746	Rattus_norvegicus
ENSCSEG00000006375	ncbp3	98	56.577	ENSRBIG00000033247	NCBP3	99	56.434	Rhinopithecus_bieti
ENSCSEG00000006375	ncbp3	98	56.577	ENSRROG00000043833	NCBP3	99	56.434	Rhinopithecus_roxellana
ENSCSEG00000006375	ncbp3	98	56.508	ENSSBOG00000023178	NCBP3	99	56.765	Saimiri_boliviensis_boliviensis
ENSCSEG00000006375	ncbp3	81	54.962	ENSSHAG00000003466	NCBP3	99	54.151	Sarcophilus_harrisii
ENSCSEG00000006375	ncbp3	100	59.177	ENSSFOG00015005808	ncbp3	99	59.177	Scleropages_formosus
ENSCSEG00000006375	ncbp3	99	71.304	ENSSMAG00000010917	ncbp3	100	72.365	Scophthalmus_maximus
ENSCSEG00000006375	ncbp3	100	76.442	ENSSDUG00000023402	ncbp3	100	75.680	Seriola_dumerili
ENSCSEG00000006375	ncbp3	100	62.053	ENSSLDG00000000742	ncbp3	100	63.396	Seriola_lalandi_dorsalis
ENSCSEG00000006375	ncbp3	85	67.391	ENSSARG00000006634	NCBP3	89	63.861	Sorex_araneus
ENSCSEG00000006375	ncbp3	100	55.660	ENSSPUG00000002240	NCBP3	99	54.961	Sphenodon_punctatus
ENSCSEG00000006375	ncbp3	100	74.468	ENSSPAG00000011223	ncbp3	100	75.212	Stegastes_partitus
ENSCSEG00000006375	ncbp3	98	57.006	ENSSSCG00000017870	NCBP3	99	57.566	Sus_scrofa
ENSCSEG00000006375	ncbp3	98	56.410	ENSTGUG00000005396	NCBP3	99	57.729	Taeniopygia_guttata
ENSCSEG00000006375	ncbp3	100	71.657	ENSTRUG00000003769	ncbp3	100	70.785	Takifugu_rubripes
ENSCSEG00000006375	ncbp3	100	67.994	ENSTNIG00000004776	ncbp3	100	68.462	Tetraodon_nigroviridis
ENSCSEG00000006375	ncbp3	98	51.987	ENSTBEG00000006308	NCBP3	99	51.633	Tupaia_belangeri
ENSCSEG00000006375	ncbp3	85	67.391	ENSTTRG00000005845	NCBP3	86	68.478	Tursiops_truncatus
ENSCSEG00000006375	ncbp3	98	54.914	ENSUAMG00000014043	NCBP3	99	54.740	Ursus_americanus
ENSCSEG00000006375	ncbp3	88	57.500	ENSUMAG00000007519	NCBP3	98	56.719	Ursus_maritimus
ENSCSEG00000006375	ncbp3	97	52.090	ENSVVUG00000026079	NCBP3	95	51.442	Vulpes_vulpes
ENSCSEG00000006375	ncbp3	100	48.777	ENSXETG00000012965	ncbp3	99	49.311	Xenopus_tropicalis
ENSCSEG00000006375	ncbp3	91	80.905	ENSXCOG00000018393	ncbp3	100	80.905	Xiphophorus_couchianus
ENSCSEG00000006375	ncbp3	99	69.706	ENSXMAG00000006849	ncbp3	100	72.046	Xiphophorus_maculatus