EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006583 (Gene tree)
Gene ID: 103383758
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6785 bases
Position: chr9:8947484-8954268
Accession: 103383758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000010268	Fip1	PF05182.13	1.2e-24	1	1
ENSCSEP00000010254	Fip1	PF05182.13	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000010390	-	2393	-	ENSCSEP00000010268	535 (aa)	XP_024914048	UPI000D628C87
ENSCSET00000010376	-	2441	XM_008317040	ENSCSEP00000010254	551 (aa)	XP_008315262	UPI0004955AD8

Gene Model

Click here to download ENSCSEG00000006583's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006583	fip1l1b	71	91.667	ENSACIG00000001454	fip1l1b	96	91.667	Amphilophus_citrinellus
ENSCSEG00000006583	fip1l1b	100	88.372	ENSAOCG00000021043	fip1l1b	100	88.372	Amphiprion_ocellaris
ENSCSEG00000006583	fip1l1b	100	88.372	ENSAPEG00000022229	fip1l1b	100	88.372	Amphiprion_percula
ENSCSEG00000006583	fip1l1b	100	90.538	ENSATEG00000021757	fip1l1b	100	90.538	Anabas_testudineus
ENSCSEG00000006583	fip1l1b	89	54.662	ENSAPLG00000003042	-	90	56.725	Anas_platyrhynchos
ENSCSEG00000006583	fip1l1b	70	49.796	ENSAPLG00000008548	-	50	48.496	Anas_platyrhynchos
ENSCSEG00000006583	fip1l1b	69	69.032	ENSACAG00000010556	-	89	55.722	Anolis_carolinensis
ENSCSEG00000006583	fip1l1b	100	91.280	ENSACLG00000010418	fip1l1b	100	91.280	Astatotilapia_calliptera
ENSCSEG00000006583	fip1l1b	52	46.071	ENSAMXG00000031045	fip1l1a	79	44.803	Astyanax_mexicanus
ENSCSEG00000006583	fip1l1b	58	67.988	ENSAMXG00000011126	fip1l1b	89	72.759	Astyanax_mexicanus
ENSCSEG00000006583	fip1l1b	83	64.693	ENSBTAG00000020653	FIP1L1	99	61.609	Bos_taurus
ENSCSEG00000006583	fip1l1b	83	61.506	ENSCHIG00000025903	-	99	59.051	Capra_hircus
ENSCSEG00000006583	fip1l1b	83	53.965	ENSCAPG00000009569	-	77	68.000	Cavia_aperea
ENSCSEG00000006583	fip1l1b	83	64.317	ENSCPOG00000010770	-	85	65.265	Cavia_porcellus
ENSCSEG00000006583	fip1l1b	99	62.791	ENSCPBG00000025019	-	97	60.289	Chrysemys_picta_bellii
ENSCSEG00000006583	fip1l1b	99	58.273	ENSCGRG00001018568	Fip1l1	99	58.781	Cricetulus_griseus_chok1gshd
ENSCSEG00000006583	fip1l1b	99	58.273	ENSCGRG00000000208	Fip1l1	99	58.781	Cricetulus_griseus_crigri
ENSCSEG00000006583	fip1l1b	100	86.347	ENSCVAG00000023435	fip1l1b	100	86.347	Cyprinodon_variegatus
ENSCSEG00000006583	fip1l1b	100	41.075	ENSDARG00000043328	fip1l1a	50	43.333	Danio_rerio
ENSCSEG00000006583	fip1l1b	100	68.151	ENSDARG00000070431	fip1l1b	100	69.416	Danio_rerio
ENSCSEG00000006583	fip1l1b	64	60.759	ENSETEG00000018271	-	89	53.106	Echinops_telfairi
ENSCSEG00000006583	fip1l1b	83	61.894	ENSEASG00005019566	-	99	58.532	Equus_asinus_asinus
ENSCSEG00000006583	fip1l1b	55	53.602	ENSEEUG00000004965	-	59	55.072	Erinaceus_europaeus
ENSCSEG00000006583	fip1l1b	99	51.471	ENSELUG00000004607	fip1l1a	99	53.860	Esox_lucius
ENSCSEG00000006583	fip1l1b	68	73.423	ENSELUG00000001280	fip1l1b	80	70.996	Esox_lucius
ENSCSEG00000006583	fip1l1b	100	86.545	ENSFHEG00000003843	fip1l1b	100	86.545	Fundulus_heteroclitus
ENSCSEG00000006583	fip1l1b	100	70.650	ENSGMOG00000004913	fip1l1b	100	69.844	Gadus_morhua
ENSCSEG00000006583	fip1l1b	99	60.329	ENSGALG00000013943	-	99	61.243	Gallus_gallus
ENSCSEG00000006583	fip1l1b	100	85.379	ENSGAFG00000008253	fip1l1b	100	85.379	Gambusia_affinis
ENSCSEG00000006583	fip1l1b	100	72.667	ENSGACG00000015946	fip1l1b	100	72.833	Gasterosteus_aculeatus
ENSCSEG00000006583	fip1l1b	99	62.791	ENSGAGG00000009763	-	97	60.289	Gopherus_agassizii
ENSCSEG00000006583	fip1l1b	50	50.859	ENSGAGG00000017677	-	55	59.223	Gopherus_agassizii
ENSCSEG00000006583	fip1l1b	100	91.280	ENSHBUG00000013978	fip1l1b	100	91.280	Haplochromis_burtoni
ENSCSEG00000006583	fip1l1b	99	82.721	ENSHCOG00000015834	fip1l1b	99	84.007	Hippocampus_comes
ENSCSEG00000006583	fip1l1b	100	57.193	ENSIPUG00000022454	fip1l1b	98	69.841	Ictalurus_punctatus
ENSCSEG00000006583	fip1l1b	100	84.317	ENSKMAG00000021938	fip1l1b	100	84.317	Kryptolebias_marmoratus
ENSCSEG00000006583	fip1l1b	100	84.821	ENSLBEG00000028819	fip1l1b	100	85.000	Labrus_bergylta
ENSCSEG00000006583	fip1l1b	96	62.167	ENSLACG00000011991	fip1l1a	96	62.782	Latimeria_chalumnae
ENSCSEG00000006583	fip1l1b	99	64.594	ENSLOCG00000014127	fip1l1b	99	65.972	Lepisosteus_oculatus
ENSCSEG00000006583	fip1l1b	100	89.444	ENSMAMG00000004535	fip1l1b	100	89.444	Mastacembelus_armatus
ENSCSEG00000006583	fip1l1b	100	91.280	ENSMZEG00005023828	fip1l1b	100	91.280	Maylandia_zebra
ENSCSEG00000006583	fip1l1b	99	55.556	ENSMAUG00000010526	Fip1l1	99	55.614	Mesocricetus_auratus
ENSCSEG00000006583	fip1l1b	99	55.877	ENSMOCG00000008020	Fip1l1	99	56.962	Microtus_ochrogaster
ENSCSEG00000006583	fip1l1b	77	74.201	ENSMMOG00000008262	fip1l1b	92	96.154	Mola_mola
ENSCSEG00000006583	fip1l1b	61	54.642	ENSMODG00000020654	-	93	52.157	Monodelphis_domestica
ENSCSEG00000006583	fip1l1b	100	67.086	ENSMALG00000000838	fip1l1b	91	73.936	Monopterus_albus
ENSCSEG00000006583	fip1l1b	83	63.158	MGP_CAROLIEiJ_G0027304	Fip1l1	99	58.951	Mus_caroli
ENSCSEG00000006583	fip1l1b	83	63.158	ENSMUSG00000029227	Fip1l1	99	58.951	Mus_musculus
ENSCSEG00000006583	fip1l1b	83	63.158	MGP_PahariEiJ_G0017085	Fip1l1	99	58.951	Mus_pahari
ENSCSEG00000006583	fip1l1b	83	63.158	MGP_SPRETEiJ_G0028299	Fip1l1	99	58.951	Mus_spretus
ENSCSEG00000006583	fip1l1b	83	64.097	ENSNGAG00000008849	Fip1l1	99	59.206	Nannospalax_galili
ENSCSEG00000006583	fip1l1b	100	88.909	ENSNBRG00000017832	fip1l1b	100	88.909	Neolamprologus_brichardi
ENSCSEG00000006583	fip1l1b	100	88.551	ENSONIG00000008785	fip1l1b	100	88.551	Oreochromis_niloticus
ENSCSEG00000006583	fip1l1b	83	50.478	ENSOANG00000003384	-	90	49.811	Ornithorhynchus_anatinus
ENSCSEG00000006583	fip1l1b	100	86.137	ENSORLG00000004397	fip1l1b	100	86.137	Oryzias_latipes
ENSCSEG00000006583	fip1l1b	100	85.952	ENSORLG00020008716	fip1l1b	100	85.952	Oryzias_latipes_hni
ENSCSEG00000006583	fip1l1b	100	85.952	ENSORLG00015006736	fip1l1b	100	85.952	Oryzias_latipes_hsok
ENSCSEG00000006583	fip1l1b	100	59.325	ENSOMEG00000015730	fip1l1b	97	84.270	Oryzias_melastigma
ENSCSEG00000006583	fip1l1b	83	59.205	ENSOARG00000018767	-	86	60.294	Ovis_aries
ENSCSEG00000006583	fip1l1b	52	47.059	ENSPKIG00000014162	-	97	43.649	Paramormyrops_kingsleyae
ENSCSEG00000006583	fip1l1b	100	71.199	ENSPMGG00000017028	fip1l1b	100	70.141	Periophthalmus_magnuspinnatus
ENSCSEG00000006583	fip1l1b	99	57.754	ENSPEMG00000002025	Fip1l1	99	58.813	Peromyscus_maniculatus_bairdii
ENSCSEG00000006583	fip1l1b	53	54.313	ENSPCIG00000019318	-	97	54.952	Phascolarctos_cinereus
ENSCSEG00000006583	fip1l1b	100	84.964	ENSPFOG00000014745	fip1l1b	100	84.964	Poecilia_formosa
ENSCSEG00000006583	fip1l1b	100	82.098	ENSPLAG00000010954	fip1l1b	100	84.991	Poecilia_latipinna
ENSCSEG00000006583	fip1l1b	100	85.145	ENSPMEG00000019187	fip1l1b	100	85.145	Poecilia_mexicana
ENSCSEG00000006583	fip1l1b	83	69.595	ENSPREG00000012535	fip1l1b	90	69.595	Poecilia_reticulata
ENSCSEG00000006583	fip1l1b	58	86.335	ENSPNYG00000015976	fip1l1b	99	87.632	Pundamilia_nyererei
ENSCSEG00000006583	fip1l1b	62	43.402	ENSPNAG00000009853	fip1l1a	59	51.659	Pygocentrus_nattereri
ENSCSEG00000006583	fip1l1b	58	69.184	ENSPNAG00000015341	fip1l1b	71	69.325	Pygocentrus_nattereri
ENSCSEG00000006583	fip1l1b	98	37.931	ENSPNAG00000007456	-	54	41.424	Pygocentrus_nattereri
ENSCSEG00000006583	fip1l1b	83	60.746	ENSRNOG00000002275	Fip1l1	99	57.324	Rattus_norvegicus
ENSCSEG00000006583	fip1l1b	83	54.795	ENSSHAG00000015789	-	86	56.582	Sarcophilus_harrisii
ENSCSEG00000006583	fip1l1b	54	48.515	ENSSFOG00015010948	-	75	48.630	Scleropages_formosus
ENSCSEG00000006583	fip1l1b	100	89.796	ENSSMAG00000013444	fip1l1b	100	89.610	Scophthalmus_maximus
ENSCSEG00000006583	fip1l1b	100	91.837	ENSSDUG00000004117	fip1l1b	100	91.837	Seriola_dumerili
ENSCSEG00000006583	fip1l1b	100	91.280	ENSSLDG00000024099	fip1l1b	100	91.095	Seriola_lalandi_dorsalis
ENSCSEG00000006583	fip1l1b	87	58.115	ENSSARG00000001973	-	89	60.209	Sorex_araneus
ENSCSEG00000006583	fip1l1b	55	55.631	ENSSPUG00000017328	-	96	52.560	Sphenodon_punctatus
ENSCSEG00000006583	fip1l1b	100	88.730	ENSSPAG00000017564	fip1l1b	100	88.730	Stegastes_partitus
ENSCSEG00000006583	fip1l1b	100	82.841	ENSTRUG00000001545	fip1l1b	100	83.210	Takifugu_rubripes
ENSCSEG00000006583	fip1l1b	100	75.421	ENSTNIG00000004104	fip1l1b	100	75.589	Tetraodon_nigroviridis
ENSCSEG00000006583	fip1l1b	83	58.910	ENSUMAG00000002758	-	95	55.311	Ursus_maritimus
ENSCSEG00000006583	fip1l1b	70	58.115	ENSVPAG00000011574	-	76	60.209	Vicugna_pacos
ENSCSEG00000006583	fip1l1b	83	63.462	ENSXETG00000011679	fip1l1	92	57.371	Xenopus_tropicalis
ENSCSEG00000006583	fip1l1b	100	67.283	ENSXCOG00000013656	fip1l1b	63	80.851	Xiphophorus_couchianus
ENSCSEG00000006583	fip1l1b	100	85.870	ENSXMAG00000017620	fip1l1b	100	85.870	Xiphophorus_maculatus