EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006604 (Gene tree)
Gene ID: 103399099
Gene Symbol: -
Alias: -
Full Name: splicing factor U2AF 65 kDa subunit-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 1181 bases
Position: chrKI934753.1:21-1201
Accession: 103399099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000010291	RRM_1	PF00076.22	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000010413	-	1075	XM_008337843	ENSCSEP00000010291	102 (aa)	XP_008336065	UPI0007DCB2A3

Gene Model

Click here to download ENSCSEG00000006604's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006604	-	98	64.000	WBGene00006697	uaf-1	70	64.000	Caenorhabditis_elegans
ENSCSEG00000006604	-	99	69.307	ENSEBUG00000006012	-	71	69.307	Eptatretus_burgeri
ENSCSEG00000006604	-	100	94.118	ENSFHEG00000015338	-	70	94.118	Fundulus_heteroclitus
ENSCSEG00000006604	-	98	77.000	ENSHCOG00000007327	-	68	77.000	Hippocampus_comes
ENSCSEG00000006604	-	100	92.157	ENSKMAG00000006095	-	70	92.157	Kryptolebias_marmoratus
ENSCSEG00000006604	-	100	93.137	ENSLBEG00000010685	-	70	93.137	Labrus_bergylta
ENSCSEG00000006604	-	100	95.098	ENSMALG00000019795	-	70	95.098	Monopterus_albus
ENSCSEG00000006604	-	100	93.137	ENSPREG00000013036	-	70	93.137	Poecilia_reticulata
ENSCSEG00000006604	-	100	90.196	ENSTRUG00000006885	-	70	90.196	Takifugu_rubripes