EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000006663 (Gene tree)
Gene ID: 103394515
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5733 bases
Position: chr18:12062078-12067810
Accession: 103394515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000010391	RRM_1	PF00076.22	4.4e-26	1	2
ENSCSEP00000010391	RRM_1	PF00076.22	4.4e-26	2	2
ENSCSEP00000010405	RRM_1	PF00076.22	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000010530	-	759	-	ENSCSEP00000010405	252 (aa)	-	-
ENSCSET00000010517	-	1884	XM_008331857	ENSCSEP00000010391	309 (aa)	XP_008330079	UPI0004955B49

Gene Model

Click here to download ENSCSEG00000006663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000006663	trnau1apa	59	32.275	ENSCSEG00000014166	-	50	31.551
ENSCSEG00000006663	trnau1apa	72	30.000	ENSCSEG00000000130	pabpc4	59	30.000
ENSCSEG00000006663	trnau1apa	98	40.407	ENSCSEG00000018215	trnau1apb	98	40.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006663	trnau1apa	95	56.954	ENSG00000180098	TRNAU1AP	98	58.333	Homo_sapiens
ENSCSEG00000006663	trnau1apa	90	89.706	ENSAPOG00000007148	TRNAU1AP	100	76.190	Acanthochromis_polyacanthus
ENSCSEG00000006663	trnau1apa	95	57.947	ENSAMEG00000011367	TRNAU1AP	98	57.807	Ailuropoda_melanoleuca
ENSCSEG00000006663	trnau1apa	92	88.298	ENSACIG00000004161	trnau1apa	93	93.258	Amphilophus_citrinellus
ENSCSEG00000006663	trnau1apa	100	75.080	ENSAOCG00000008056	trnau1apa	100	76.997	Amphiprion_ocellaris
ENSCSEG00000006663	trnau1apa	90	89.706	ENSAPEG00000008868	trnau1apa	100	76.997	Amphiprion_percula
ENSCSEG00000006663	trnau1apa	100	78.997	ENSATEG00000012140	trnau1apa	100	78.683	Anabas_testudineus
ENSCSEG00000006663	trnau1apa	92	57.388	ENSAPLG00000002606	TRNAU1AP	98	57.586	Anas_platyrhynchos
ENSCSEG00000006663	trnau1apa	94	46.000	ENSACAG00000003995	-	97	47.000	Anolis_carolinensis
ENSCSEG00000006663	trnau1apa	71	36.161	ENSACAG00000004205	-	78	34.821	Anolis_carolinensis
ENSCSEG00000006663	trnau1apa	94	58.607	ENSANAG00000018976	TRNAU1AP	98	58.333	Aotus_nancymaae
ENSCSEG00000006663	trnau1apa	100	75.962	ENSACLG00000018515	trnau1apa	100	75.641	Astatotilapia_calliptera
ENSCSEG00000006663	trnau1apa	95	68.478	ENSAMXG00000029240	-	100	71.591	Astyanax_mexicanus
ENSCSEG00000006663	trnau1apa	99	54.516	ENSAMXG00000013750	trnau1apa	97	54.369	Astyanax_mexicanus
ENSCSEG00000006663	trnau1apa	95	56.623	ENSBTAG00000010393	TRNAU1AP	98	58.000	Bos_taurus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCJAG00000009717	TRNAU1AP	87	71.233	Callithrix_jacchus
ENSCSEG00000006663	trnau1apa	95	56.954	ENSCAFG00000011735	TRNAU1AP	98	58.333	Canis_familiaris
ENSCSEG00000006663	trnau1apa	95	56.954	ENSCAFG00020023584	TRNAU1AP	98	58.333	Canis_lupus_dingo
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCHIG00000023215	TRNAU1AP	98	58.000	Capra_hircus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSTSYG00000003506	TRNAU1AP	87	71.233	Carlito_syrichta
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCPOG00000001925	TRNAU1AP	98	58.333	Cavia_porcellus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCCAG00000037506	TRNAU1AP	87	71.233	Cebus_capucinus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCATG00000044617	TRNAU1AP	87	71.233	Cercocebus_atys
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCLAG00000008223	TRNAU1AP	98	58.333	Chinchilla_lanigera
ENSCSEG00000006663	trnau1apa	95	56.954	ENSCSAG00000001014	TRNAU1AP	98	58.333	Chlorocebus_sabaeus
ENSCSEG00000006663	trnau1apa	92	57.639	ENSCPBG00000000121	TRNAU1AP	98	57.491	Chrysemys_picta_bellii
ENSCSEG00000006663	trnau1apa	68	34.375	ENSCSAVG00000011781	-	86	47.853	Ciona_savignyi
ENSCSEG00000006663	trnau1apa	95	48.344	ENSCANG00000041949	TRNAU1AP	97	51.042	Colobus_angolensis_palliatus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCGRG00001004713	Trnau1ap	98	58.333	Cricetulus_griseus_chok1gshd
ENSCSEG00000006663	trnau1apa	94	58.607	ENSCGRG00000014532	Trnau1ap	98	58.333	Cricetulus_griseus_crigri
ENSCSEG00000006663	trnau1apa	99	73.163	ENSCVAG00000018069	trnau1apa	99	87.805	Cyprinodon_variegatus
ENSCSEG00000006663	trnau1apa	99	49.026	ENSDARG00000101323	trnau1apa	95	47.134	Danio_rerio
ENSCSEG00000006663	trnau1apa	95	56.954	ENSDNOG00000033009	TRNAU1AP	98	58.333	Dasypus_novemcinctus
ENSCSEG00000006663	trnau1apa	62	57.513	ENSDNOG00000047959	-	96	57.513	Dasypus_novemcinctus
ENSCSEG00000006663	trnau1apa	95	54.362	ENSDORG00000006349	Trnau1ap	97	54.882	Dipodomys_ordii
ENSCSEG00000006663	trnau1apa	92	36.728	FBgn0031607	CG15440	95	35.000	Drosophila_melanogaster
ENSCSEG00000006663	trnau1apa	82	53.668	ENSETEG00000012594	TRNAU1AP	97	55.253	Echinops_telfairi
ENSCSEG00000006663	trnau1apa	60	44.318	ENSEBUG00000006349	-	59	44.318	Eptatretus_burgeri
ENSCSEG00000006663	trnau1apa	94	58.607	ENSEASG00005010062	TRNAU1AP	90	71.233	Equus_asinus_asinus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSECAG00000012980	TRNAU1AP	90	71.233	Equus_caballus
ENSCSEG00000006663	trnau1apa	100	69.304	ENSELUG00000017686	trnau1apa	100	68.471	Esox_lucius
ENSCSEG00000006663	trnau1apa	92	78.261	ENSELUG00000022790	-	93	78.261	Esox_lucius
ENSCSEG00000006663	trnau1apa	95	56.954	ENSFCAG00000013401	TRNAU1AP	98	58.333	Felis_catus
ENSCSEG00000006663	trnau1apa	92	56.357	ENSFALG00000001371	TRNAU1AP	98	57.093	Ficedula_albicollis
ENSCSEG00000006663	trnau1apa	94	58.607	ENSFDAG00000018599	TRNAU1AP	98	58.333	Fukomys_damarensis
ENSCSEG00000006663	trnau1apa	78	78.000	ENSFHEG00000018232	trnau1apa	85	75.862	Fundulus_heteroclitus
ENSCSEG00000006663	trnau1apa	100	61.465	ENSGMOG00000016508	trnau1apa	99	62.461	Gadus_morhua
ENSCSEG00000006663	trnau1apa	64	41.872	ENSGALG00000012721	C2H6orf52	79	38.627	Gallus_gallus
ENSCSEG00000006663	trnau1apa	95	56.667	ENSGALG00000001310	-	98	56.667	Gallus_gallus
ENSCSEG00000006663	trnau1apa	80	74.699	ENSGAFG00000004928	trnau1apa	97	75.479	Gambusia_affinis
ENSCSEG00000006663	trnau1apa	100	75.556	ENSGACG00000001443	trnau1apa	100	76.115	Gasterosteus_aculeatus
ENSCSEG00000006663	trnau1apa	92	56.747	ENSGAGG00000004940	TRNAU1AP	98	56.401	Gopherus_agassizii
ENSCSEG00000006663	trnau1apa	94	58.607	ENSGGOG00000003511	TRNAU1AP	87	71.233	Gorilla_gorilla
ENSCSEG00000006663	trnau1apa	100	90.370	ENSHBUG00000002510	trnau1apa	100	74.448	Haplochromis_burtoni
ENSCSEG00000006663	trnau1apa	94	58.607	ENSHGLG00000010380	TRNAU1AP	98	58.333	Heterocephalus_glaber_female
ENSCSEG00000006663	trnau1apa	95	54.967	ENSHGLG00100012699	TRNAU1AP	98	56.333	Heterocephalus_glaber_male
ENSCSEG00000006663	trnau1apa	99	69.811	ENSHCOG00000014770	trnau1apa	99	66.772	Hippocampus_comes
ENSCSEG00000006663	trnau1apa	94	58.607	ENSSTOG00000000079	TRNAU1AP	98	58.333	Ictidomys_tridecemlineatus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSJJAG00000010128	Trnau1ap	98	57.000	Jaculus_jaculus
ENSCSEG00000006663	trnau1apa	99	88.889	ENSKMAG00000001230	trnau1apa	100	88.889	Kryptolebias_marmoratus
ENSCSEG00000006663	trnau1apa	100	74.608	ENSLBEG00000011683	trnau1apa	100	74.295	Labrus_bergylta
ENSCSEG00000006663	trnau1apa	96	49.505	ENSLACG00000005541	TRNAU1AP	98	49.669	Latimeria_chalumnae
ENSCSEG00000006663	trnau1apa	98	61.688	ENSLOCG00000004041	trnau1apa	99	59.804	Lepisosteus_oculatus
ENSCSEG00000006663	trnau1apa	95	57.285	ENSLAFG00000007628	TRNAU1AP	98	58.667	Loxodonta_africana
ENSCSEG00000006663	trnau1apa	95	71.852	ENSMFAG00000043751	TRNAU1AP	87	71.233	Macaca_fascicularis
ENSCSEG00000006663	trnau1apa	94	58.607	ENSMMUG00000006561	TRNAU1AP	98	58.333	Macaca_mulatta
ENSCSEG00000006663	trnau1apa	95	71.852	ENSMNEG00000044201	TRNAU1AP	87	71.233	Macaca_nemestrina
ENSCSEG00000006663	trnau1apa	95	71.852	ENSMLEG00000015649	TRNAU1AP	87	71.233	Mandrillus_leucophaeus
ENSCSEG00000006663	trnau1apa	90	90.441	ENSMAMG00000001247	trnau1apa	99	91.791	Mastacembelus_armatus
ENSCSEG00000006663	trnau1apa	100	75.962	ENSMZEG00005017722	trnau1apa	100	75.641	Maylandia_zebra
ENSCSEG00000006663	trnau1apa	93	55.932	ENSMGAG00000002105	TRNAU1AP	98	56.655	Meleagris_gallopavo
ENSCSEG00000006663	trnau1apa	94	58.607	ENSMICG00000008386	TRNAU1AP	87	71.233	Microcebus_murinus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSMOCG00000011189	Trnau1ap	98	58.333	Microtus_ochrogaster
ENSCSEG00000006663	trnau1apa	100	67.302	ENSMMOG00000012107	trnau1apa	99	66.879	Mola_mola
ENSCSEG00000006663	trnau1apa	95	58.609	ENSMODG00000010927	TRNAU1AP	98	56.667	Monodelphis_domestica
ENSCSEG00000006663	trnau1apa	100	79.618	ENSMALG00000016778	trnau1apa	100	79.936	Monopterus_albus
ENSCSEG00000006663	trnau1apa	94	58.607	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	67.089	Mus_caroli
ENSCSEG00000006663	trnau1apa	94	58.607	ENSMUSG00000028898	Trnau1ap	92	67.089	Mus_musculus
ENSCSEG00000006663	trnau1apa	94	58.607	MGP_PahariEiJ_G0028896	Trnau1ap	93	67.089	Mus_pahari
ENSCSEG00000006663	trnau1apa	94	58.607	MGP_SPRETEiJ_G0027544	Trnau1ap	92	67.089	Mus_spretus
ENSCSEG00000006663	trnau1apa	95	56.954	ENSMPUG00000015511	TRNAU1AP	98	58.333	Mustela_putorius_furo
ENSCSEG00000006663	trnau1apa	95	56.954	ENSMLUG00000012586	TRNAU1AP	98	58.333	Myotis_lucifugus
ENSCSEG00000006663	trnau1apa	95	60.535	ENSNGAG00000015881	Trnau1ap	98	59.259	Nannospalax_galili
ENSCSEG00000006663	trnau1apa	100	66.984	ENSNBRG00000001758	trnau1apa	99	66.667	Neolamprologus_brichardi
ENSCSEG00000006663	trnau1apa	95	71.852	ENSNLEG00000009822	TRNAU1AP	87	71.233	Nomascus_leucogenys
ENSCSEG00000006663	trnau1apa	93	57.966	ENSMEUG00000006117	TRNAU1AP	98	55.973	Notamacropus_eugenii
ENSCSEG00000006663	trnau1apa	63	65.517	ENSOPRG00000007084	-	57	65.517	Ochotona_princeps
ENSCSEG00000006663	trnau1apa	94	58.607	ENSODEG00000002970	TRNAU1AP	98	58.333	Octodon_degus
ENSCSEG00000006663	trnau1apa	80	77.689	ENSONIG00000004715	trnau1apa	97	77.291	Oreochromis_niloticus
ENSCSEG00000006663	trnau1apa	98	46.926	ENSOANG00000005325	-	98	45.928	Ornithorhynchus_anatinus
ENSCSEG00000006663	trnau1apa	95	55.629	ENSOCUG00000011704	-	98	57.000	Oryctolagus_cuniculus
ENSCSEG00000006663	trnau1apa	95	51.000	ENSOCUG00000002353	-	98	50.667	Oryctolagus_cuniculus
ENSCSEG00000006663	trnau1apa	85	47.212	ENSOCUG00000006834	-	97	46.067	Oryctolagus_cuniculus
ENSCSEG00000006663	trnau1apa	100	73.482	ENSORLG00000010428	trnau1apa	100	71.975	Oryzias_latipes
ENSCSEG00000006663	trnau1apa	100	73.482	ENSORLG00020000926	trnau1ap	100	71.975	Oryzias_latipes_hni
ENSCSEG00000006663	trnau1apa	100	73.482	ENSORLG00015009858	trnau1ap	100	71.975	Oryzias_latipes_hsok
ENSCSEG00000006663	trnau1apa	100	73.482	ENSOMEG00000007873	trnau1apa	100	87.407	Oryzias_melastigma
ENSCSEG00000006663	trnau1apa	95	56.954	ENSOGAG00000002274	TRNAU1AP	98	58.333	Otolemur_garnettii
ENSCSEG00000006663	trnau1apa	95	56.623	ENSOARG00000002843	TRNAU1AP	98	58.000	Ovis_aries
ENSCSEG00000006663	trnau1apa	95	71.852	ENSPPAG00000033927	TRNAU1AP	87	71.233	Pan_paniscus
ENSCSEG00000006663	trnau1apa	95	56.954	ENSPPRG00000004416	TRNAU1AP	98	58.333	Panthera_pardus
ENSCSEG00000006663	trnau1apa	95	56.954	ENSPTIG00000016677	TRNAU1AP	98	58.333	Panthera_tigris_altaica
ENSCSEG00000006663	trnau1apa	88	52.747	ENSPTRG00000000434	-	93	52.555	Pan_troglodytes
ENSCSEG00000006663	trnau1apa	94	58.607	ENSPANG00000016019	TRNAU1AP	87	71.233	Papio_anubis
ENSCSEG00000006663	trnau1apa	93	78.261	ENSPKIG00000022205	-	95	78.261	Paramormyrops_kingsleyae
ENSCSEG00000006663	trnau1apa	94	60.678	ENSPKIG00000015511	trnau1apa	93	59.524	Paramormyrops_kingsleyae
ENSCSEG00000006663	trnau1apa	92	59.170	ENSPSIG00000006864	TRNAU1AP	98	56.747	Pelodiscus_sinensis
ENSCSEG00000006663	trnau1apa	97	68.543	ENSPMGG00000023893	trnau1apa	96	68.667	Periophthalmus_magnuspinnatus
ENSCSEG00000006663	trnau1apa	94	58.197	ENSPEMG00000007877	Trnau1ap	98	58.000	Peromyscus_maniculatus_bairdii
ENSCSEG00000006663	trnau1apa	72	49.107	ENSPMAG00000005934	trnau1apa	90	47.489	Petromyzon_marinus
ENSCSEG00000006663	trnau1apa	56	52.841	ENSPMAG00000000592	trnau1apa	97	52.841	Petromyzon_marinus
ENSCSEG00000006663	trnau1apa	89	88.148	ENSPFOG00000008100	trnau1apa	99	70.288	Poecilia_formosa
ENSCSEG00000006663	trnau1apa	85	87.805	ENSPLAG00000010236	trnau1apa	99	69.435	Poecilia_latipinna
ENSCSEG00000006663	trnau1apa	89	83.582	ENSPMEG00000016387	trnau1apa	97	68.269	Poecilia_mexicana
ENSCSEG00000006663	trnau1apa	89	77.895	ENSPREG00000019821	trnau1apa	96	80.000	Poecilia_reticulata
ENSCSEG00000006663	trnau1apa	83	57.209	ENSPPYG00000001639	-	94	54.751	Pongo_abelii
ENSCSEG00000006663	trnau1apa	92	54.430	ENSPCOG00000023470	-	98	54.852	Propithecus_coquereli
ENSCSEG00000006663	trnau1apa	95	56.954	ENSPCOG00000027712	-	98	58.333	Propithecus_coquereli
ENSCSEG00000006663	trnau1apa	95	56.954	ENSPVAG00000017214	TRNAU1AP	98	58.333	Pteropus_vampyrus
ENSCSEG00000006663	trnau1apa	100	74.763	ENSPNYG00000010130	trnau1apa	99	76.515	Pundamilia_nyererei
ENSCSEG00000006663	trnau1apa	99	52.104	ENSPNAG00000024905	trnau1apa	97	52.104	Pygocentrus_nattereri
ENSCSEG00000006663	trnau1apa	85	54.444	ENSRNOG00000055344	Trnau1ap	85	55.970	Rattus_norvegicus
ENSCSEG00000006663	trnau1apa	94	58.607	ENSRBIG00000029083	TRNAU1AP	87	71.233	Rhinopithecus_bieti
ENSCSEG00000006663	trnau1apa	94	58.607	ENSRROG00000029128	TRNAU1AP	87	71.233	Rhinopithecus_roxellana
ENSCSEG00000006663	trnau1apa	94	58.607	ENSSBOG00000021299	TRNAU1AP	87	71.233	Saimiri_boliviensis_boliviensis
ENSCSEG00000006663	trnau1apa	95	58.609	ENSSHAG00000008108	TRNAU1AP	98	56.667	Sarcophilus_harrisii
ENSCSEG00000006663	trnau1apa	100	75.399	ENSSMAG00000020851	trnau1apa	100	80.757	Scophthalmus_maximus
ENSCSEG00000006663	trnau1apa	100	76.730	ENSSDUG00000011734	trnau1apa	100	90.370	Seriola_dumerili
ENSCSEG00000006663	trnau1apa	100	72.481	ENSSLDG00000012101	trnau1apa	100	70.229	Seriola_lalandi_dorsalis
ENSCSEG00000006663	trnau1apa	93	56.949	ENSSARG00000007536	TRNAU1AP	98	58.362	Sorex_araneus
ENSCSEG00000006663	trnau1apa	59	52.151	ENSSPUG00000010415	-	95	47.849	Sphenodon_punctatus
ENSCSEG00000006663	trnau1apa	94	56.040	ENSSPUG00000010400	-	96	55.782	Sphenodon_punctatus
ENSCSEG00000006663	trnau1apa	100	75.159	ENSSPAG00000005029	trnau1apa	100	77.389	Stegastes_partitus
ENSCSEG00000006663	trnau1apa	95	56.954	ENSSSCG00000030284	TRNAU1AP	98	58.333	Sus_scrofa
ENSCSEG00000006663	trnau1apa	93	56.610	ENSTGUG00000000735	-	98	57.338	Taeniopygia_guttata
ENSCSEG00000006663	trnau1apa	64	42.211	ENSTGUG00000005908	-	94	41.500	Taeniopygia_guttata
ENSCSEG00000006663	trnau1apa	100	75.806	ENSTRUG00000003352	trnau1apa	100	73.548	Takifugu_rubripes
ENSCSEG00000006663	trnau1apa	90	90.370	ENSTNIG00000006129	trnau1apa	100	75.000	Tetraodon_nigroviridis
ENSCSEG00000006663	trnau1apa	81	51.751	ENSTBEG00000008049	-	96	51.765	Tupaia_belangeri
ENSCSEG00000006663	trnau1apa	95	56.954	ENSTTRG00000001854	TRNAU1AP	98	58.333	Tursiops_truncatus
ENSCSEG00000006663	trnau1apa	92	56.701	ENSUAMG00000008789	TRNAU1AP	98	58.131	Ursus_americanus
ENSCSEG00000006663	trnau1apa	95	56.954	ENSUMAG00000011068	TRNAU1AP	98	58.333	Ursus_maritimus
ENSCSEG00000006663	trnau1apa	96	50.325	ENSVPAG00000006778	TRNAU1AP	98	51.634	Vicugna_pacos
ENSCSEG00000006663	trnau1apa	95	56.333	ENSVVUG00000012518	TRNAU1AP	91	57.718	Vulpes_vulpes
ENSCSEG00000006663	trnau1apa	89	88.148	ENSXMAG00000017361	trnau1apa	99	70.927	Xiphophorus_maculatus