EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000006848 (Gene tree)
Gene ID: 103393349
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 815 bases
Position: chr17:12428876-12429690
Accession: 103393349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000010669	RNA_pol_Rpb6	PF01192.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000010798	-	384	XM_008330283	ENSCSEP00000010669	127 (aa)	XP_008328505	-

Gene Model

Click here to download ENSCSEG00000006848's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03020	RNA polymerase	KEGG
csem04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006848	polr2f	83	90.566	ENSG00000100142	POLR2F	87	90.566	Homo_sapiens
ENSCSEG00000006848	polr2f	95	98.347	ENSAPOG00000002902	polr2f	95	98.347	Acanthochromis_polyacanthus
ENSCSEG00000006848	polr2f	83	89.623	ENSAMEG00000010331	POLR2F	83	89.623	Ailuropoda_melanoleuca
ENSCSEG00000006848	polr2f	95	98.347	ENSACIG00000000923	polr2f	95	98.347	Amphilophus_citrinellus
ENSCSEG00000006848	polr2f	95	99.174	ENSAOCG00000003182	polr2f	95	99.174	Amphiprion_ocellaris
ENSCSEG00000006848	polr2f	95	99.174	ENSAPEG00000012999	polr2f	95	99.174	Amphiprion_percula
ENSCSEG00000006848	polr2f	95	98.347	ENSATEG00000008929	polr2f	95	98.347	Anabas_testudineus
ENSCSEG00000006848	polr2f	80	90.099	ENSAPLG00000015235	POLR2F	85	89.623	Anas_platyrhynchos
ENSCSEG00000006848	polr2f	83	91.509	ENSACAG00000015288	POLR2F	83	91.509	Anolis_carolinensis
ENSCSEG00000006848	polr2f	83	90.566	ENSANAG00000020840	POLR2F	87	90.566	Aotus_nancymaae
ENSCSEG00000006848	polr2f	95	97.521	ENSACLG00000016129	polr2f	95	97.521	Astatotilapia_calliptera
ENSCSEG00000006848	polr2f	95	97.521	ENSAMXG00000012812	polr2f	95	97.521	Astyanax_mexicanus
ENSCSEG00000006848	polr2f	83	90.566	ENSBTAG00000004820	POLR2F	83	90.566	Bos_taurus
ENSCSEG00000006848	polr2f	63	77.500	WBGene00007355	rpb-6	74	66.990	Caenorhabditis_elegans
ENSCSEG00000006848	polr2f	83	90.566	ENSCJAG00000048241	POLR2F	87	90.566	Callithrix_jacchus
ENSCSEG00000006848	polr2f	83	89.623	ENSCAFG00000001437	POLR2F	83	89.623	Canis_familiaris
ENSCSEG00000006848	polr2f	83	90.566	ENSCHIG00000012907	POLR2F	83	90.566	Capra_hircus
ENSCSEG00000006848	polr2f	83	89.623	ENSTSYG00000008187	POLR2F	83	89.623	Carlito_syrichta
ENSCSEG00000006848	polr2f	83	90.566	ENSCAPG00000013419	POLR2F	83	90.566	Cavia_aperea
ENSCSEG00000006848	polr2f	83	90.566	ENSCPOG00000034094	POLR2F	83	90.566	Cavia_porcellus
ENSCSEG00000006848	polr2f	83	90.566	ENSCCAG00000036489	POLR2F	83	90.566	Cebus_capucinus
ENSCSEG00000006848	polr2f	83	90.566	ENSCATG00000041014	POLR2F	87	90.566	Cercocebus_atys
ENSCSEG00000006848	polr2f	83	90.566	ENSCLAG00000017167	POLR2F	83	90.566	Chinchilla_lanigera
ENSCSEG00000006848	polr2f	83	90.566	ENSCSAG00000006862	POLR2F	83	90.566	Chlorocebus_sabaeus
ENSCSEG00000006848	polr2f	83	91.509	ENSCPBG00000023030	POLR2F	54	91.509	Chrysemys_picta_bellii
ENSCSEG00000006848	polr2f	81	76.923	ENSCING00000019359	-	73	76.923	Ciona_intestinalis
ENSCSEG00000006848	polr2f	83	90.566	ENSCANG00000041884	POLR2F	87	90.566	Colobus_angolensis_palliatus
ENSCSEG00000006848	polr2f	83	90.566	ENSCGRG00001023541	POLR2F	83	90.566	Cricetulus_griseus_chok1gshd
ENSCSEG00000006848	polr2f	83	90.566	ENSCGRG00000011921	POLR2F	83	90.566	Cricetulus_griseus_crigri
ENSCSEG00000006848	polr2f	95	97.521	ENSCVAG00000010437	polr2f	95	97.521	Cyprinodon_variegatus
ENSCSEG00000006848	polr2f	83	99.057	ENSDARG00000036625	polr2f	83	99.057	Danio_rerio
ENSCSEG00000006848	polr2f	83	90.566	ENSDNOG00000005884	POLR2F	83	90.566	Dasypus_novemcinctus
ENSCSEG00000006848	polr2f	83	90.566	ENSDORG00000024789	Polr2f	83	90.566	Dipodomys_ordii
ENSCSEG00000006848	polr2f	78	70.588	FBgn0003275	RpII18	78	72.549	Drosophila_melanogaster
ENSCSEG00000006848	polr2f	77	67.347	ENSEBUG00000002842	-	90	64.423	Eptatretus_burgeri
ENSCSEG00000006848	polr2f	56	81.690	ENSEBUG00000008509	polr2f	73	81.690	Eptatretus_burgeri
ENSCSEG00000006848	polr2f	60	88.158	ENSEASG00005018802	-	69	87.013	Equus_asinus_asinus
ENSCSEG00000006848	polr2f	83	87.736	ENSEEUG00000011014	POLR2F	83	87.736	Erinaceus_europaeus
ENSCSEG00000006848	polr2f	94	97.500	ENSELUG00000000319	polr2f	94	97.500	Esox_lucius
ENSCSEG00000006848	polr2f	83	89.623	ENSFCAG00000002806	POLR2F	87	89.623	Felis_catus
ENSCSEG00000006848	polr2f	83	90.566	ENSFDAG00000009926	POLR2F	83	90.566	Fukomys_damarensis
ENSCSEG00000006848	polr2f	88	98.214	ENSFHEG00000005448	polr2f	84	98.113	Fundulus_heteroclitus
ENSCSEG00000006848	polr2f	95	87.603	ENSGMOG00000009967	polr2f	83	88.679	Gadus_morhua
ENSCSEG00000006848	polr2f	83	91.509	ENSGALG00000012291	POLR2F	83	91.509	Gallus_gallus
ENSCSEG00000006848	polr2f	95	96.694	ENSGAFG00000017573	polr2f	95	96.694	Gambusia_affinis
ENSCSEG00000006848	polr2f	95	92.562	ENSGACG00000007322	polr2f	83	94.340	Gasterosteus_aculeatus
ENSCSEG00000006848	polr2f	83	91.509	ENSGAGG00000021757	POLR2F	83	91.509	Gopherus_agassizii
ENSCSEG00000006848	polr2f	83	90.566	ENSGGOG00000005213	POLR2F	87	90.566	Gorilla_gorilla
ENSCSEG00000006848	polr2f	95	97.521	ENSHBUG00000022089	polr2f	95	97.521	Haplochromis_burtoni
ENSCSEG00000006848	polr2f	83	90.566	ENSHGLG00000018942	POLR2F	83	90.566	Heterocephalus_glaber_female
ENSCSEG00000006848	polr2f	83	90.566	ENSHGLG00100012851	POLR2F	83	90.566	Heterocephalus_glaber_male
ENSCSEG00000006848	polr2f	83	93.396	ENSHCOG00000006149	polr2f	83	93.396	Hippocampus_comes
ENSCSEG00000006848	polr2f	76	98.969	ENSIPUG00000000814	polr2f	100	98.969	Ictalurus_punctatus
ENSCSEG00000006848	polr2f	83	90.566	ENSSTOG00000025722	POLR2F	83	90.566	Ictidomys_tridecemlineatus
ENSCSEG00000006848	polr2f	83	90.566	ENSJJAG00000008097	Polr2f	83	90.566	Jaculus_jaculus
ENSCSEG00000006848	polr2f	95	96.694	ENSKMAG00000014230	polr2f	95	96.694	Kryptolebias_marmoratus
ENSCSEG00000006848	polr2f	94	95.833	ENSLBEG00000008383	polr2f	100	95.833	Labrus_bergylta
ENSCSEG00000006848	polr2f	83	93.396	ENSLACG00000003931	POLR2F	83	93.396	Latimeria_chalumnae
ENSCSEG00000006848	polr2f	83	96.330	ENSLOCG00000011827	polr2f	84	96.330	Lepisosteus_oculatus
ENSCSEG00000006848	polr2f	83	90.566	ENSLAFG00000012632	POLR2F	83	90.566	Loxodonta_africana
ENSCSEG00000006848	polr2f	83	90.566	ENSMFAG00000033687	POLR2F	87	90.566	Macaca_fascicularis
ENSCSEG00000006848	polr2f	83	90.566	ENSMMUG00000038231	POLR2F	87	90.566	Macaca_mulatta
ENSCSEG00000006848	polr2f	83	90.566	ENSMNEG00000044365	POLR2F	87	90.566	Macaca_nemestrina
ENSCSEG00000006848	polr2f	83	90.566	ENSMLEG00000033077	POLR2F	87	90.566	Mandrillus_leucophaeus
ENSCSEG00000006848	polr2f	95	97.521	ENSMAMG00000008056	polr2f	95	97.521	Mastacembelus_armatus
ENSCSEG00000006848	polr2f	95	97.521	ENSMZEG00005005705	polr2f	95	97.521	Maylandia_zebra
ENSCSEG00000006848	polr2f	83	91.509	ENSMGAG00000012504	POLR2F	83	91.509	Meleagris_gallopavo
ENSCSEG00000006848	polr2f	83	90.566	ENSMAUG00000018586	Polr2f	83	90.566	Mesocricetus_auratus
ENSCSEG00000006848	polr2f	83	90.566	ENSMICG00000013128	POLR2F	87	90.566	Microcebus_murinus
ENSCSEG00000006848	polr2f	83	90.566	ENSMOCG00000000237	Polr2f	83	90.566	Microtus_ochrogaster
ENSCSEG00000006848	polr2f	95	99.174	ENSMMOG00000005106	polr2f	95	99.174	Mola_mola
ENSCSEG00000006848	polr2f	83	91.509	ENSMODG00000019063	POLR2F	83	91.509	Monodelphis_domestica
ENSCSEG00000006848	polr2f	95	98.347	ENSMALG00000001444	polr2f	95	98.347	Monopterus_albus
ENSCSEG00000006848	polr2f	83	89.623	MGP_CAROLIEiJ_G0020006	Polr2f	83	89.623	Mus_caroli
ENSCSEG00000006848	polr2f	83	89.623	ENSMUSG00000033020	Polr2f	83	89.623	Mus_musculus
ENSCSEG00000006848	polr2f	83	89.623	MGP_PahariEiJ_G0020008	Polr2f	83	89.623	Mus_pahari
ENSCSEG00000006848	polr2f	83	89.623	MGP_SPRETEiJ_G0020904	Polr2f	83	89.623	Mus_spretus
ENSCSEG00000006848	polr2f	83	89.623	ENSMPUG00000012997	POLR2F	83	89.623	Mustela_putorius_furo
ENSCSEG00000006848	polr2f	77	84.694	ENSMLUG00000029612	-	82	85.437	Myotis_lucifugus
ENSCSEG00000006848	polr2f	83	87.963	ENSMLUG00000014315	-	84	87.963	Myotis_lucifugus
ENSCSEG00000006848	polr2f	83	90.566	ENSNGAG00000020682	Polr2f	83	90.566	Nannospalax_galili
ENSCSEG00000006848	polr2f	95	98.347	ENSNBRG00000002492	polr2f	95	98.347	Neolamprologus_brichardi
ENSCSEG00000006848	polr2f	83	90.566	ENSNLEG00000014987	-	87	90.566	Nomascus_leucogenys
ENSCSEG00000006848	polr2f	83	90.566	ENSODEG00000014123	POLR2F	83	90.566	Octodon_degus
ENSCSEG00000006848	polr2f	95	98.347	ENSONIG00000008394	polr2f	95	98.347	Oreochromis_niloticus
ENSCSEG00000006848	polr2f	83	91.509	ENSOANG00000014684	POLR2F	83	91.509	Ornithorhynchus_anatinus
ENSCSEG00000006848	polr2f	83	90.566	ENSOCUG00000012064	POLR2F	83	90.566	Oryctolagus_cuniculus
ENSCSEG00000006848	polr2f	95	96.694	ENSORLG00000014580	polr2f	95	96.694	Oryzias_latipes
ENSCSEG00000006848	polr2f	95	97.521	ENSORLG00020006910	polr2f	95	97.521	Oryzias_latipes_hni
ENSCSEG00000006848	polr2f	75	97.895	ENSORLG00015015332	polr2f	63	97.849	Oryzias_latipes_hsok
ENSCSEG00000006848	polr2f	70	95.506	ENSOMEG00000006530	polr2f	57	88.660	Oryzias_melastigma
ENSCSEG00000006848	polr2f	83	90.566	ENSOGAG00000025463	POLR2F	83	90.566	Otolemur_garnettii
ENSCSEG00000006848	polr2f	83	90.566	ENSOARG00000014692	POLR2F	83	90.566	Ovis_aries
ENSCSEG00000006848	polr2f	83	90.566	ENSPPAG00000024276	POLR2F	87	90.566	Pan_paniscus
ENSCSEG00000006848	polr2f	83	89.623	ENSPPRG00000013030	POLR2F	87	89.623	Panthera_pardus
ENSCSEG00000006848	polr2f	82	89.423	ENSPTIG00000000632	POLR2F	85	89.423	Panthera_tigris_altaica
ENSCSEG00000006848	polr2f	83	90.566	ENSPTRG00000014356	POLR2F	87	90.566	Pan_troglodytes
ENSCSEG00000006848	polr2f	83	90.566	ENSPANG00000023979	POLR2F	87	90.566	Papio_anubis
ENSCSEG00000006848	polr2f	95	97.521	ENSPKIG00000002464	polr2f	95	97.521	Paramormyrops_kingsleyae
ENSCSEG00000006848	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSCSEG00000006848	polr2f	95	99.174	ENSPMGG00000009619	polr2f	95	99.174	Periophthalmus_magnuspinnatus
ENSCSEG00000006848	polr2f	83	90.566	ENSPEMG00000008322	Polr2f	83	90.566	Peromyscus_maniculatus_bairdii
ENSCSEG00000006848	polr2f	83	91.509	ENSPCIG00000012000	-	83	91.509	Phascolarctos_cinereus
ENSCSEG00000006848	polr2f	95	97.521	ENSPFOG00000000139	polr2f	95	97.521	Poecilia_formosa
ENSCSEG00000006848	polr2f	95	97.521	ENSPLAG00000000988	polr2f	95	97.521	Poecilia_latipinna
ENSCSEG00000006848	polr2f	95	97.521	ENSPMEG00000019063	polr2f	95	97.521	Poecilia_mexicana
ENSCSEG00000006848	polr2f	72	97.826	ENSPREG00000016749	polr2f	94	97.826	Poecilia_reticulata
ENSCSEG00000006848	polr2f	83	90.566	ENSPPYG00000011809	POLR2F	83	90.566	Pongo_abelii
ENSCSEG00000006848	polr2f	83	90.566	ENSPCOG00000025716	POLR2F	87	90.566	Propithecus_coquereli
ENSCSEG00000006848	polr2f	62	87.342	ENSPVAG00000010107	POLR2F	50	87.342	Pteropus_vampyrus
ENSCSEG00000006848	polr2f	95	97.521	ENSPNYG00000019790	polr2f	95	97.521	Pundamilia_nyererei
ENSCSEG00000006848	polr2f	95	98.347	ENSPNAG00000009017	polr2f	95	98.347	Pygocentrus_nattereri
ENSCSEG00000006848	polr2f	83	89.623	ENSRNOG00000011214	Polr2f	83	89.623	Rattus_norvegicus
ENSCSEG00000006848	polr2f	83	90.566	ENSRBIG00000044878	POLR2F	87	90.566	Rhinopithecus_bieti
ENSCSEG00000006848	polr2f	83	90.566	ENSRROG00000019586	POLR2F	87	90.566	Rhinopithecus_roxellana
ENSCSEG00000006848	polr2f	83	90.566	ENSSBOG00000023340	POLR2F	87	90.566	Saimiri_boliviensis_boliviensis
ENSCSEG00000006848	polr2f	83	91.509	ENSSHAG00000008502	POLR2F	83	91.509	Sarcophilus_harrisii
ENSCSEG00000006848	polr2f	95	96.694	ENSSFOG00015012810	polr2f	95	96.694	Scleropages_formosus
ENSCSEG00000006848	polr2f	95	98.347	ENSSMAG00000005354	polr2f	95	98.347	Scophthalmus_maximus
ENSCSEG00000006848	polr2f	95	99.174	ENSSDUG00000016273	polr2f	95	99.174	Seriola_dumerili
ENSCSEG00000006848	polr2f	95	99.174	ENSSLDG00000024895	polr2f	95	99.174	Seriola_lalandi_dorsalis
ENSCSEG00000006848	polr2f	83	91.509	ENSSPUG00000011343	POLR2F	83	91.509	Sphenodon_punctatus
ENSCSEG00000006848	polr2f	95	97.521	ENSSPAG00000019646	polr2f	95	97.521	Stegastes_partitus
ENSCSEG00000006848	polr2f	83	89.623	ENSSSCG00000000116	POLR2F	83	89.623	Sus_scrofa
ENSCSEG00000006848	polr2f	80	91.089	ENSTGUG00000010476	POLR2F	77	90.566	Taeniopygia_guttata
ENSCSEG00000006848	polr2f	57	90.278	ENSTGUG00000016504	-	88	89.610	Taeniopygia_guttata
ENSCSEG00000006848	polr2f	95	98.347	ENSTRUG00000021130	polr2f	68	98.347	Takifugu_rubripes
ENSCSEG00000006848	polr2f	95	98.347	ENSTNIG00000010827	polr2f	95	98.347	Tetraodon_nigroviridis
ENSCSEG00000006848	polr2f	62	87.342	ENSTTRG00000004817	POLR2F	50	87.342	Tursiops_truncatus
ENSCSEG00000006848	polr2f	83	89.623	ENSUAMG00000020504	POLR2F	83	89.623	Ursus_americanus
ENSCSEG00000006848	polr2f	83	89.623	ENSUMAG00000015052	POLR2F	83	89.623	Ursus_maritimus
ENSCSEG00000006848	polr2f	83	89.623	ENSVVUG00000024021	POLR2F	80	89.623	Vulpes_vulpes
ENSCSEG00000006848	polr2f	83	92.453	ENSXETG00000006346	polr2f	83	92.453	Xenopus_tropicalis
ENSCSEG00000006848	polr2f	95	97.521	ENSXCOG00000015983	polr2f	95	97.521	Xiphophorus_couchianus
ENSCSEG00000006848	polr2f	95	97.521	ENSXMAG00000001559	polr2f	95	97.521	Xiphophorus_maculatus