EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000006983 (Gene tree)
Gene ID: 103381434
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7769 bases
Position: chr8:1145266-1153034
Accession: 103381434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000010949	TUDOR	PF00567.24	5.4e-108	1	4
ENSCSEP00000010949	TUDOR	PF00567.24	5.4e-108	2	4
ENSCSEP00000010949	TUDOR	PF00567.24	5.4e-108	3	4
ENSCSEP00000010949	TUDOR	PF00567.24	5.4e-108	4	4
ENSCSEP00000010934	TUDOR	PF00567.24	7e-105	1	4
ENSCSEP00000010934	TUDOR	PF00567.24	7e-105	2	4
ENSCSEP00000010934	TUDOR	PF00567.24	7e-105	3	4
ENSCSEP00000010934	TUDOR	PF00567.24	7e-105	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000011063	-	3357	XM_008313767	ENSCSEP00000010934	1118 (aa)	XP_008311989	-
ENSCSET00000011079	-	3267	XM_008313761	ENSCSEP00000010949	1088 (aa)	XP_008311983	-

Gene Model

Click here to download ENSCSEG00000006983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000006983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000006983	tdrd1	78	30.097	ENSCSEG00000019023	tdrd6	69	30.097
ENSCSEG00000006983	tdrd1	82	36.364	ENSCSEG00000004884	si:dkeyp-93d12.1	64	32.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000006983	tdrd1	91	32.892	ENSG00000095627	TDRD1	84	34.156	Homo_sapiens
ENSCSEG00000006983	tdrd1	96	51.318	ENSAPOG00000023199	tdrd1	92	53.679	Acanthochromis_polyacanthus
ENSCSEG00000006983	tdrd1	98	31.288	ENSAMEG00000015182	TDRD1	84	34.225	Ailuropoda_melanoleuca
ENSCSEG00000006983	tdrd1	93	53.271	ENSACIG00000010576	tdrd1	91	54.215	Amphilophus_citrinellus
ENSCSEG00000006983	tdrd1	99	59.229	ENSAOCG00000007059	tdrd1	96	51.150	Amphiprion_ocellaris
ENSCSEG00000006983	tdrd1	92	54.790	ENSAPEG00000017049	tdrd1	90	53.728	Amphiprion_percula
ENSCSEG00000006983	tdrd1	96	53.723	ENSATEG00000021627	tdrd1	93	54.006	Anabas_testudineus
ENSCSEG00000006983	tdrd1	88	31.777	ENSAPLG00000012609	TDRD1	91	31.777	Anas_platyrhynchos
ENSCSEG00000006983	tdrd1	88	31.504	ENSACAG00000009854	TDRD1	77	31.504	Anolis_carolinensis
ENSCSEG00000006983	tdrd1	90	34.561	ENSANAG00000035710	TDRD1	84	32.234	Aotus_nancymaae
ENSCSEG00000006983	tdrd1	98	51.778	ENSACLG00000014107	tdrd1	92	51.317	Astatotilapia_calliptera
ENSCSEG00000006983	tdrd1	98	41.322	ENSAMXG00000015146	tdrd1	91	41.815	Astyanax_mexicanus
ENSCSEG00000006983	tdrd1	90	32.692	ENSBTAG00000006855	TDRD1	81	32.585	Bos_taurus
ENSCSEG00000006983	tdrd1	91	32.547	ENSCJAG00000019270	TDRD1	85	32.453	Callithrix_jacchus
ENSCSEG00000006983	tdrd1	90	31.464	ENSCAFG00000011266	TDRD1	85	32.859	Canis_familiaris
ENSCSEG00000006983	tdrd1	90	31.464	ENSCAFG00020012373	TDRD1	85	32.859	Canis_lupus_dingo
ENSCSEG00000006983	tdrd1	86	33.583	ENSCHIG00000012766	TDRD1	81	33.476	Capra_hircus
ENSCSEG00000006983	tdrd1	91	32.075	ENSTSYG00000004935	TDRD1	84	34.372	Carlito_syrichta
ENSCSEG00000006983	tdrd1	91	30.925	ENSCPOG00000004190	TDRD1	79	32.671	Cavia_porcellus
ENSCSEG00000006983	tdrd1	91	32.519	ENSCCAG00000027375	TDRD1	81	34.116	Cebus_capucinus
ENSCSEG00000006983	tdrd1	91	32.300	ENSCATG00000035999	TDRD1	82	33.807	Cercocebus_atys
ENSCSEG00000006983	tdrd1	87	34.372	ENSCLAG00000003935	TDRD1	80	34.372	Chinchilla_lanigera
ENSCSEG00000006983	tdrd1	91	32.264	ENSCSAG00000005071	TDRD1	80	33.538	Chlorocebus_sabaeus
ENSCSEG00000006983	tdrd1	85	43.704	ENSCHOG00000001690	TDRD1	74	42.553	Choloepus_hoffmanni
ENSCSEG00000006983	tdrd1	89	34.070	ENSCPBG00000003780	TDRD1	81	34.070	Chrysemys_picta_bellii
ENSCSEG00000006983	tdrd1	88	34.557	ENSCANG00000035172	TDRD1	80	34.052	Colobus_angolensis_palliatus
ENSCSEG00000006983	tdrd1	86	33.602	ENSCGRG00001004632	Tdrd1	83	33.602	Cricetulus_griseus_chok1gshd
ENSCSEG00000006983	tdrd1	91	33.113	ENSCGRG00000004981	Tdrd1	85	33.113	Cricetulus_griseus_crigri
ENSCSEG00000006983	tdrd1	97	49.095	ENSCVAG00000020980	tdrd1	94	49.843	Cyprinodon_variegatus
ENSCSEG00000006983	tdrd1	98	40.452	ENSDARG00000007465	tdrd1	90	41.033	Danio_rerio
ENSCSEG00000006983	tdrd1	85	33.761	ENSDNOG00000012114	TDRD1	76	33.868	Dasypus_novemcinctus
ENSCSEG00000006983	tdrd1	86	33.726	ENSDORG00000009986	Tdrd1	81	33.726	Dipodomys_ordii
ENSCSEG00000006983	tdrd1	80	33.681	ENSETEG00000020143	TDRD1	68	33.681	Echinops_telfairi
ENSCSEG00000006983	tdrd1	89	31.232	ENSEASG00005014802	TDRD1	87	31.232	Equus_asinus_asinus
ENSCSEG00000006983	tdrd1	87	41.667	ENSECAG00000009748	TDRD1	77	41.667	Equus_caballus
ENSCSEG00000006983	tdrd1	89	31.423	ENSEEUG00000010076	TDRD1	84	32.690	Erinaceus_europaeus
ENSCSEG00000006983	tdrd1	98	42.529	ENSELUG00000024364	tdrd1	92	42.440	Esox_lucius
ENSCSEG00000006983	tdrd1	98	30.476	ENSFCAG00000000632	TDRD1	86	32.122	Felis_catus
ENSCSEG00000006983	tdrd1	84	33.046	ENSFALG00000002237	TDRD1	89	33.539	Ficedula_albicollis
ENSCSEG00000006983	tdrd1	87	34.157	ENSFDAG00000013225	TDRD1	82	34.157	Fukomys_damarensis
ENSCSEG00000006983	tdrd1	96	39.523	ENSFHEG00000009203	tdrd1	94	38.662	Fundulus_heteroclitus
ENSCSEG00000006983	tdrd1	76	51.852	ENSGMOG00000016797	-	69	51.852	Gadus_morhua
ENSCSEG00000006983	tdrd1	99	46.452	ENSGAFG00000002668	tdrd1	88	47.902	Gambusia_affinis
ENSCSEG00000006983	tdrd1	87	55.423	ENSGACG00000006590	tdrd1	100	55.423	Gasterosteus_aculeatus
ENSCSEG00000006983	tdrd1	91	32.861	ENSGGOG00000004250	TDRD1	84	34.292	Gorilla_gorilla
ENSCSEG00000006983	tdrd1	98	52.372	ENSHBUG00000005216	tdrd1	91	53.143	Haplochromis_burtoni
ENSCSEG00000006983	tdrd1	85	32.541	ENSHGLG00000010877	TDRD1	85	32.541	Heterocephalus_glaber_female
ENSCSEG00000006983	tdrd1	85	34.162	ENSHGLG00100013857	TDRD1	84	34.162	Heterocephalus_glaber_male
ENSCSEG00000006983	tdrd1	91	44.585	ENSHCOG00000002840	tdrd1	89	42.490	Hippocampus_comes
ENSCSEG00000006983	tdrd1	98	41.268	ENSIPUG00000017232	tdrd1	95	42.378	Ictalurus_punctatus
ENSCSEG00000006983	tdrd1	91	33.694	ENSSTOG00000003221	TDRD1	84	33.692	Ictidomys_tridecemlineatus
ENSCSEG00000006983	tdrd1	85	35.269	ENSJJAG00000014720	Tdrd1	85	35.269	Jaculus_jaculus
ENSCSEG00000006983	tdrd1	91	51.530	ENSKMAG00000018558	tdrd1	91	52.544	Kryptolebias_marmoratus
ENSCSEG00000006983	tdrd1	97	54.922	ENSLBEG00000004161	tdrd1	91	54.488	Labrus_bergylta
ENSCSEG00000006983	tdrd1	90	33.432	ENSLACG00000011559	TDRD1	85	33.041	Latimeria_chalumnae
ENSCSEG00000006983	tdrd1	98	35.442	ENSLOCG00000012030	tdrd1	100	38.470	Lepisosteus_oculatus
ENSCSEG00000006983	tdrd1	84	32.775	ENSLAFG00000011575	TDRD1	92	35.142	Loxodonta_africana
ENSCSEG00000006983	tdrd1	91	32.264	ENSMFAG00000043487	TDRD1	80	33.776	Macaca_fascicularis
ENSCSEG00000006983	tdrd1	91	32.264	ENSMMUG00000022517	TDRD1	80	34.159	Macaca_mulatta
ENSCSEG00000006983	tdrd1	91	32.234	ENSMNEG00000031108	TDRD1	80	34.159	Macaca_nemestrina
ENSCSEG00000006983	tdrd1	91	32.139	ENSMLEG00000032281	TDRD1	80	33.639	Mandrillus_leucophaeus
ENSCSEG00000006983	tdrd1	92	55.816	ENSMAMG00000015287	tdrd1	94	54.939	Mastacembelus_armatus
ENSCSEG00000006983	tdrd1	98	52.102	ENSMZEG00005025315	tdrd1	92	51.639	Maylandia_zebra
ENSCSEG00000006983	tdrd1	90	30.380	ENSMGAG00000011067	TDRD1	98	30.872	Meleagris_gallopavo
ENSCSEG00000006983	tdrd1	78	35.336	ENSMAUG00000012164	Tdrd1	79	35.116	Mesocricetus_auratus
ENSCSEG00000006983	tdrd1	91	31.321	ENSMICG00000016190	TDRD1	85	33.193	Microcebus_murinus
ENSCSEG00000006983	tdrd1	91	33.235	ENSMOCG00000022360	Tdrd1	85	32.261	Microtus_ochrogaster
ENSCSEG00000006983	tdrd1	94	51.811	ENSMMOG00000014068	tdrd1	92	52.007	Mola_mola
ENSCSEG00000006983	tdrd1	87	32.959	ENSMODG00000009788	TDRD1	81	32.889	Monodelphis_domestica
ENSCSEG00000006983	tdrd1	99	54.972	ENSMALG00000022115	tdrd1	96	55.300	Monopterus_albus
ENSCSEG00000006983	tdrd1	91	32.816	MGP_CAROLIEiJ_G0023095	Tdrd1	85	33.200	Mus_caroli
ENSCSEG00000006983	tdrd1	91	32.749	ENSMUSG00000025081	Tdrd1	85	32.207	Mus_musculus
ENSCSEG00000006983	tdrd1	91	32.617	MGP_PahariEiJ_G0014583	Tdrd1	87	32.585	Mus_pahari
ENSCSEG00000006983	tdrd1	91	32.749	MGP_SPRETEiJ_G0024016	Tdrd1	85	33.133	Mus_spretus
ENSCSEG00000006983	tdrd1	85	32.684	ENSMPUG00000001987	TDRD1	79	34.708	Mustela_putorius_furo
ENSCSEG00000006983	tdrd1	91	31.031	ENSNGAG00000015231	Tdrd1	81	33.728	Nannospalax_galili
ENSCSEG00000006983	tdrd1	98	52.292	ENSNBRG00000017920	tdrd1	91	53.257	Neolamprologus_brichardi
ENSCSEG00000006983	tdrd1	88	44.604	ENSNLEG00000016228	TDRD1	81	44.604	Nomascus_leucogenys
ENSCSEG00000006983	tdrd1	89	30.473	ENSMEUG00000007717	TDRD1	84	31.417	Notamacropus_eugenii
ENSCSEG00000006983	tdrd1	88	33.797	ENSOPRG00000009180	TDRD1	81	33.797	Ochotona_princeps
ENSCSEG00000006983	tdrd1	86	34.084	ENSODEG00000011965	TDRD1	79	34.084	Octodon_degus
ENSCSEG00000006983	tdrd1	98	52.385	ENSONIG00000016382	tdrd1	92	53.378	Oreochromis_niloticus
ENSCSEG00000006983	tdrd1	88	32.891	ENSOANG00000001562	TDRD1	83	32.891	Ornithorhynchus_anatinus
ENSCSEG00000006983	tdrd1	89	31.775	ENSOCUG00000025327	TDRD1	82	34.154	Oryctolagus_cuniculus
ENSCSEG00000006983	tdrd1	97	47.173	ENSORLG00000004833	tdrd1	91	47.905	Oryzias_latipes
ENSCSEG00000006983	tdrd1	98	46.852	ENSORLG00020019231	tdrd1	96	47.563	Oryzias_latipes_hni
ENSCSEG00000006983	tdrd1	98	47.130	ENSORLG00015017184	tdrd1	91	47.710	Oryzias_latipes_hsok
ENSCSEG00000006983	tdrd1	98	45.752	ENSOMEG00000023637	tdrd1	88	48.445	Oryzias_melastigma
ENSCSEG00000006983	tdrd1	91	31.634	ENSOGAG00000001370	TDRD1	84	33.656	Otolemur_garnettii
ENSCSEG00000006983	tdrd1	91	31.034	ENSOARG00000014200	-	81	33.583	Ovis_aries
ENSCSEG00000006983	tdrd1	91	32.798	ENSPPAG00000041621	TDRD1	84	34.224	Pan_paniscus
ENSCSEG00000006983	tdrd1	98	30.563	ENSPPRG00000000191	TDRD1	86	32.220	Panthera_pardus
ENSCSEG00000006983	tdrd1	91	31.604	ENSPTIG00000010264	TDRD1	84	33.197	Panthera_tigris_altaica
ENSCSEG00000006983	tdrd1	91	32.798	ENSPTRG00000002958	TDRD1	84	34.224	Pan_troglodytes
ENSCSEG00000006983	tdrd1	91	32.075	ENSPANG00000020752	TDRD1	83	33.571	Papio_anubis
ENSCSEG00000006983	tdrd1	98	37.764	ENSPKIG00000010586	tdrd1	91	37.477	Paramormyrops_kingsleyae
ENSCSEG00000006983	tdrd1	89	33.766	ENSPSIG00000014655	TDRD1	84	32.826	Pelodiscus_sinensis
ENSCSEG00000006983	tdrd1	87	44.994	ENSPMGG00000018890	tdrd1	100	44.221	Periophthalmus_magnuspinnatus
ENSCSEG00000006983	tdrd1	91	33.209	ENSPEMG00000004582	Tdrd1	85	33.302	Peromyscus_maniculatus_bairdii
ENSCSEG00000006983	tdrd1	77	35.417	ENSPMAG00000004416	-	99	36.667	Petromyzon_marinus
ENSCSEG00000006983	tdrd1	87	33.056	ENSPCIG00000009739	TDRD1	84	32.821	Phascolarctos_cinereus
ENSCSEG00000006983	tdrd1	97	47.222	ENSPFOG00000002145	tdrd1	99	47.222	Poecilia_formosa
ENSCSEG00000006983	tdrd1	99	47.392	ENSPLAG00000010241	tdrd1	93	47.253	Poecilia_latipinna
ENSCSEG00000006983	tdrd1	99	46.438	ENSPMEG00000021893	tdrd1	88	48.043	Poecilia_mexicana
ENSCSEG00000006983	tdrd1	99	47.306	ENSPREG00000022663	tdrd1	93	47.306	Poecilia_reticulata
ENSCSEG00000006983	tdrd1	90	32.757	ENSPPYG00000002671	TDRD1	83	32.757	Pongo_abelii
ENSCSEG00000006983	tdrd1	87	31.561	ENSPCAG00000006692	TDRD1	70	31.561	Procavia_capensis
ENSCSEG00000006983	tdrd1	91	31.421	ENSPCOG00000026619	TDRD1	82	32.983	Propithecus_coquereli
ENSCSEG00000006983	tdrd1	88	30.739	ENSPVAG00000003055	TDRD1	80	31.391	Pteropus_vampyrus
ENSCSEG00000006983	tdrd1	98	51.676	ENSPNYG00000001706	tdrd1	91	52.676	Pundamilia_nyererei
ENSCSEG00000006983	tdrd1	97	41.292	ENSPNAG00000005831	tdrd1	93	41.893	Pygocentrus_nattereri
ENSCSEG00000006983	tdrd1	91	32.975	ENSRNOG00000017064	Tdrd1	85	33.266	Rattus_norvegicus
ENSCSEG00000006983	tdrd1	91	32.277	ENSRBIG00000029668	TDRD1	88	32.277	Rhinopithecus_bieti
ENSCSEG00000006983	tdrd1	98	30.796	ENSRROG00000043379	TDRD1	86	32.242	Rhinopithecus_roxellana
ENSCSEG00000006983	tdrd1	91	32.394	ENSSBOG00000023561	TDRD1	81	33.980	Saimiri_boliviensis_boliviensis
ENSCSEG00000006983	tdrd1	89	32.046	ENSSHAG00000014311	TDRD1	85	32.957	Sarcophilus_harrisii
ENSCSEG00000006983	tdrd1	93	38.395	ENSSFOG00015022020	tdrd1	92	38.900	Scleropages_formosus
ENSCSEG00000006983	tdrd1	93	57.644	ENSSMAG00000019271	tdrd1	92	56.764	Scophthalmus_maximus
ENSCSEG00000006983	tdrd1	90	59.211	ENSSDUG00000022012	tdrd1	95	56.645	Seriola_dumerili
ENSCSEG00000006983	tdrd1	93	55.680	ENSSLDG00000006423	tdrd1	96	56.173	Seriola_lalandi_dorsalis
ENSCSEG00000006983	tdrd1	86	39.098	ENSSARG00000008828	TDRD1	65	39.098	Sorex_araneus
ENSCSEG00000006983	tdrd1	91	31.625	ENSSPUG00000005015	TDRD1	82	32.222	Sphenodon_punctatus
ENSCSEG00000006983	tdrd1	94	54.000	ENSSPAG00000018805	tdrd1	90	55.039	Stegastes_partitus
ENSCSEG00000006983	tdrd1	89	31.464	ENSSSCG00000021075	TDRD1	80	33.690	Sus_scrofa
ENSCSEG00000006983	tdrd1	84	34.202	ENSTGUG00000010905	TDRD1	91	34.202	Taeniopygia_guttata
ENSCSEG00000006983	tdrd1	93	50.436	ENSTRUG00000012142	tdrd1	99	49.064	Takifugu_rubripes
ENSCSEG00000006983	tdrd1	84	48.462	ENSTNIG00000018898	tdrd1	100	41.183	Tetraodon_nigroviridis
ENSCSEG00000006983	tdrd1	91	32.227	ENSTBEG00000014417	-	84	32.773	Tupaia_belangeri
ENSCSEG00000006983	tdrd1	90	30.057	ENSTTRG00000010147	TDRD1	84	30.246	Tursiops_truncatus
ENSCSEG00000006983	tdrd1	98	31.189	ENSUAMG00000009025	TDRD1	86	32.927	Ursus_americanus
ENSCSEG00000006983	tdrd1	98	31.173	ENSUMAG00000000705	TDRD1	87	32.870	Ursus_maritimus
ENSCSEG00000006983	tdrd1	90	31.788	ENSVPAG00000004000	TDRD1	80	33.942	Vicugna_pacos
ENSCSEG00000006983	tdrd1	91	31.350	ENSVVUG00000009750	TDRD1	85	31.161	Vulpes_vulpes
ENSCSEG00000006983	tdrd1	84	50.946	ENSXCOG00000006412	tdrd1	94	52.083	Xiphophorus_couchianus
ENSCSEG00000006983	tdrd1	91	49.801	ENSXMAG00000008104	tdrd1	94	48.084	Xiphophorus_maculatus