EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000007121 (Gene tree)
Gene ID: 103376760
Gene Symbol: rab11ba
Alias: rab11b|wu:fb07g11|zgc:55760
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2588 bases
Position: chr2:18339377-18341964
Accession: 103376760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000011093	MMR_HSR1	PF01926.23	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000011226	-	777	XM_008307268	ENSCSEP00000011093	258 (aa)	XP_008305490	-

Gene Model

Click here to download ENSCSEG00000007121's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000007121	rab11ba	67	52.299	ENSCSEG00000016498	rab14	81	52.299
ENSCSEG00000007121	rab11ba	83	40.991	ENSCSEG00000010402	-	99	40.991
ENSCSEG00000007121	rab11ba	64	53.049	ENSCSEG00000020977	-	80	53.049
ENSCSEG00000007121	rab11ba	81	45.933	ENSCSEG00000018732	rab1ba	99	45.933
ENSCSEG00000007121	rab11ba	66	36.111	ENSCSEG00000020348	rab33ba	76	36.111
ENSCSEG00000007121	rab11ba	63	32.927	ENSCSEG00000018987	si:ch73-116o1.2	82	34.659
ENSCSEG00000007121	rab11ba	61	43.949	ENSCSEG00000019797	rab22a	81	43.949
ENSCSEG00000007121	rab11ba	70	35.676	ENSCSEG00000019183	si:dkey-34d22.5	83	35.676
ENSCSEG00000007121	rab11ba	66	40.909	ENSCSEG00000014467	rab9b	79	40.909
ENSCSEG00000007121	rab11ba	70	43.169	ENSCSEG00000010582	rab42a	84	43.169
ENSCSEG00000007121	rab11ba	64	43.636	ENSCSEG00000000205	RAB15	79	43.636
ENSCSEG00000007121	rab11ba	64	43.636	ENSCSEG00000003768	rab15	70	43.636
ENSCSEG00000007121	rab11ba	65	44.379	ENSCSEG00000011816	rab18a	82	44.379
ENSCSEG00000007121	rab11ba	64	34.731	ENSCSEG00000007927	hrasb	94	35.754
ENSCSEG00000007121	rab11ba	67	30.811	ENSCSEG00000000717	rasl11a	73	30.811
ENSCSEG00000007121	rab11ba	84	82.407	ENSCSEG00000011996	rab11al	99	82.407
ENSCSEG00000007121	rab11ba	63	30.675	ENSCSEG00000003537	rhebl1	88	30.675
ENSCSEG00000007121	rab11ba	64	50.000	ENSCSEG00000013400	rab35b	82	50.000
ENSCSEG00000007121	rab11ba	59	34.839	ENSCSEG00000005737	kras	87	35.928
ENSCSEG00000007121	rab11ba	66	46.199	ENSCSEG00000016803	rab18b	87	46.199
ENSCSEG00000007121	rab11ba	67	50.289	ENSCSEG00000014416	zgc:171927	81	50.289
ENSCSEG00000007121	rab11ba	68	34.463	ENSCSEG00000011820	rras	82	35.802
ENSCSEG00000007121	rab11ba	81	40.476	ENSCSEG00000007292	rab30	97	40.476
ENSCSEG00000007121	rab11ba	68	37.766	ENSCSEG00000016284	rab33a	67	37.766
ENSCSEG00000007121	rab11ba	61	36.943	ENSCSEG00000004941	rab41	74	36.943
ENSCSEG00000007121	rab11ba	60	40.994	ENSCSEG00000010116	rab9a	75	40.994
ENSCSEG00000007121	rab11ba	62	32.500	ENSCSEG00000016611	rheb	86	32.500
ENSCSEG00000007121	rab11ba	67	35.795	ENSCSEG00000005479	rabl2	75	35.795
ENSCSEG00000007121	rab11ba	81	31.100	ENSCSEG00000010565	rab23	82	34.320
ENSCSEG00000007121	rab11ba	66	54.971	ENSCSEG00000017211	rab2a	99	47.393
ENSCSEG00000007121	rab11ba	80	43.269	ENSCSEG00000019722	RAB39B	97	43.269
ENSCSEG00000007121	rab11ba	84	63.426	ENSCSEG00000017026	rab25a	99	63.426
ENSCSEG00000007121	rab11ba	84	40.278	ENSCSEG00000017024	rab5c	94	40.278
ENSCSEG00000007121	rab11ba	61	35.669	ENSCSEG00000016556	rab6bb	75	35.669
ENSCSEG00000007121	rab11ba	56	40.000	ENSCSEG00000014479	-	62	40.000
ENSCSEG00000007121	rab11ba	84	94.954	ENSCSEG00000007239	-	100	94.954
ENSCSEG00000007121	rab11ba	70	45.355	ENSCSEG00000017861	-	86	45.355
ENSCSEG00000007121	rab11ba	67	39.106	ENSCSEG00000002970	RAB7A	78	39.106
ENSCSEG00000007121	rab11ba	69	46.328	ENSCSEG00000002358	rab13	87	46.328
ENSCSEG00000007121	rab11ba	61	35.032	ENSCSEG00000003122	rab6ba	75	35.032
ENSCSEG00000007121	rab11ba	84	86.697	ENSCSEG00000007383	rab11a	100	86.697
ENSCSEG00000007121	rab11ba	67	40.110	ENSCSEG00000006243	zgc:101559	78	40.110
ENSCSEG00000007121	rab11ba	68	40.556	ENSCSEG00000016933	rab12	84	37.037
ENSCSEG00000007121	rab11ba	71	71.196	ENSCSEG00000011982	rab25b	97	64.679
ENSCSEG00000007121	rab11ba	63	34.731	ENSCSEG00000015770	si:cabz01085950.1	82	34.731
ENSCSEG00000007121	rab11ba	61	39.877	ENSCSEG00000005357	-	78	39.877
ENSCSEG00000007121	rab11ba	84	93.578	ENSCSEG00000012149	rab11bb	100	93.578
ENSCSEG00000007121	rab11ba	59	35.669	ENSCSEG00000012961	rab34a	60	35.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007121	rab11ba	84	94.495	ENSG00000185236	RAB11B	100	97.826	Homo_sapiens
ENSCSEG00000007121	rab11ba	84	94.064	ENSAMEG00000004955	RAB11B	99	94.064	Ailuropoda_melanoleuca
ENSCSEG00000007121	rab11ba	72	90.909	ENSACIG00000024374	rab11ba	77	90.909	Amphilophus_citrinellus
ENSCSEG00000007121	rab11ba	84	97.706	ENSAOCG00000018050	rab11ba	100	97.706	Amphiprion_ocellaris
ENSCSEG00000007121	rab11ba	84	97.248	ENSAPEG00000009177	rab11ba	100	97.248	Amphiprion_percula
ENSCSEG00000007121	rab11ba	84	97.706	ENSATEG00000023730	rab11ba	100	97.706	Anabas_testudineus
ENSCSEG00000007121	rab11ba	84	94.495	ENSANAG00000037616	RAB11B	100	94.495	Aotus_nancymaae
ENSCSEG00000007121	rab11ba	79	88.670	ENSACLG00000018852	-	92	88.670	Astatotilapia_calliptera
ENSCSEG00000007121	rab11ba	84	95.413	ENSACLG00000005420	rab11ba	100	95.413	Astatotilapia_calliptera
ENSCSEG00000007121	rab11ba	83	79.263	WBGene00004274	rab-11.1	99	79.263	Caenorhabditis_elegans
ENSCSEG00000007121	rab11ba	84	94.495	ENSCJAG00000010778	RAB11B	100	94.495	Callithrix_jacchus
ENSCSEG00000007121	rab11ba	84	94.495	ENSCAFG00000032060	RAB11B	100	94.495	Canis_familiaris
ENSCSEG00000007121	rab11ba	84	94.495	ENSCAFG00020022184	RAB11B	100	94.495	Canis_lupus_dingo
ENSCSEG00000007121	rab11ba	84	94.495	ENSTSYG00000014758	RAB11B	100	94.495	Carlito_syrichta
ENSCSEG00000007121	rab11ba	84	94.037	ENSCPOG00000030154	RAB11B	100	94.037	Cavia_porcellus
ENSCSEG00000007121	rab11ba	84	94.495	ENSCCAG00000031042	RAB11B	100	94.495	Cebus_capucinus
ENSCSEG00000007121	rab11ba	84	94.495	ENSCLAG00000003207	RAB11B	100	94.495	Chinchilla_lanigera
ENSCSEG00000007121	rab11ba	84	94.495	ENSCSAG00000008024	RAB11B	100	94.495	Chlorocebus_sabaeus
ENSCSEG00000007121	rab11ba	84	80.275	ENSCHOG00000013525	RAB11B	100	80.275	Choloepus_hoffmanni
ENSCSEG00000007121	rab11ba	84	82.569	ENSCING00000009526	-	100	82.569	Ciona_intestinalis
ENSCSEG00000007121	rab11ba	84	94.495	ENSCANG00000040517	RAB11B	100	94.495	Colobus_angolensis_palliatus
ENSCSEG00000007121	rab11ba	84	94.495	ENSCGRG00001013827	Rab11b	100	94.495	Cricetulus_griseus_chok1gshd
ENSCSEG00000007121	rab11ba	84	94.495	ENSCGRG00000010967	Rab11b	100	94.495	Cricetulus_griseus_crigri
ENSCSEG00000007121	rab11ba	84	94.495	ENSDARG00000041878	rab11ba	100	94.495	Danio_rerio
ENSCSEG00000007121	rab11ba	84	92.661	ENSDNOG00000004134	-	100	92.661	Dasypus_novemcinctus
ENSCSEG00000007121	rab11ba	84	94.495	ENSDNOG00000014618	RAB11B	97	94.495	Dasypus_novemcinctus
ENSCSEG00000007121	rab11ba	84	93.578	ENSDORG00000006304	Rab11b	100	93.578	Dipodomys_ordii
ENSCSEG00000007121	rab11ba	84	80.734	ENSEBUG00000015447	-	100	80.734	Eptatretus_burgeri
ENSCSEG00000007121	rab11ba	86	90.045	ENSEBUG00000011775	rab11ba	99	90.732	Eptatretus_burgeri
ENSCSEG00000007121	rab11ba	55	98.601	ENSEEUG00000009165	-	100	98.601	Erinaceus_europaeus
ENSCSEG00000007121	rab11ba	75	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSCSEG00000007121	rab11ba	84	94.037	ENSFCAG00000015216	RAB11B	100	94.037	Felis_catus
ENSCSEG00000007121	rab11ba	84	94.037	ENSFDAG00000019872	RAB11B	100	94.037	Fukomys_damarensis
ENSCSEG00000007121	rab11ba	84	97.248	ENSFHEG00000022642	rab11ba	100	97.248	Fundulus_heteroclitus
ENSCSEG00000007121	rab11ba	85	94.521	ENSGMOG00000007390	rab11ba	100	94.521	Gadus_morhua
ENSCSEG00000007121	rab11ba	84	96.789	ENSGAFG00000005679	rab11ba	100	96.789	Gambusia_affinis
ENSCSEG00000007121	rab11ba	84	95.413	ENSGAGG00000012557	-	100	95.413	Gopherus_agassizii
ENSCSEG00000007121	rab11ba	84	94.495	ENSHGLG00000014984	RAB11B	100	94.495	Heterocephalus_glaber_female
ENSCSEG00000007121	rab11ba	84	94.495	ENSHGLG00100003638	RAB11B	100	94.495	Heterocephalus_glaber_male
ENSCSEG00000007121	rab11ba	84	94.495	ENSSTOG00000031571	RAB11B	100	94.495	Ictidomys_tridecemlineatus
ENSCSEG00000007121	rab11ba	84	94.495	ENSJJAG00000018891	Rab11b	100	94.495	Jaculus_jaculus
ENSCSEG00000007121	rab11ba	84	97.248	ENSKMAG00000006082	-	100	97.248	Kryptolebias_marmoratus
ENSCSEG00000007121	rab11ba	84	96.330	ENSLBEG00000006087	rab11ba	100	96.330	Labrus_bergylta
ENSCSEG00000007121	rab11ba	66	98.824	ENSLACG00000016974	RAB11B	99	98.824	Latimeria_chalumnae
ENSCSEG00000007121	rab11ba	84	94.495	ENSLAFG00000013598	RAB11B	100	94.495	Loxodonta_africana
ENSCSEG00000007121	rab11ba	84	94.495	ENSMNEG00000039759	-	100	94.495	Macaca_nemestrina
ENSCSEG00000007121	rab11ba	84	96.789	ENSMAMG00000018556	rab11ba	100	96.789	Mastacembelus_armatus
ENSCSEG00000007121	rab11ba	84	95.413	ENSMZEG00005010947	rab11ba	100	95.413	Maylandia_zebra
ENSCSEG00000007121	rab11ba	79	88.670	ENSMZEG00005019251	-	92	88.670	Maylandia_zebra
ENSCSEG00000007121	rab11ba	84	94.495	ENSMAUG00000021579	Rab11b	100	94.495	Mesocricetus_auratus
ENSCSEG00000007121	rab11ba	84	94.037	ENSMOCG00000012667	Rab11b	100	94.037	Microtus_ochrogaster
ENSCSEG00000007121	rab11ba	84	92.661	ENSMALG00000021949	rab11ba	100	92.661	Monopterus_albus
ENSCSEG00000007121	rab11ba	84	94.495	MGP_CAROLIEiJ_G0021415	Rab11b	99	96.622	Mus_caroli
ENSCSEG00000007121	rab11ba	84	94.037	ENSMUSG00000077450	Rab11b	99	96.622	Mus_musculus
ENSCSEG00000007121	rab11ba	84	94.495	MGP_PahariEiJ_G0020420	Rab11b	100	94.495	Mus_pahari
ENSCSEG00000007121	rab11ba	84	94.495	MGP_SPRETEiJ_G0022327	Rab11b	99	96.622	Mus_spretus
ENSCSEG00000007121	rab11ba	84	94.037	ENSMPUG00000007263	RAB11B	100	94.037	Mustela_putorius_furo
ENSCSEG00000007121	rab11ba	84	90.045	ENSMLUG00000002308	-	100	90.045	Myotis_lucifugus
ENSCSEG00000007121	rab11ba	84	94.495	ENSNGAG00000015757	Rab11b	100	94.495	Nannospalax_galili
ENSCSEG00000007121	rab11ba	84	95.872	ENSNBRG00000023898	rab11ba	84	95.872	Neolamprologus_brichardi
ENSCSEG00000007121	rab11ba	84	94.495	ENSNLEG00000001733	RAB11B	100	94.495	Nomascus_leucogenys
ENSCSEG00000007121	rab11ba	84	94.495	ENSODEG00000011371	RAB11B	100	94.495	Octodon_degus
ENSCSEG00000007121	rab11ba	84	96.330	ENSONIG00000002535	rab11ba	100	96.330	Oreochromis_niloticus
ENSCSEG00000007121	rab11ba	62	96.894	ENSOCUG00000028208	RAB11B	64	96.894	Oryctolagus_cuniculus
ENSCSEG00000007121	rab11ba	84	97.222	ENSORLG00000015307	rab11ba	99	97.222	Oryzias_latipes
ENSCSEG00000007121	rab11ba	84	97.222	ENSORLG00020020816	rab11ba	99	97.222	Oryzias_latipes_hni
ENSCSEG00000007121	rab11ba	84	97.222	ENSORLG00015016946	rab11ba	81	97.222	Oryzias_latipes_hsok
ENSCSEG00000007121	rab11ba	84	97.222	ENSOMEG00000002581	rab11ba	99	97.222	Oryzias_melastigma
ENSCSEG00000007121	rab11ba	84	94.495	ENSOGAG00000003227	RAB11B	99	94.495	Otolemur_garnettii
ENSCSEG00000007121	rab11ba	84	94.495	ENSOARG00000003801	RAB11B	97	94.495	Ovis_aries
ENSCSEG00000007121	rab11ba	70	93.889	ENSPPRG00000010160	RAB11B	88	93.889	Panthera_pardus
ENSCSEG00000007121	rab11ba	84	94.495	ENSPEMG00000014536	Rab11b	100	94.495	Peromyscus_maniculatus_bairdii
ENSCSEG00000007121	rab11ba	79	80.476	ENSPMAG00000009335	-	100	80.476	Petromyzon_marinus
ENSCSEG00000007121	rab11ba	84	97.248	ENSPFOG00000006159	rab11ba	100	97.248	Poecilia_formosa
ENSCSEG00000007121	rab11ba	84	97.248	ENSPLAG00000014243	rab11ba	100	97.248	Poecilia_latipinna
ENSCSEG00000007121	rab11ba	84	97.248	ENSPMEG00000007917	rab11ba	75	97.248	Poecilia_mexicana
ENSCSEG00000007121	rab11ba	84	97.248	ENSPREG00000006357	rab11ba	78	97.248	Poecilia_reticulata
ENSCSEG00000007121	rab11ba	84	94.495	ENSPPYG00000009504	RAB11B	100	94.495	Pongo_abelii
ENSCSEG00000007121	rab11ba	84	85.780	ENSPCAG00000016118	RAB11B	100	85.780	Procavia_capensis
ENSCSEG00000007121	rab11ba	57	96.575	ENSPCOG00000008655	-	100	96.575	Propithecus_coquereli
ENSCSEG00000007121	rab11ba	84	94.495	ENSPCOG00000028053	RAB11B	100	94.495	Propithecus_coquereli
ENSCSEG00000007121	rab11ba	84	94.495	ENSPVAG00000009645	RAB11B	100	94.495	Pteropus_vampyrus
ENSCSEG00000007121	rab11ba	79	79.512	ENSPNYG00000023810	-	90	79.512	Pundamilia_nyererei
ENSCSEG00000007121	rab11ba	84	95.413	ENSPNYG00000019644	rab11ba	100	95.413	Pundamilia_nyererei
ENSCSEG00000007121	rab11ba	84	94.954	ENSPNAG00000006431	-	100	94.954	Pygocentrus_nattereri
ENSCSEG00000007121	rab11ba	84	94.495	ENSPNAG00000020475	rab11ba	100	94.495	Pygocentrus_nattereri
ENSCSEG00000007121	rab11ba	84	94.495	ENSRNOG00000007648	Rab11b	100	94.495	Rattus_norvegicus
ENSCSEG00000007121	rab11ba	84	94.495	ENSSBOG00000035094	RAB11B	100	94.495	Saimiri_boliviensis_boliviensis
ENSCSEG00000007121	rab11ba	84	98.148	ENSSDUG00000002965	rab11ba	100	97.248	Seriola_dumerili
ENSCSEG00000007121	rab11ba	84	97.248	ENSSLDG00000005221	rab11ba	100	97.248	Seriola_lalandi_dorsalis
ENSCSEG00000007121	rab11ba	84	97.248	ENSSPAG00000017313	rab11ba	100	97.248	Stegastes_partitus
ENSCSEG00000007121	rab11ba	84	94.495	ENSSSCG00000013600	RAB11B	100	94.495	Sus_scrofa
ENSCSEG00000007121	rab11ba	50	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSCSEG00000007121	rab11ba	84	94.495	ENSTTRG00000009758	RAB11B	100	94.495	Tursiops_truncatus
ENSCSEG00000007121	rab11ba	73	82.979	ENSUMAG00000014594	RAB11B	96	76.471	Ursus_maritimus
ENSCSEG00000007121	rab11ba	84	94.495	ENSVVUG00000025210	RAB11B	100	94.495	Vulpes_vulpes
ENSCSEG00000007121	rab11ba	84	93.119	ENSXETG00000021890	rab11b.2	99	93.119	Xenopus_tropicalis
ENSCSEG00000007121	rab11ba	52	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
ENSCSEG00000007121	rab11ba	84	96.789	ENSXMAG00000013416	rab11ba	100	96.789	Xiphophorus_maculatus