EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007185 (Gene tree)
Gene ID: 103393373
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3796 bases
Position: chr17:12631686-12635481
Accession: 103393373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000011180	RRP7	PF12923.7	6.3e-32	1	1
ENSCSEP00000011191	RRP7	PF12923.7	5e-27	1	1
ENSCSEP00000011191	RRM_1	PF00076.22	1.7e-06	1	1
ENSCSEP00000011180	RRM_1	PF00076.22	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000011317	-	3104	XM_008330318	ENSCSEP00000011180	282 (aa)	XP_008328540	UPI000496EE40
ENSCSET00000011328	-	813	-	ENSCSEP00000011191	270 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000007185's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007185	rrp7a	94	51.128	ENSG00000189306	RRP7A	93	50.752	Homo_sapiens
ENSCSEG00000007185	rrp7a	100	76.241	ENSAPOG00000021250	rrp7a	100	76.241	Acanthochromis_polyacanthus
ENSCSEG00000007185	rrp7a	94	50.752	ENSAMEG00000009503	RRP7A	93	50.752	Ailuropoda_melanoleuca
ENSCSEG00000007185	rrp7a	100	73.852	ENSACIG00000023067	rrp7a	100	73.852	Amphilophus_citrinellus
ENSCSEG00000007185	rrp7a	100	77.305	ENSAOCG00000004115	rrp7a	100	77.305	Amphiprion_ocellaris
ENSCSEG00000007185	rrp7a	100	77.305	ENSAPEG00000013688	rrp7a	100	77.305	Amphiprion_percula
ENSCSEG00000007185	rrp7a	100	76.950	ENSATEG00000009664	rrp7a	100	76.950	Anabas_testudineus
ENSCSEG00000007185	rrp7a	100	51.418	ENSACAG00000003579	RRP7A	99	51.064	Anolis_carolinensis
ENSCSEG00000007185	rrp7a	94	51.128	ENSANAG00000031200	RRP7A	93	50.752	Aotus_nancymaae
ENSCSEG00000007185	rrp7a	100	78.369	ENSACLG00000016790	rrp7a	100	78.369	Astatotilapia_calliptera
ENSCSEG00000007185	rrp7a	100	67.021	ENSAMXG00000007921	rrp7a	96	67.021	Astyanax_mexicanus
ENSCSEG00000007185	rrp7a	94	51.136	ENSBTAG00000016510	RRP7A	93	51.136	Bos_taurus
ENSCSEG00000007185	rrp7a	94	51.880	ENSCJAG00000009668	RRP7A	93	51.504	Callithrix_jacchus
ENSCSEG00000007185	rrp7a	94	51.504	ENSCAFG00000000965	RRP7	93	51.504	Canis_familiaris
ENSCSEG00000007185	rrp7a	94	51.504	ENSCAFG00020000251	RRP7A	93	51.504	Canis_lupus_dingo
ENSCSEG00000007185	rrp7a	94	50.758	ENSCHIG00000026787	RRP7A	99	48.592	Capra_hircus
ENSCSEG00000007185	rrp7a	94	50.376	ENSTSYG00000000198	RRP7A	93	50.376	Carlito_syrichta
ENSCSEG00000007185	rrp7a	94	49.624	ENSCAPG00000002325	RRP7A	100	49.624	Cavia_aperea
ENSCSEG00000007185	rrp7a	94	50.000	ENSCPOG00000030547	RRP7A	99	48.239	Cavia_porcellus
ENSCSEG00000007185	rrp7a	78	52.727	ENSCCAG00000021486	RRP7A	92	52.727	Cebus_capucinus
ENSCSEG00000007185	rrp7a	94	51.504	ENSCLAG00000016715	RRP7A	93	51.128	Chinchilla_lanigera
ENSCSEG00000007185	rrp7a	94	51.128	ENSCSAG00000005657	RRP7A	93	50.752	Chlorocebus_sabaeus
ENSCSEG00000007185	rrp7a	100	50.355	ENSCPBG00000021814	RRP7A	100	50.000	Chrysemys_picta_bellii
ENSCSEG00000007185	rrp7a	80	36.797	ENSCSAVG00000002555	-	86	36.364	Ciona_savignyi
ENSCSEG00000007185	rrp7a	82	49.130	ENSCGRG00001005713	-	99	48.696	Cricetulus_griseus_chok1gshd
ENSCSEG00000007185	rrp7a	64	71.875	ENSCGRG00001021873	-	90	71.875	Cricetulus_griseus_chok1gshd
ENSCSEG00000007185	rrp7a	94	51.311	ENSCGRG00000009567	-	93	50.936	Cricetulus_griseus_crigri
ENSCSEG00000007185	rrp7a	94	45.865	ENSCGRG00000000552	-	93	45.489	Cricetulus_griseus_crigri
ENSCSEG00000007185	rrp7a	92	45.000	ENSCGRG00000000540	-	100	45.161	Cricetulus_griseus_crigri
ENSCSEG00000007185	rrp7a	100	75.887	ENSCVAG00000004349	rrp7a	100	75.887	Cyprinodon_variegatus
ENSCSEG00000007185	rrp7a	97	59.420	ENSDARG00000098934	rrp7a	99	59.420	Danio_rerio
ENSCSEG00000007185	rrp7a	100	49.296	ENSDNOG00000037442	RRP7A	92	49.296	Dasypus_novemcinctus
ENSCSEG00000007185	rrp7a	100	48.944	ENSDORG00000016138	Rrp7a	100	48.592	Dipodomys_ordii
ENSCSEG00000007185	rrp7a	94	33.935	FBgn0031764	CG9107	98	34.066	Drosophila_melanogaster
ENSCSEG00000007185	rrp7a	92	51.154	ENSETEG00000018025	RRP7A	100	51.538	Echinops_telfairi
ENSCSEG00000007185	rrp7a	100	42.014	ENSEBUG00000010231	rrp7a	98	42.014	Eptatretus_burgeri
ENSCSEG00000007185	rrp7a	94	51.504	ENSEASG00005000804	RRP7A	93	51.504	Equus_asinus_asinus
ENSCSEG00000007185	rrp7a	94	51.880	ENSECAG00000015168	RRP7	93	51.504	Equus_caballus
ENSCSEG00000007185	rrp7a	100	68.440	ENSELUG00000009036	rrp7a	100	68.440	Esox_lucius
ENSCSEG00000007185	rrp7a	100	48.592	ENSFCAG00000033258	RRP7A	79	48.592	Felis_catus
ENSCSEG00000007185	rrp7a	92	52.308	ENSFALG00000011635	RRP7A	94	49.822	Ficedula_albicollis
ENSCSEG00000007185	rrp7a	100	50.000	ENSFDAG00000001321	RRP7A	100	49.648	Fukomys_damarensis
ENSCSEG00000007185	rrp7a	100	76.596	ENSFHEG00000006098	rrp7a	97	76.596	Fundulus_heteroclitus
ENSCSEG00000007185	rrp7a	95	66.418	ENSGMOG00000006218	rrp7a	99	66.418	Gadus_morhua
ENSCSEG00000007185	rrp7a	100	51.418	ENSGALG00000011866	RRP7A	100	51.064	Gallus_gallus
ENSCSEG00000007185	rrp7a	100	72.340	ENSGAFG00000017459	rrp7a	100	72.340	Gambusia_affinis
ENSCSEG00000007185	rrp7a	95	72.015	ENSGACG00000007212	rrp7a	99	72.015	Gasterosteus_aculeatus
ENSCSEG00000007185	rrp7a	100	49.291	ENSGAGG00000014621	RRP7A	100	48.936	Gopherus_agassizii
ENSCSEG00000007185	rrp7a	94	50.752	ENSGGOG00000014957	RRP7A	93	50.752	Gorilla_gorilla
ENSCSEG00000007185	rrp7a	100	78.014	ENSHBUG00000021788	rrp7a	100	78.014	Haplochromis_burtoni
ENSCSEG00000007185	rrp7a	95	50.741	ENSHGLG00000015706	RRP7A	94	50.741	Heterocephalus_glaber_female
ENSCSEG00000007185	rrp7a	94	48.872	ENSHGLG00100009556	-	93	48.872	Heterocephalus_glaber_male
ENSCSEG00000007185	rrp7a	94	49.248	ENSHGLG00100008187	-	94	48.872	Heterocephalus_glaber_male
ENSCSEG00000007185	rrp7a	100	70.213	ENSHCOG00000005813	rrp7a	87	70.213	Hippocampus_comes
ENSCSEG00000007185	rrp7a	100	66.312	ENSIPUG00000000556	rrp7a	100	66.312	Ictalurus_punctatus
ENSCSEG00000007185	rrp7a	94	50.752	ENSSTOG00000003111	RRP7A	93	50.376	Ictidomys_tridecemlineatus
ENSCSEG00000007185	rrp7a	96	47.970	ENSJJAG00000019486	Rrp7a	95	47.970	Jaculus_jaculus
ENSCSEG00000007185	rrp7a	100	75.532	ENSKMAG00000013819	rrp7a	100	75.532	Kryptolebias_marmoratus
ENSCSEG00000007185	rrp7a	94	52.453	ENSLACG00000002670	RRP7A	96	52.075	Latimeria_chalumnae
ENSCSEG00000007185	rrp7a	94	51.128	ENSLAFG00000012447	RRP7A	93	50.752	Loxodonta_africana
ENSCSEG00000007185	rrp7a	94	46.617	ENSMFAG00000041664	-	93	46.617	Macaca_fascicularis
ENSCSEG00000007185	rrp7a	94	51.128	ENSMFAG00000042855	RRP7A	93	50.752	Macaca_fascicularis
ENSCSEG00000007185	rrp7a	94	48.120	ENSMMUG00000010193	-	93	48.120	Macaca_mulatta
ENSCSEG00000007185	rrp7a	94	44.737	ENSMMUG00000009716	RRP7A	92	44.361	Macaca_mulatta
ENSCSEG00000007185	rrp7a	94	51.504	ENSMNEG00000033705	RRP7A	93	51.504	Macaca_nemestrina
ENSCSEG00000007185	rrp7a	94	48.120	ENSMLEG00000040230	RRP7A	99	47.744	Mandrillus_leucophaeus
ENSCSEG00000007185	rrp7a	100	77.660	ENSMAMG00000009125	rrp7a	100	77.660	Mastacembelus_armatus
ENSCSEG00000007185	rrp7a	100	78.369	ENSMZEG00005005197	rrp7a	100	78.369	Maylandia_zebra
ENSCSEG00000007185	rrp7a	93	53.257	ENSMGAG00000011980	RRP7A	100	52.874	Meleagris_gallopavo
ENSCSEG00000007185	rrp7a	94	50.376	ENSMICG00000041800	RRP7A	93	50.376	Microcebus_murinus
ENSCSEG00000007185	rrp7a	100	76.596	ENSMMOG00000004976	rrp7a	100	76.596	Mola_mola
ENSCSEG00000007185	rrp7a	100	47.586	ENSMODG00000006914	RRP7A	99	46.897	Monodelphis_domestica
ENSCSEG00000007185	rrp7a	100	78.014	ENSMALG00000001933	rrp7a	100	78.014	Monopterus_albus
ENSCSEG00000007185	rrp7a	100	46.667	MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.667	Mus_caroli
ENSCSEG00000007185	rrp7a	94	48.120	ENSMUSG00000018040	Rrp7a	98	74.000	Mus_musculus
ENSCSEG00000007185	rrp7a	94	47.368	MGP_PahariEiJ_G0020099	Rrp7a	93	47.368	Mus_pahari
ENSCSEG00000007185	rrp7a	94	48.120	MGP_SPRETEiJ_G0020990	Rrp7a	93	48.120	Mus_spretus
ENSCSEG00000007185	rrp7a	94	50.376	ENSMPUG00000016315	RRP7A	93	50.376	Mustela_putorius_furo
ENSCSEG00000007185	rrp7a	94	51.128	ENSMLUG00000012404	RRP7A	93	50.752	Myotis_lucifugus
ENSCSEG00000007185	rrp7a	94	49.624	ENSNGAG00000010039	Rrp7a	93	49.624	Nannospalax_galili
ENSCSEG00000007185	rrp7a	99	77.936	ENSNBRG00000001824	rrp7a	100	77.936	Neolamprologus_brichardi
ENSCSEG00000007185	rrp7a	94	50.752	ENSNLEG00000036258	RRP7A	93	50.752	Nomascus_leucogenys
ENSCSEG00000007185	rrp7a	100	49.825	ENSODEG00000015126	RRP7A	100	47.535	Octodon_degus
ENSCSEG00000007185	rrp7a	100	78.723	ENSONIG00000008364	rrp7a	99	78.723	Oreochromis_niloticus
ENSCSEG00000007185	rrp7a	84	43.038	ENSOANG00000015007	RRP7A	86	42.616	Ornithorhynchus_anatinus
ENSCSEG00000007185	rrp7a	99	44.366	ENSOCUG00000027434	RRP7A	95	45.556	Oryctolagus_cuniculus
ENSCSEG00000007185	rrp7a	100	73.050	ENSORLG00000014826	rrp7a	100	73.050	Oryzias_latipes
ENSCSEG00000007185	rrp7a	100	73.050	ENSORLG00020006078	rrp7a	100	73.050	Oryzias_latipes_hni
ENSCSEG00000007185	rrp7a	100	73.050	ENSORLG00015018190	rrp7a	100	73.050	Oryzias_latipes_hsok
ENSCSEG00000007185	rrp7a	98	72.202	ENSOMEG00000007090	rrp7a	99	72.202	Oryzias_melastigma
ENSCSEG00000007185	rrp7a	100	47.719	ENSOGAG00000002857	RRP7A	100	47.719	Otolemur_garnettii
ENSCSEG00000007185	rrp7a	94	50.758	ENSOARG00000018986	RRP7A	99	48.592	Ovis_aries
ENSCSEG00000007185	rrp7a	84	48.739	ENSPPAG00000021416	-	83	48.739	Pan_paniscus
ENSCSEG00000007185	rrp7a	75	49.763	ENSPPAG00000029825	-	93	46.753	Pan_paniscus
ENSCSEG00000007185	rrp7a	100	49.296	ENSPPRG00000022185	RRP7A	99	49.296	Panthera_pardus
ENSCSEG00000007185	rrp7a	94	38.610	ENSPTIG00000020965	RRP7A	99	38.849	Panthera_tigris_altaica
ENSCSEG00000007185	rrp7a	50	45.926	ENSPTRG00000033935	-	87	45.926	Pan_troglodytes
ENSCSEG00000007185	rrp7a	94	48.120	ENSPANG00000032001	-	93	48.120	Papio_anubis
ENSCSEG00000007185	rrp7a	94	50.752	ENSPANG00000025354	-	93	50.376	Papio_anubis
ENSCSEG00000007185	rrp7a	100	63.958	ENSPKIG00000007209	rrp7a	86	64.311	Paramormyrops_kingsleyae
ENSCSEG00000007185	rrp7a	88	53.629	ENSPSIG00000007988	RRP7A	97	50.575	Pelodiscus_sinensis
ENSCSEG00000007185	rrp7a	93	64.800	ENSPMGG00000009485	rrp7a	91	66.000	Periophthalmus_magnuspinnatus
ENSCSEG00000007185	rrp7a	94	49.248	ENSPEMG00000022265	Rrp7a	93	48.872	Peromyscus_maniculatus_bairdii
ENSCSEG00000007185	rrp7a	93	46.008	ENSPMAG00000002823	rrp7a	94	45.627	Petromyzon_marinus
ENSCSEG00000007185	rrp7a	94	50.000	ENSPCIG00000026195	RRP7A	93	48.872	Phascolarctos_cinereus
ENSCSEG00000007185	rrp7a	100	75.177	ENSPFOG00000001042	rrp7a	100	75.177	Poecilia_formosa
ENSCSEG00000007185	rrp7a	61	76.163	ENSPLAG00000010787	-	72	76.163	Poecilia_latipinna
ENSCSEG00000007185	rrp7a	61	76.163	ENSPLAG00000009537	rrp7a	72	76.163	Poecilia_latipinna
ENSCSEG00000007185	rrp7a	100	74.468	ENSPMEG00000018204	rrp7a	100	74.468	Poecilia_mexicana
ENSCSEG00000007185	rrp7a	100	73.759	ENSPREG00000016492	rrp7a	100	73.759	Poecilia_reticulata
ENSCSEG00000007185	rrp7a	94	51.128	ENSPPYG00000011897	RRP7A	93	50.752	Pongo_abelii
ENSCSEG00000007185	rrp7a	94	50.376	ENSPCOG00000014018	RRP7A	93	50.000	Propithecus_coquereli
ENSCSEG00000007185	rrp7a	84	46.639	ENSPVAG00000003330	RRP7A	92	46.218	Pteropus_vampyrus
ENSCSEG00000007185	rrp7a	100	78.369	ENSPNYG00000020343	rrp7a	100	78.369	Pundamilia_nyererei
ENSCSEG00000007185	rrp7a	100	68.085	ENSPNAG00000014376	rrp7a	100	68.085	Pygocentrus_nattereri
ENSCSEG00000007185	rrp7a	94	47.368	ENSRNOG00000022896	Rrp7a	93	47.368	Rattus_norvegicus
ENSCSEG00000007185	rrp7a	94	48.327	ENSRBIG00000040358	RRP7A	93	48.327	Rhinopithecus_bieti
ENSCSEG00000007185	rrp7a	94	51.311	ENSRROG00000036754	RRP7A	93	51.311	Rhinopithecus_roxellana
ENSCSEG00000007185	rrp7a	94	50.376	ENSSBOG00000009234	RRP7A	93	50.376	Saimiri_boliviensis_boliviensis
ENSCSEG00000007185	rrp7a	76	52.804	ENSSHAG00000005715	RRP7A	100	51.402	Sarcophilus_harrisii
ENSCSEG00000007185	rrp7a	100	68.794	ENSSFOG00015012621	rrp7a	89	66.312	Scleropages_formosus
ENSCSEG00000007185	rrp7a	100	73.050	ENSSMAG00000004593	rrp7a	100	73.050	Scophthalmus_maximus
ENSCSEG00000007185	rrp7a	100	78.369	ENSSDUG00000016921	rrp7a	100	78.369	Seriola_dumerili
ENSCSEG00000007185	rrp7a	100	78.014	ENSSLDG00000024758	rrp7a	100	78.014	Seriola_lalandi_dorsalis
ENSCSEG00000007185	rrp7a	63	71.429	ENSSARG00000002133	-	66	71.429	Sorex_araneus
ENSCSEG00000007185	rrp7a	85	47.083	ENSSPUG00000005373	RRP7A	95	46.888	Sphenodon_punctatus
ENSCSEG00000007185	rrp7a	100	77.305	ENSSPAG00000016048	rrp7a	100	77.305	Stegastes_partitus
ENSCSEG00000007185	rrp7a	96	49.630	ENSSSCG00000033983	RRP7A	100	47.719	Sus_scrofa
ENSCSEG00000007185	rrp7a	92	53.077	ENSTGUG00000009647	RRP7A	100	52.692	Taeniopygia_guttata
ENSCSEG00000007185	rrp7a	100	76.241	ENSTRUG00000024726	rrp7a	100	76.241	Takifugu_rubripes
ENSCSEG00000007185	rrp7a	100	75.532	ENSTNIG00000010842	rrp7a	99	75.532	Tetraodon_nigroviridis
ENSCSEG00000007185	rrp7a	94	51.128	ENSUAMG00000026180	RRP7A	93	51.128	Ursus_americanus
ENSCSEG00000007185	rrp7a	94	48.872	ENSUMAG00000020394	RRP7A	93	49.624	Ursus_maritimus
ENSCSEG00000007185	rrp7a	93	51.341	ENSVVUG00000002248	-	65	51.341	Vulpes_vulpes
ENSCSEG00000007185	rrp7a	94	50.187	ENSXETG00000013414	rrp7a	96	50.187	Xenopus_tropicalis
ENSCSEG00000007185	rrp7a	100	71.731	ENSXCOG00000015955	rrp7a	100	71.731	Xiphophorus_couchianus
ENSCSEG00000007185	rrp7a	100	72.340	ENSXMAG00000006165	rrp7a	100	72.340	Xiphophorus_maculatus