EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000007239 (Gene tree)
Gene ID: 103376755
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5983 bases
Position: chr2:18395106-18401088
Accession: 103376755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000011264	MMR_HSR1	PF01926.23	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000011401	-	1867	XM_008307262	ENSCSEP00000011264	218 (aa)	XP_008305484	UPI000495D061

Gene Model

Click here to download ENSCSEG00000007239's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000007239	-	50	50.459	ENSCSEG00000009988	si:dkey-16l2.16	83	50.459
ENSCSEG00000007239	-	72	43.949	ENSCSEG00000019797	rab22a	81	43.949
ENSCSEG00000007239	-	76	43.373	ENSCSEG00000003768	rab15	71	43.373
ENSCSEG00000007239	-	72	40.994	ENSCSEG00000010116	rab9a	75	40.994
ENSCSEG00000007239	-	99	83.028	ENSCSEG00000011996	rab11al	99	83.028
ENSCSEG00000007239	-	94	31.308	ENSCSEG00000012961	rab34a	80	31.308
ENSCSEG00000007239	-	81	35.028	ENSCSEG00000011820	rras	89	35.028
ENSCSEG00000007239	-	66	40.000	ENSCSEG00000014479	-	62	40.000
ENSCSEG00000007239	-	72	39.877	ENSCSEG00000005357	-	78	39.877
ENSCSEG00000007239	-	72	36.943	ENSCSEG00000004941	rab41	74	36.943
ENSCSEG00000007239	-	86	42.781	ENSCSEG00000007292	rab30	92	42.781
ENSCSEG00000007239	-	100	94.954	ENSCSEG00000007121	rab11ba	84	94.954
ENSCSEG00000007239	-	100	97.248	ENSCSEG00000012149	rab11bb	100	97.248
ENSCSEG00000007239	-	74	30.675	ENSCSEG00000003537	rhebl1	88	30.675
ENSCSEG00000007239	-	74	32.927	ENSCSEG00000018987	si:ch73-116o1.2	82	34.659
ENSCSEG00000007239	-	74	34.731	ENSCSEG00000015770	si:cabz01085950.1	82	34.731
ENSCSEG00000007239	-	74	31.792	ENSCSEG00000000717	rasl11a	69	31.792
ENSCSEG00000007239	-	77	52.695	ENSCSEG00000016498	rab14	78	52.695
ENSCSEG00000007239	-	76	48.795	ENSCSEG00000013400	rab35b	99	43.062
ENSCSEG00000007239	-	72	35.032	ENSCSEG00000003122	rab6ba	75	35.032
ENSCSEG00000007239	-	77	36.842	ENSCSEG00000019183	si:dkey-34d22.5	77	36.842
ENSCSEG00000007239	-	94	42.995	ENSCSEG00000019722	RAB39B	96	42.995
ENSCSEG00000007239	-	95	46.377	ENSCSEG00000020977	-	96	46.377
ENSCSEG00000007239	-	68	34.000	ENSCSEG00000010565	rab23	82	33.728
ENSCSEG00000007239	-	79	46.552	ENSCSEG00000017861	-	82	46.552
ENSCSEG00000007239	-	78	45.614	ENSCSEG00000016803	rab18b	87	45.614
ENSCSEG00000007239	-	78	36.111	ENSCSEG00000020348	rab33ba	76	36.111
ENSCSEG00000007239	-	80	39.344	ENSCSEG00000006243	zgc:101559	78	39.344
ENSCSEG00000007239	-	100	86.239	ENSCSEG00000007383	rab11a	100	86.239
ENSCSEG00000007239	-	72	39.877	ENSCSEG00000002970	RAB7A	73	39.877
ENSCSEG00000007239	-	75	42.424	ENSCSEG00000016933	rab12	84	37.736
ENSCSEG00000007239	-	76	43.373	ENSCSEG00000000205	RAB15	80	43.373
ENSCSEG00000007239	-	78	54.386	ENSCSEG00000017211	rab2a	81	54.386
ENSCSEG00000007239	-	83	42.077	ENSCSEG00000010582	rab42a	84	42.077
ENSCSEG00000007239	-	82	38.043	ENSCSEG00000016284	rab33a	65	38.043
ENSCSEG00000007239	-	70	34.839	ENSCSEG00000005737	kras	87	35.928
ENSCSEG00000007239	-	83	73.481	ENSCSEG00000011982	rab25b	97	64.679
ENSCSEG00000007239	-	59	37.692	ENSCSEG00000011160	rab20	54	37.692
ENSCSEG00000007239	-	79	40.678	ENSCSEG00000014467	rab9b	79	40.678
ENSCSEG00000007239	-	99	64.055	ENSCSEG00000017026	rab25a	99	64.055
ENSCSEG00000007239	-	75	47.239	ENSCSEG00000017024	rab5c	74	47.239
ENSCSEG00000007239	-	96	45.455	ENSCSEG00000018732	rab1ba	99	45.455
ENSCSEG00000007239	-	73	32.500	ENSCSEG00000016611	rheb	86	32.500
ENSCSEG00000007239	-	96	45.498	ENSCSEG00000014416	zgc:171927	99	45.498
ENSCSEG00000007239	-	72	35.669	ENSCSEG00000016556	rab6bb	75	35.669
ENSCSEG00000007239	-	77	35.882	ENSCSEG00000005479	rabl2	72	35.882
ENSCSEG00000007239	-	82	46.067	ENSCSEG00000002358	rab13	87	47.399
ENSCSEG00000007239	-	58	37.500	ENSCSEG00000018133	rab34b	51	37.500
ENSCSEG00000007239	-	97	41.935	ENSCSEG00000010402	-	96	41.935
ENSCSEG00000007239	-	84	42.553	ENSCSEG00000011816	rab18a	92	42.553
ENSCSEG00000007239	-	68	35.333	ENSCSEG00000007927	hrasb	85	36.420

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007239	-	100	97.248	ENSAPOG00000023455	rab11bb	100	97.248	Acanthochromis_polyacanthus
ENSCSEG00000007239	-	100	99.541	ENSACIG00000024376	-	100	99.541	Amphilophus_citrinellus
ENSCSEG00000007239	-	100	85.321	ENSACIG00000019631	rab11bb	100	85.321	Amphilophus_citrinellus
ENSCSEG00000007239	-	100	99.541	ENSAOCG00000018849	-	100	99.541	Amphiprion_ocellaris
ENSCSEG00000007239	-	100	97.248	ENSAOCG00000018239	rab11bb	100	97.248	Amphiprion_ocellaris
ENSCSEG00000007239	-	100	97.248	ENSAPEG00000016590	rab11bb	100	97.248	Amphiprion_percula
ENSCSEG00000007239	-	100	99.083	ENSATEG00000023725	-	100	99.083	Anabas_testudineus
ENSCSEG00000007239	-	100	97.248	ENSATEG00000017696	rab11bb	100	97.248	Anabas_testudineus
ENSCSEG00000007239	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSCSEG00000007239	-	100	97.248	ENSACLG00000007076	rab11bb	100	97.248	Astatotilapia_calliptera
ENSCSEG00000007239	-	100	99.541	ENSACLG00000005446	-	100	99.541	Astatotilapia_calliptera
ENSCSEG00000007239	-	100	96.330	ENSAMXG00000037623	-	100	96.330	Astyanax_mexicanus
ENSCSEG00000007239	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSCSEG00000007239	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSCSEG00000007239	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSCSEG00000007239	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSCSEG00000007239	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSCSEG00000007239	-	100	98.624	ENSCVAG00000019718	-	100	98.624	Cyprinodon_variegatus
ENSCSEG00000007239	-	100	97.248	ENSCVAG00000017021	-	100	97.248	Cyprinodon_variegatus
ENSCSEG00000007239	-	100	95.413	ENSCVAG00000019751	-	100	95.413	Cyprinodon_variegatus
ENSCSEG00000007239	-	100	97.248	ENSDARG00000090086	rab11bb	100	97.248	Danio_rerio
ENSCSEG00000007239	-	99	94.009	ENSETEG00000000905	-	99	94.009	Echinops_telfairi
ENSCSEG00000007239	-	99	93.953	ENSEASG00005003708	-	99	93.953	Equus_asinus_asinus
ENSCSEG00000007239	-	99	93.953	ENSECAG00000000716	RAB11B	99	93.953	Equus_caballus
ENSCSEG00000007239	-	100	97.706	ENSELUG00000021148	rab11bb	100	97.706	Esox_lucius
ENSCSEG00000007239	-	100	98.165	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSCSEG00000007239	-	100	97.248	ENSELUG00000000916	-	100	97.248	Esox_lucius
ENSCSEG00000007239	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSCSEG00000007239	-	100	99.083	ENSFHEG00000022676	-	100	99.083	Fundulus_heteroclitus
ENSCSEG00000007239	-	100	97.248	ENSFHEG00000018353	rab11bb	100	97.248	Fundulus_heteroclitus
ENSCSEG00000007239	-	99	95.833	ENSGMOG00000009668	-	99	95.833	Gadus_morhua
ENSCSEG00000007239	-	100	97.248	ENSGMOG00000009211	rab11bb	100	97.248	Gadus_morhua
ENSCSEG00000007239	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSCSEG00000007239	-	100	97.248	ENSGAFG00000007102	rab11bb	100	97.248	Gambusia_affinis
ENSCSEG00000007239	-	100	96.789	ENSGACG00000015479	rab11bb	100	96.789	Gasterosteus_aculeatus
ENSCSEG00000007239	-	100	94.954	ENSGACG00000013297	-	99	94.954	Gasterosteus_aculeatus
ENSCSEG00000007239	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSCSEG00000007239	-	100	97.248	ENSHBUG00000014777	rab11bb	100	97.248	Haplochromis_burtoni
ENSCSEG00000007239	-	100	99.541	ENSHBUG00000009947	-	100	99.541	Haplochromis_burtoni
ENSCSEG00000007239	-	100	93.119	ENSHCOG00000000985	-	100	93.119	Hippocampus_comes
ENSCSEG00000007239	-	100	96.330	ENSHCOG00000000954	-	100	96.330	Hippocampus_comes
ENSCSEG00000007239	-	100	97.706	ENSHCOG00000002423	rab11bb	100	97.706	Hippocampus_comes
ENSCSEG00000007239	-	100	96.330	ENSIPUG00000025100	rab11b	100	96.330	Ictalurus_punctatus
ENSCSEG00000007239	-	100	98.165	ENSIPUG00000019927	rab11bb	100	98.165	Ictalurus_punctatus
ENSCSEG00000007239	-	100	97.248	ENSKMAG00000009033	rab11bb	100	97.248	Kryptolebias_marmoratus
ENSCSEG00000007239	-	100	99.541	ENSKMAG00000006170	-	100	99.541	Kryptolebias_marmoratus
ENSCSEG00000007239	-	100	98.624	ENSLBEG00000004172	-	100	98.624	Labrus_bergylta
ENSCSEG00000007239	-	100	91.284	ENSLBEG00000005981	-	100	91.284	Labrus_bergylta
ENSCSEG00000007239	-	100	97.248	ENSLBEG00000015248	rab11bb	100	97.248	Labrus_bergylta
ENSCSEG00000007239	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSCSEG00000007239	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSCSEG00000007239	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSCSEG00000007239	-	100	98.165	ENSMAMG00000018533	-	100	98.165	Mastacembelus_armatus
ENSCSEG00000007239	-	100	96.789	ENSMAMG00000006378	rab11bb	100	96.789	Mastacembelus_armatus
ENSCSEG00000007239	-	100	99.541	ENSMZEG00005010975	-	100	99.541	Maylandia_zebra
ENSCSEG00000007239	-	100	97.248	ENSMZEG00005003352	rab11bb	100	97.248	Maylandia_zebra
ENSCSEG00000007239	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSCSEG00000007239	-	100	99.541	ENSMMOG00000001250	-	100	99.541	Mola_mola
ENSCSEG00000007239	-	94	97.073	ENSMMOG00000007917	rab11bb	100	97.073	Mola_mola
ENSCSEG00000007239	-	99	95.392	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSCSEG00000007239	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSCSEG00000007239	-	100	97.248	ENSMALG00000022187	rab11bb	100	97.248	Monopterus_albus
ENSCSEG00000007239	-	94	88.406	ENSMLUG00000006677	-	100	88.406	Myotis_lucifugus
ENSCSEG00000007239	-	100	97.248	ENSNBRG00000000372	rab11bb	100	97.248	Neolamprologus_brichardi
ENSCSEG00000007239	-	100	99.541	ENSNBRG00000023885	-	100	99.541	Neolamprologus_brichardi
ENSCSEG00000007239	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSCSEG00000007239	-	100	99.541	ENSONIG00000002544	-	100	99.541	Oreochromis_niloticus
ENSCSEG00000007239	-	100	97.248	ENSONIG00000010435	rab11bb	100	97.248	Oreochromis_niloticus
ENSCSEG00000007239	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSCSEG00000007239	-	99	97.696	ENSORLG00000015284	-	72	97.696	Oryzias_latipes
ENSCSEG00000007239	-	100	96.789	ENSORLG00000013938	rab11bb	100	96.789	Oryzias_latipes
ENSCSEG00000007239	-	99	97.696	ENSORLG00020020844	RAB11B	99	97.696	Oryzias_latipes_hni
ENSCSEG00000007239	-	100	96.789	ENSORLG00020019393	rab11bb	100	96.789	Oryzias_latipes_hni
ENSCSEG00000007239	-	100	96.789	ENSORLG00015020173	rab11bb	100	96.789	Oryzias_latipes_hsok
ENSCSEG00000007239	-	99	97.696	ENSORLG00015016999	RAB11B	99	97.696	Oryzias_latipes_hsok
ENSCSEG00000007239	-	100	97.248	ENSOMEG00000017806	-	100	97.248	Oryzias_melastigma
ENSCSEG00000007239	-	100	98.624	ENSOMEG00000002562	-	100	98.624	Oryzias_melastigma
ENSCSEG00000007239	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSCSEG00000007239	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSCSEG00000007239	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSCSEG00000007239	-	100	97.248	ENSPKIG00000011640	rab11bb	100	97.248	Paramormyrops_kingsleyae
ENSCSEG00000007239	-	100	96.789	ENSPKIG00000011703	-	100	96.789	Paramormyrops_kingsleyae
ENSCSEG00000007239	-	98	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSCSEG00000007239	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSCSEG00000007239	-	99	94.009	ENSPMGG00000014336	-	99	94.009	Periophthalmus_magnuspinnatus
ENSCSEG00000007239	-	100	97.706	ENSPMGG00000014333	-	100	97.706	Periophthalmus_magnuspinnatus
ENSCSEG00000007239	-	100	97.248	ENSPMGG00000009435	rab11bb	100	97.248	Periophthalmus_magnuspinnatus
ENSCSEG00000007239	-	97	96.698	ENSPCIG00000020371	-	99	96.698	Phascolarctos_cinereus
ENSCSEG00000007239	-	100	99.541	ENSPFOG00000006224	-	100	99.541	Poecilia_formosa
ENSCSEG00000007239	-	100	97.248	ENSPFOG00000024114	-	100	97.248	Poecilia_formosa
ENSCSEG00000007239	-	100	99.541	ENSPLAG00000014207	-	100	99.541	Poecilia_latipinna
ENSCSEG00000007239	-	100	97.248	ENSPLAG00000001598	rab11bb	100	97.248	Poecilia_latipinna
ENSCSEG00000007239	-	100	99.541	ENSPMEG00000007842	-	100	99.541	Poecilia_mexicana
ENSCSEG00000007239	-	100	97.248	ENSPMEG00000012389	rab11bb	100	97.248	Poecilia_mexicana
ENSCSEG00000007239	-	100	97.248	ENSPREG00000014269	rab11bb	100	97.248	Poecilia_reticulata
ENSCSEG00000007239	-	100	99.083	ENSPREG00000006336	-	100	99.083	Poecilia_reticulata
ENSCSEG00000007239	-	100	97.248	ENSPNYG00000004098	rab11bb	100	97.248	Pundamilia_nyererei
ENSCSEG00000007239	-	100	99.541	ENSPNYG00000019611	-	100	99.541	Pundamilia_nyererei
ENSCSEG00000007239	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSCSEG00000007239	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSCSEG00000007239	-	100	96.789	ENSSFOG00015009042	rab11bb	100	96.789	Scleropages_formosus
ENSCSEG00000007239	-	100	73.394	ENSSFOG00015006245	-	100	73.394	Scleropages_formosus
ENSCSEG00000007239	-	100	95.872	ENSSMAG00000018613	-	100	95.872	Scophthalmus_maximus
ENSCSEG00000007239	-	100	96.789	ENSSMAG00000004922	rab11bb	100	96.789	Scophthalmus_maximus
ENSCSEG00000007239	-	100	97.248	ENSSDUG00000013558	rab11bb	100	97.248	Seriola_dumerili
ENSCSEG00000007239	-	100	99.541	ENSSDUG00000002934	-	100	99.541	Seriola_dumerili
ENSCSEG00000007239	-	100	97.248	ENSSLDG00000020676	rab11bb	100	97.248	Seriola_lalandi_dorsalis
ENSCSEG00000007239	-	100	99.541	ENSSLDG00000005275	-	100	99.541	Seriola_lalandi_dorsalis
ENSCSEG00000007239	-	100	97.248	ENSSPUG00000002243	-	100	97.248	Sphenodon_punctatus
ENSCSEG00000007239	-	100	97.248	ENSSPAG00000011419	rab11bb	100	97.248	Stegastes_partitus
ENSCSEG00000007239	-	100	99.541	ENSSPAG00000014559	-	100	99.541	Stegastes_partitus
ENSCSEG00000007239	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSCSEG00000007239	-	100	97.248	ENSTRUG00000022029	rab11bb	100	97.248	Takifugu_rubripes
ENSCSEG00000007239	-	99	96.313	ENSTRUG00000021614	-	99	96.313	Takifugu_rubripes
ENSCSEG00000007239	-	99	99.074	ENSTRUG00000021619	-	100	99.074	Takifugu_rubripes
ENSCSEG00000007239	-	99	95.853	ENSTNIG00000013184	-	99	95.853	Tetraodon_nigroviridis
ENSCSEG00000007239	-	99	99.074	ENSTNIG00000013182	-	100	99.074	Tetraodon_nigroviridis
ENSCSEG00000007239	-	93	97.537	ENSTNIG00000002003	-	100	97.537	Tetraodon_nigroviridis
ENSCSEG00000007239	-	100	97.248	ENSTNIG00000011081	rab11bb	100	97.248	Tetraodon_nigroviridis
ENSCSEG00000007239	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSCSEG00000007239	-	100	96.347	ENSXETG00000025484	rab11b.1	99	96.347	Xenopus_tropicalis
ENSCSEG00000007239	-	100	97.248	ENSXCOG00000008042	-	100	97.248	Xiphophorus_couchianus
ENSCSEG00000007239	-	100	99.541	ENSXCOG00000009190	-	100	99.541	Xiphophorus_couchianus
ENSCSEG00000007239	-	100	99.083	ENSXMAG00000024840	-	100	99.083	Xiphophorus_maculatus
ENSCSEG00000007239	-	100	97.248	ENSXMAG00000011926	rab11bb	100	97.248	Xiphophorus_maculatus