EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000007342 (Gene tree)
Gene ID: 103396824
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8486 bases
Position: chr20:15152979-15161464
Accession: 103396824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000011414	La	PF05383.17	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000011555	LARP4B-201	1965	XM_008335057	ENSCSEP00000011414	654 (aa)	XP_008333279	-

Gene Model

Click here to download ENSCSEG00000007342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000007342	LARP4B	60	44.279	ENSCSEG00000003240	larp4ab	51	45.297
ENSCSEG00000007342	LARP4B	67	42.022	ENSCSEG00000001963	larp4aa	53	42.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007342	LARP4B	100	53.947	ENSG00000107929	LARP4B	100	53.614	Homo_sapiens
ENSCSEG00000007342	LARP4B	100	74.240	ENSAPOG00000020531	LARP4B	100	74.459	Acanthochromis_polyacanthus
ENSCSEG00000007342	LARP4B	92	55.380	ENSAMEG00000001810	LARP4B	100	53.113	Ailuropoda_melanoleuca
ENSCSEG00000007342	LARP4B	100	67.728	ENSAOCG00000007887	-	91	85.687	Amphiprion_ocellaris
ENSCSEG00000007342	LARP4B	94	70.793	ENSAPEG00000002512	LARP4B	93	70.654	Amphiprion_percula
ENSCSEG00000007342	LARP4B	100	67.179	ENSATEG00000012614	LARP4B	100	68.077	Anabas_testudineus
ENSCSEG00000007342	LARP4B	100	57.031	ENSAPLG00000003813	LARP4B	98	56.901	Anas_platyrhynchos
ENSCSEG00000007342	LARP4B	100	57.527	ENSACAG00000002858	LARP4B	100	57.392	Anolis_carolinensis
ENSCSEG00000007342	LARP4B	100	54.630	ENSANAG00000007531	-	100	54.497	Aotus_nancymaae
ENSCSEG00000007342	LARP4B	100	78.020	ENSACLG00000026356	LARP4B	100	78.020	Astatotilapia_calliptera
ENSCSEG00000007342	LARP4B	89	53.204	ENSAMXG00000003335	larp4b	92	53.055	Astyanax_mexicanus
ENSCSEG00000007342	LARP4B	100	55.404	ENSBTAG00000013899	LARP4B	100	55.267	Bos_taurus
ENSCSEG00000007342	LARP4B	100	54.222	ENSCJAG00000018434	LARP4B	100	54.090	Callithrix_jacchus
ENSCSEG00000007342	LARP4B	100	53.386	ENSCAFG00020004209	LARP4B	100	53.633	Canis_lupus_dingo
ENSCSEG00000007342	LARP4B	97	55.224	ENSCHIG00000013543	LARP4B	98	55.088	Capra_hircus
ENSCSEG00000007342	LARP4B	88	59.869	ENSTSYG00000002568	LARP4B	100	59.706	Carlito_syrichta
ENSCSEG00000007342	LARP4B	88	57.095	ENSCAPG00000009725	LARP4B	82	56.926	Cavia_aperea
ENSCSEG00000007342	LARP4B	100	53.175	ENSCPOG00000009375	LARP4B	100	53.042	Cavia_porcellus
ENSCSEG00000007342	LARP4B	100	54.233	ENSCCAG00000024869	LARP4B	100	54.101	Cebus_capucinus
ENSCSEG00000007342	LARP4B	100	54.139	ENSCATG00000019750	LARP4B	100	54.008	Cercocebus_atys
ENSCSEG00000007342	LARP4B	100	54.953	ENSCLAG00000011570	LARP4B	100	54.521	Chinchilla_lanigera
ENSCSEG00000007342	LARP4B	66	75.758	ENSCHOG00000007831	-	58	75.758	Choloepus_hoffmanni
ENSCSEG00000007342	LARP4B	100	58.367	ENSCPBG00000017063	LARP4B	100	58.233	Chrysemys_picta_bellii
ENSCSEG00000007342	LARP4B	100	52.168	ENSCANG00000038021	LARP4B	100	52.037	Colobus_angolensis_palliatus
ENSCSEG00000007342	LARP4B	100	53.448	ENSCGRG00001022930	Larp4b	100	53.316	Cricetulus_griseus_chok1gshd
ENSCSEG00000007342	LARP4B	100	53.448	ENSCGRG00000006022	Larp4b	100	53.316	Cricetulus_griseus_crigri
ENSCSEG00000007342	LARP4B	100	81.928	ENSCVAG00000008910	LARP4B	100	72.943	Cyprinodon_variegatus
ENSCSEG00000007342	LARP4B	96	51.043	ENSDARG00000062146	larp4b	98	50.759	Danio_rerio
ENSCSEG00000007342	LARP4B	96	53.531	ENSDNOG00000045543	-	100	60.792	Dasypus_novemcinctus
ENSCSEG00000007342	LARP4B	100	51.798	ENSDORG00000009328	Larp4b	100	51.664	Dipodomys_ordii
ENSCSEG00000007342	LARP4B	86	55.425	ENSETEG00000011249	LARP4B	90	55.425	Echinops_telfairi
ENSCSEG00000007342	LARP4B	100	52.988	ENSEASG00005019068	-	100	53.501	Equus_asinus_asinus
ENSCSEG00000007342	LARP4B	100	53.121	ENSECAG00000024040	LARP4B	100	53.633	Equus_caballus
ENSCSEG00000007342	LARP4B	92	56.205	ENSEEUG00000008391	LARP4B	98	54.211	Erinaceus_europaeus
ENSCSEG00000007342	LARP4B	100	61.795	ENSELUG00000008626	LARP4B	100	62.179	Esox_lucius
ENSCSEG00000007342	LARP4B	88	42.424	ENSELUG00000001417	-	94	42.584	Esox_lucius
ENSCSEG00000007342	LARP4B	100	52.918	ENSFCAG00000000721	-	100	53.113	Felis_catus
ENSCSEG00000007342	LARP4B	100	59.195	ENSFALG00000006961	LARP4B	100	59.060	Ficedula_albicollis
ENSCSEG00000007342	LARP4B	100	54.172	ENSFDAG00000006158	LARP4B	97	54.040	Fukomys_damarensis
ENSCSEG00000007342	LARP4B	100	65.432	ENSFHEG00000013037	LARP4B	100	65.753	Fundulus_heteroclitus
ENSCSEG00000007342	LARP4B	50	43.370	ENSFHEG00000011539	-	79	43.213	Fundulus_heteroclitus
ENSCSEG00000007342	LARP4B	85	61.526	ENSGMOG00000010818	-	90	76.702	Gadus_morhua
ENSCSEG00000007342	LARP4B	100	57.600	ENSGALG00000006672	LARP4B	100	57.467	Gallus_gallus
ENSCSEG00000007342	LARP4B	100	68.264	ENSGACG00000017535	LARP4B	98	68.264	Gasterosteus_aculeatus
ENSCSEG00000007342	LARP4B	88	63.622	ENSGAGG00000008598	LARP4B	87	63.458	Gopherus_agassizii
ENSCSEG00000007342	LARP4B	100	53.947	ENSGGOG00000003572	LARP4B	100	53.614	Gorilla_gorilla
ENSCSEG00000007342	LARP4B	100	75.800	ENSHBUG00000007535	LARP4B	100	75.800	Haplochromis_burtoni
ENSCSEG00000007342	LARP4B	100	53.755	ENSHGLG00000012936	LARP4B	100	53.623	Heterocephalus_glaber_female
ENSCSEG00000007342	LARP4B	86	50.245	ENSHGLG00100017261	-	100	50.082	Heterocephalus_glaber_male
ENSCSEG00000007342	LARP4B	100	53.765	ENSHGLG00100016220	-	100	53.633	Heterocephalus_glaber_male
ENSCSEG00000007342	LARP4B	99	71.810	ENSHCOG00000011581	LARP4B	89	71.810	Hippocampus_comes
ENSCSEG00000007342	LARP4B	94	51.920	ENSIPUG00000009705	larp4b	96	51.636	Ictalurus_punctatus
ENSCSEG00000007342	LARP4B	100	56.327	ENSSTOG00000000587	LARP4B	100	56.190	Ictidomys_tridecemlineatus
ENSCSEG00000007342	LARP4B	100	53.897	ENSJJAG00000020847	Larp4b	100	53.765	Jaculus_jaculus
ENSCSEG00000007342	LARP4B	100	73.677	ENSKMAG00000021674	LARP4B	100	73.677	Kryptolebias_marmoratus
ENSCSEG00000007342	LARP4B	77	71.252	ENSLBEG00000025293	-	78	71.252	Labrus_bergylta
ENSCSEG00000007342	LARP4B	88	60.680	ENSLACG00000009492	LARP4B	87	61.031	Latimeria_chalumnae
ENSCSEG00000007342	LARP4B	100	60.425	ENSLOCG00000012290	larp4b	100	61.089	Lepisosteus_oculatus
ENSCSEG00000007342	LARP4B	100	53.281	ENSLAFG00000015334	LARP4B	100	53.150	Loxodonta_africana
ENSCSEG00000007342	LARP4B	100	54.271	ENSMFAG00000001766	LARP4B	100	52.037	Macaca_fascicularis
ENSCSEG00000007342	LARP4B	100	54.271	ENSMMUG00000005279	LARP4B	100	54.008	Macaca_mulatta
ENSCSEG00000007342	LARP4B	100	54.139	ENSMNEG00000014019	LARP4B	100	51.905	Macaca_nemestrina
ENSCSEG00000007342	LARP4B	100	54.534	ENSMLEG00000035198	LARP4B	100	53.987	Mandrillus_leucophaeus
ENSCSEG00000007342	LARP4B	100	86.420	ENSMAMG00000013742	LARP4B	92	86.420	Mastacembelus_armatus
ENSCSEG00000007342	LARP4B	93	68.038	ENSMZEG00005014594	-	100	68.038	Maylandia_zebra
ENSCSEG00000007342	LARP4B	100	74.631	ENSMZEG00005006498	-	89	86.706	Maylandia_zebra
ENSCSEG00000007342	LARP4B	100	56.250	ENSMGAG00000005472	LARP4B	100	56.120	Meleagris_gallopavo
ENSCSEG00000007342	LARP4B	100	53.219	ENSMAUG00000021657	Larp4b	100	53.088	Mesocricetus_auratus
ENSCSEG00000007342	LARP4B	100	56.944	ENSMICG00000001301	LARP4B	100	57.083	Microcebus_murinus
ENSCSEG00000007342	LARP4B	100	51.565	ENSMOCG00000021452	Larp4b	100	51.973	Microtus_ochrogaster
ENSCSEG00000007342	LARP4B	100	71.596	ENSMMOG00000011253	-	100	71.596	Mola_mola
ENSCSEG00000007342	LARP4B	100	55.007	ENSMODG00000005957	LARP4B	100	54.873	Monodelphis_domestica
ENSCSEG00000007342	LARP4B	100	71.257	ENSMALG00000012432	LARP4B	100	71.257	Monopterus_albus
ENSCSEG00000007342	LARP4B	100	53.977	MGP_CAROLIEiJ_G0018216	Larp4b	100	53.716	Mus_caroli
ENSCSEG00000007342	LARP4B	100	54.391	ENSMUSG00000033499	Larp4b	100	54.128	Mus_musculus
ENSCSEG00000007342	LARP4B	100	54.008	MGP_PahariEiJ_G0019266	Larp4b	100	53.876	Mus_pahari
ENSCSEG00000007342	LARP4B	100	54.260	MGP_SPRETEiJ_G0019074	Larp4b	100	53.997	Mus_spretus
ENSCSEG00000007342	LARP4B	92	56.034	ENSMPUG00000016220	LARP4B	97	53.907	Mustela_putorius_furo
ENSCSEG00000007342	LARP4B	87	56.299	ENSMLUG00000005880	LARP4B	99	54.885	Myotis_lucifugus
ENSCSEG00000007342	LARP4B	100	54.331	ENSNGAG00000001750	Larp4b	100	54.391	Nannospalax_galili
ENSCSEG00000007342	LARP4B	100	67.294	ENSNBRG00000020018	LARP4B	100	67.294	Neolamprologus_brichardi
ENSCSEG00000007342	LARP4B	100	54.271	ENSNLEG00000013442	LARP4B	100	54.008	Nomascus_leucogenys
ENSCSEG00000007342	LARP4B	81	42.913	ENSMEUG00000013114	-	83	44.048	Notamacropus_eugenii
ENSCSEG00000007342	LARP4B	100	51.575	ENSOPRG00000003300	LARP4B	100	51.832	Ochotona_princeps
ENSCSEG00000007342	LARP4B	100	49.406	ENSODEG00000001109	LARP4B	100	49.273	Octodon_degus
ENSCSEG00000007342	LARP4B	100	70.103	ENSONIG00000017705	LARP4B	100	68.814	Oreochromis_niloticus
ENSCSEG00000007342	LARP4B	100	55.059	ENSOANG00000006100	LARP4B	100	55.059	Ornithorhynchus_anatinus
ENSCSEG00000007342	LARP4B	100	52.168	ENSOCUG00000004950	LARP4B	97	52.041	Oryctolagus_cuniculus
ENSCSEG00000007342	LARP4B	100	66.624	ENSORLG00000006080	LARP4B	100	66.624	Oryzias_latipes
ENSCSEG00000007342	LARP4B	100	72.184	ENSORLG00020020940	LARP4B	100	72.184	Oryzias_latipes_hni
ENSCSEG00000007342	LARP4B	100	72.524	ENSORLG00015020608	LARP4B	100	72.524	Oryzias_latipes_hsok
ENSCSEG00000007342	LARP4B	77	81.548	ENSOMEG00000019619	LARP4B	100	71.089	Oryzias_melastigma
ENSCSEG00000007342	LARP4B	96	54.749	ENSOGAG00000011540	LARP4B	99	54.609	Otolemur_garnettii
ENSCSEG00000007342	LARP4B	100	54.485	ENSOARG00000015320	LARP4B	98	54.354	Ovis_aries
ENSCSEG00000007342	LARP4B	100	54.079	ENSPPAG00000039232	LARP4B	100	53.745	Pan_paniscus
ENSCSEG00000007342	LARP4B	100	53.059	ENSPPRG00000009489	LARP4B	100	53.254	Panthera_pardus
ENSCSEG00000007342	LARP4B	100	53.191	ENSPTIG00000008543	LARP4B	100	53.386	Panthera_tigris_altaica
ENSCSEG00000007342	LARP4B	100	54.079	ENSPTRG00000002235	LARP4B	100	53.745	Pan_troglodytes
ENSCSEG00000007342	LARP4B	100	54.271	ENSPANG00000023546	LARP4B	100	52.037	Papio_anubis
ENSCSEG00000007342	LARP4B	99	56.556	ENSPKIG00000012368	LARP4B	99	56.821	Paramormyrops_kingsleyae
ENSCSEG00000007342	LARP4B	76	67.702	ENSPSIG00000005600	LARP4B	99	67.391	Pelodiscus_sinensis
ENSCSEG00000007342	LARP4B	96	65.037	ENSPMGG00000008261	LARP4B	90	64.889	Periophthalmus_magnuspinnatus
ENSCSEG00000007342	LARP4B	100	53.104	ENSPEMG00000014052	Larp4b	100	52.972	Peromyscus_maniculatus_bairdii
ENSCSEG00000007342	LARP4B	77	76.325	ENSPFOG00000000029	LARP4B	100	67.738	Poecilia_formosa
ENSCSEG00000007342	LARP4B	100	74.893	ENSPLAG00000002871	LARP4B	100	75.710	Poecilia_latipinna
ENSCSEG00000007342	LARP4B	77	84.479	ENSPMEG00000016361	LARP4B	100	73.370	Poecilia_mexicana
ENSCSEG00000007342	LARP4B	100	53.675	ENSPPYG00000002035	LARP4B	97	53.543	Pongo_abelii
ENSCSEG00000007342	LARP4B	100	55.080	ENSPCOG00000014688	LARP4B	100	54.947	Propithecus_coquereli
ENSCSEG00000007342	LARP4B	88	55.212	ENSPVAG00000009784	LARP4B	83	55.049	Pteropus_vampyrus
ENSCSEG00000007342	LARP4B	100	75.867	ENSPNYG00000024252	LARP4B	100	75.867	Pundamilia_nyererei
ENSCSEG00000007342	LARP4B	93	52.950	ENSPNAG00000028956	larp4b	97	52.806	Pygocentrus_nattereri
ENSCSEG00000007342	LARP4B	99	53.369	ENSRNOG00000015888	Larp4b	100	53.236	Rattus_norvegicus
ENSCSEG00000007342	LARP4B	100	53.846	ENSRBIG00000033294	LARP4B	100	53.585	Rhinopithecus_bieti
ENSCSEG00000007342	LARP4B	100	54.319	ENSRROG00000033879	LARP4B	100	53.585	Rhinopithecus_roxellana
ENSCSEG00000007342	LARP4B	100	50.000	ENSSBOG00000021109	LARP4B	100	49.868	Saimiri_boliviensis_boliviensis
ENSCSEG00000007342	LARP4B	100	55.839	ENSSHAG00000013392	LARP4B	100	56.622	Sarcophilus_harrisii
ENSCSEG00000007342	LARP4B	96	55.216	ENSSFOG00015003256	LARP4B	93	55.570	Scleropages_formosus
ENSCSEG00000007342	LARP4B	100	70.451	ENSSMAG00000005982	-	95	77.722	Scophthalmus_maximus
ENSCSEG00000007342	LARP4B	100	76.356	ENSSDUG00000006704	LARP4B	100	77.051	Seriola_dumerili
ENSCSEG00000007342	LARP4B	100	75.842	ENSSLDG00000020660	LARP4B	100	75.842	Seriola_lalandi_dorsalis
ENSCSEG00000007342	LARP4B	69	85.981	ENSSARG00000001243	-	79	85.981	Sorex_araneus
ENSCSEG00000007342	LARP4B	100	62.248	ENSSPUG00000002102	-	100	62.104	Sphenodon_punctatus
ENSCSEG00000007342	LARP4B	100	58.849	ENSSPUG00000013734	-	100	58.705	Sphenodon_punctatus
ENSCSEG00000007342	LARP4B	100	75.182	ENSSPAG00000014628	LARP4B	100	75.073	Stegastes_partitus
ENSCSEG00000007342	LARP4B	100	54.328	ENSSSCG00000011162	LARP4B	100	54.545	Sus_scrofa
ENSCSEG00000007342	LARP4B	100	57.754	ENSTGUG00000000811	-	100	57.754	Taeniopygia_guttata
ENSCSEG00000007342	LARP4B	99	66.234	ENSTNIG00000007991	LARP4B	99	66.954	Tetraodon_nigroviridis
ENSCSEG00000007342	LARP4B	100	68.105	ENSTNIG00000004571	-	98	68.366	Tetraodon_nigroviridis
ENSCSEG00000007342	LARP4B	77	60.274	ENSTTRG00000011151	LARP4B	84	59.761	Tursiops_truncatus
ENSCSEG00000007342	LARP4B	85	56.098	ENSUAMG00000016461	LARP4B	95	55.945	Ursus_americanus
ENSCSEG00000007342	LARP4B	92	55.524	ENSUMAG00000016127	LARP4B	100	53.369	Ursus_maritimus
ENSCSEG00000007342	LARP4B	50	85.475	ENSVPAG00000000128	-	62	85.475	Vicugna_pacos
ENSCSEG00000007342	LARP4B	100	53.316	ENSVVUG00000008641	LARP4B	100	53.369	Vulpes_vulpes
ENSCSEG00000007342	LARP4B	99	57.739	ENSXETG00000016882	larp4b	99	57.873	Xenopus_tropicalis
ENSCSEG00000007342	LARP4B	100	67.166	ENSXCOG00000019952	LARP4B	100	67.166	Xiphophorus_couchianus
ENSCSEG00000007342	LARP4B	100	72.981	ENSXMAG00000021533	LARP4B	100	72.702	Xiphophorus_maculatus