EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007352 (Gene tree)
Gene ID: 103396823
Gene Symbol: gtpbp4
Alias: GTP binding protein NGB|fi28d07|wu:fi28d07|zgc:55757
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5727 bases
Position: chr20:15165313-15171039
Accession: 103396823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000011443	NOG1	PF06858.14	2e-27	1	1
ENSCSEP00000011443	MMR_HSR1	PF01926.23	1.9e-19	1	1
ENSCSEP00000011443	NOGCT	PF08155.11	8.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000011583	-	1815	XM_008335056	ENSCSEP00000011443	604 (aa)	XP_008333278	-

Gene Model

Click here to download ENSCSEG00000007352's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007352	gtpbp4	100	78.076	ENSG00000107937	GTPBP4	100	95.000	Homo_sapiens
ENSCSEG00000007352	gtpbp4	100	86.751	ENSAPOG00000020433	gtpbp4	100	82.835	Acanthochromis_polyacanthus
ENSCSEG00000007352	gtpbp4	100	77.918	ENSAMEG00000001845	GTPBP4	100	77.918	Ailuropoda_melanoleuca
ENSCSEG00000007352	gtpbp4	100	90.397	ENSACIG00000018629	gtpbp4	100	90.397	Amphilophus_citrinellus
ENSCSEG00000007352	gtpbp4	100	87.066	ENSAOCG00000000427	gtpbp4	100	82.285	Amphiprion_ocellaris
ENSCSEG00000007352	gtpbp4	100	87.224	ENSAPEG00000002544	gtpbp4	100	87.224	Amphiprion_percula
ENSCSEG00000007352	gtpbp4	100	89.432	ENSATEG00000012635	gtpbp4	95	89.432	Anabas_testudineus
ENSCSEG00000007352	gtpbp4	52	71.698	ENSAPLG00000013790	-	96	71.698	Anas_platyrhynchos
ENSCSEG00000007352	gtpbp4	100	79.653	ENSACAG00000002943	GTPBP4	100	79.653	Anolis_carolinensis
ENSCSEG00000007352	gtpbp4	98	70.333	ENSANAG00000022188	-	99	70.833	Aotus_nancymaae
ENSCSEG00000007352	gtpbp4	88	78.744	ENSANAG00000029209	-	100	78.744	Aotus_nancymaae
ENSCSEG00000007352	gtpbp4	69	87.946	ENSACLG00000026330	gtpbp4	92	96.667	Astatotilapia_calliptera
ENSCSEG00000007352	gtpbp4	100	87.748	ENSAMXG00000019771	gtpbp4	100	87.748	Astyanax_mexicanus
ENSCSEG00000007352	gtpbp4	100	78.391	ENSBTAG00000014917	GTPBP4	100	78.391	Bos_taurus
ENSCSEG00000007352	gtpbp4	99	51.375	WBGene00020297	nog-1	97	70.968	Caenorhabditis_elegans
ENSCSEG00000007352	gtpbp4	100	77.987	ENSCJAG00000008494	-	100	78.145	Callithrix_jacchus
ENSCSEG00000007352	gtpbp4	100	77.201	ENSCJAG00000022962	-	100	77.358	Callithrix_jacchus
ENSCSEG00000007352	gtpbp4	92	77.002	ENSCAFG00000005536	GTPBP4	100	77.172	Canis_familiaris
ENSCSEG00000007352	gtpbp4	100	77.760	ENSCAFG00020004307	GTPBP4	100	77.918	Canis_lupus_dingo
ENSCSEG00000007352	gtpbp4	100	78.233	ENSCHIG00000018346	GTPBP4	100	78.233	Capra_hircus
ENSCSEG00000007352	gtpbp4	100	81.291	ENSTSYG00000004977	GTPBP4	100	81.291	Carlito_syrichta
ENSCSEG00000007352	gtpbp4	98	68.960	ENSCAPG00000002134	GTPBP4	97	68.960	Cavia_aperea
ENSCSEG00000007352	gtpbp4	100	77.603	ENSCPOG00000013736	GTPBP4	100	77.603	Cavia_porcellus
ENSCSEG00000007352	gtpbp4	100	57.729	ENSCCAG00000030115	-	100	56.426	Cebus_capucinus
ENSCSEG00000007352	gtpbp4	99	82.030	ENSCCAG00000021627	-	92	82.363	Cebus_capucinus
ENSCSEG00000007352	gtpbp4	100	81.954	ENSCATG00000004303	GTPBP4	100	81.954	Cercocebus_atys
ENSCSEG00000007352	gtpbp4	100	78.707	ENSCLAG00000011323	GTPBP4	100	78.707	Chinchilla_lanigera
ENSCSEG00000007352	gtpbp4	100	78.233	ENSCSAG00000014097	GTPBP4	100	78.233	Chlorocebus_sabaeus
ENSCSEG00000007352	gtpbp4	96	82.749	ENSCHOG00000012602	GTPBP4	88	82.749	Choloepus_hoffmanni
ENSCSEG00000007352	gtpbp4	100	80.599	ENSCPBG00000008398	GTPBP4	100	80.599	Chrysemys_picta_bellii
ENSCSEG00000007352	gtpbp4	100	61.466	ENSCING00000001957	-	100	61.778	Ciona_intestinalis
ENSCSEG00000007352	gtpbp4	100	61.103	ENSCSAVG00000009793	-	97	79.801	Ciona_savignyi
ENSCSEG00000007352	gtpbp4	100	77.980	ENSCANG00000014168	GTPBP4	100	77.980	Colobus_angolensis_palliatus
ENSCSEG00000007352	gtpbp4	100	78.549	ENSCGRG00001013765	Gtpbp4	100	78.549	Cricetulus_griseus_chok1gshd
ENSCSEG00000007352	gtpbp4	100	78.549	ENSCGRG00000012171	Gtpbp4	100	78.549	Cricetulus_griseus_crigri
ENSCSEG00000007352	gtpbp4	100	91.722	ENSCVAG00000008993	gtpbp4	100	91.722	Cyprinodon_variegatus
ENSCSEG00000007352	gtpbp4	100	82.492	ENSDARG00000018961	gtpbp4	100	82.492	Danio_rerio
ENSCSEG00000007352	gtpbp4	65	69.647	ENSDNOG00000006746	GTPBP4	100	69.647	Dasypus_novemcinctus
ENSCSEG00000007352	gtpbp4	82	92.381	ENSDORG00000010884	Gtpbp4	96	92.381	Dipodomys_ordii
ENSCSEG00000007352	gtpbp4	100	57.187	FBgn0028473	Non1	100	57.187	Drosophila_melanogaster
ENSCSEG00000007352	gtpbp4	73	75.741	ENSETEG00000016840	-	71	75.741	Echinops_telfairi
ENSCSEG00000007352	gtpbp4	98	66.275	ENSEBUG00000010311	gtpbp4	99	63.926	Eptatretus_burgeri
ENSCSEG00000007352	gtpbp4	100	77.760	ENSEASG00005019082	GTPBP4	100	77.760	Equus_asinus_asinus
ENSCSEG00000007352	gtpbp4	100	81.457	ENSECAG00000001700	GTPBP4	91	94.000	Equus_caballus
ENSCSEG00000007352	gtpbp4	100	81.301	ENSEEUG00000009889	GTPBP4	91	81.301	Erinaceus_europaeus
ENSCSEG00000007352	gtpbp4	100	84.829	ENSELUG00000008578	gtpbp4	100	84.829	Esox_lucius
ENSCSEG00000007352	gtpbp4	100	78.076	ENSFCAG00000026213	GTPBP4	100	78.076	Felis_catus
ENSCSEG00000007352	gtpbp4	99	76.582	ENSFALG00000006971	GTPBP4	87	79.022	Ficedula_albicollis
ENSCSEG00000007352	gtpbp4	100	78.391	ENSFDAG00000000998	GTPBP4	100	78.391	Fukomys_damarensis
ENSCSEG00000007352	gtpbp4	100	91.887	ENSFHEG00000012922	gtpbp4	100	91.887	Fundulus_heteroclitus
ENSCSEG00000007352	gtpbp4	100	82.177	ENSGMOG00000016090	gtpbp4	100	82.177	Gadus_morhua
ENSCSEG00000007352	gtpbp4	100	79.338	ENSGALG00000006703	GTPBP4	100	79.338	Gallus_gallus
ENSCSEG00000007352	gtpbp4	100	92.715	ENSGAFG00000002075	gtpbp4	100	92.715	Gambusia_affinis
ENSCSEG00000007352	gtpbp4	100	86.751	ENSGACG00000017481	gtpbp4	100	86.751	Gasterosteus_aculeatus
ENSCSEG00000007352	gtpbp4	92	79.557	ENSGAGG00000018689	GTPBP4	100	79.557	Gopherus_agassizii
ENSCSEG00000007352	gtpbp4	100	81.954	ENSGGOG00000013372	GTPBP4	100	81.954	Gorilla_gorilla
ENSCSEG00000007352	gtpbp4	100	92.384	ENSHBUG00000000192	gtpbp4	100	92.384	Haplochromis_burtoni
ENSCSEG00000007352	gtpbp4	100	78.391	ENSHGLG00000013071	GTPBP4	100	78.391	Heterocephalus_glaber_female
ENSCSEG00000007352	gtpbp4	100	78.391	ENSHGLG00100017850	GTPBP4	100	78.391	Heterocephalus_glaber_male
ENSCSEG00000007352	gtpbp4	100	72.568	ENSHGLG00100002964	-	100	72.568	Heterocephalus_glaber_male
ENSCSEG00000007352	gtpbp4	100	88.760	ENSHCOG00000011543	gtpbp4	100	88.760	Hippocampus_comes
ENSCSEG00000007352	gtpbp4	100	86.093	ENSIPUG00000014417	GTPBP4	100	86.093	Ictalurus_punctatus
ENSCSEG00000007352	gtpbp4	100	78.549	ENSSTOG00000010042	-	100	78.549	Ictidomys_tridecemlineatus
ENSCSEG00000007352	gtpbp4	100	70.505	ENSSTOG00000023023	-	100	70.505	Ictidomys_tridecemlineatus
ENSCSEG00000007352	gtpbp4	100	77.287	ENSJJAG00000010021	Gtpbp4	100	77.287	Jaculus_jaculus
ENSCSEG00000007352	gtpbp4	100	86.435	ENSKMAG00000021705	gtpbp4	100	86.435	Kryptolebias_marmoratus
ENSCSEG00000007352	gtpbp4	100	90.579	ENSLBEG00000021419	gtpbp4	100	90.579	Labrus_bergylta
ENSCSEG00000007352	gtpbp4	100	80.599	ENSLACG00000001449	GTPBP4	100	80.599	Latimeria_chalumnae
ENSCSEG00000007352	gtpbp4	100	81.385	ENSLOCG00000012279	gtpbp4	100	81.385	Lepisosteus_oculatus
ENSCSEG00000007352	gtpbp4	100	78.233	ENSLAFG00000018578	GTPBP4	100	78.233	Loxodonta_africana
ENSCSEG00000007352	gtpbp4	100	82.119	ENSMFAG00000046251	GTPBP4	100	82.119	Macaca_fascicularis
ENSCSEG00000007352	gtpbp4	100	78.974	ENSMMUG00000010813	GTPBP4	100	78.974	Macaca_mulatta
ENSCSEG00000007352	gtpbp4	100	81.954	ENSMNEG00000044366	GTPBP4	100	81.954	Macaca_nemestrina
ENSCSEG00000007352	gtpbp4	100	81.788	ENSMLEG00000039605	GTPBP4	100	81.788	Mandrillus_leucophaeus
ENSCSEG00000007352	gtpbp4	100	87.855	ENSMAMG00000013763	gtpbp4	92	87.855	Mastacembelus_armatus
ENSCSEG00000007352	gtpbp4	100	92.550	ENSMZEG00005006621	gtpbp4	100	92.550	Maylandia_zebra
ENSCSEG00000007352	gtpbp4	100	78.391	ENSMAUG00000000571	Gtpbp4	100	78.391	Mesocricetus_auratus
ENSCSEG00000007352	gtpbp4	100	81.954	ENSMICG00000013332	GTPBP4	100	81.954	Microcebus_murinus
ENSCSEG00000007352	gtpbp4	100	78.549	ENSMOCG00000002209	Gtpbp4	100	78.549	Microtus_ochrogaster
ENSCSEG00000007352	gtpbp4	100	91.391	ENSMMOG00000011257	gtpbp4	100	91.391	Mola_mola
ENSCSEG00000007352	gtpbp4	100	79.968	ENSMODG00000005978	GTPBP4	100	80.126	Monodelphis_domestica
ENSCSEG00000007352	gtpbp4	97	92.687	ENSMALG00000012488	gtpbp4	99	92.687	Monopterus_albus
ENSCSEG00000007352	gtpbp4	99	77.215	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	77.215	Mus_caroli
ENSCSEG00000007352	gtpbp4	100	78.549	ENSMUSG00000021149	Gtpbp4	91	93.960	Mus_musculus
ENSCSEG00000007352	gtpbp4	100	78.076	MGP_PahariEiJ_G0019265	Gtpbp4	100	78.076	Mus_pahari
ENSCSEG00000007352	gtpbp4	99	78.481	MGP_SPRETEiJ_G0019073	Gtpbp4	100	78.481	Mus_spretus
ENSCSEG00000007352	gtpbp4	92	77.683	ENSMPUG00000016221	GTPBP4	100	77.683	Mustela_putorius_furo
ENSCSEG00000007352	gtpbp4	100	78.076	ENSMLUG00000028192	GTPBP4	100	78.076	Myotis_lucifugus
ENSCSEG00000007352	gtpbp4	100	78.707	ENSNGAG00000015364	Gtpbp4	100	78.707	Nannospalax_galili
ENSCSEG00000007352	gtpbp4	87	86.667	ENSNBRG00000019965	gtpbp4	86	86.667	Neolamprologus_brichardi
ENSCSEG00000007352	gtpbp4	100	82.119	ENSNLEG00000013495	GTPBP4	100	82.119	Nomascus_leucogenys
ENSCSEG00000007352	gtpbp4	62	81.250	ENSMEUG00000016215	-	71	81.250	Notamacropus_eugenii
ENSCSEG00000007352	gtpbp4	89	82.749	ENSOPRG00000008671	GTPBP4	86	82.749	Ochotona_princeps
ENSCSEG00000007352	gtpbp4	100	78.233	ENSODEG00000000962	-	100	78.233	Octodon_degus
ENSCSEG00000007352	gtpbp4	100	76.341	ENSODEG00000019152	-	100	76.341	Octodon_degus
ENSCSEG00000007352	gtpbp4	100	88.170	ENSONIG00000017707	gtpbp4	100	88.170	Oreochromis_niloticus
ENSCSEG00000007352	gtpbp4	99	76.582	ENSOANG00000006095	-	99	76.582	Ornithorhynchus_anatinus
ENSCSEG00000007352	gtpbp4	100	76.656	ENSOCUG00000016120	-	100	76.656	Oryctolagus_cuniculus
ENSCSEG00000007352	gtpbp4	57	73.351	ENSOCUG00000014716	-	100	73.351	Oryctolagus_cuniculus
ENSCSEG00000007352	gtpbp4	100	87.539	ENSORLG00000006151	gtpbp4	100	87.539	Oryzias_latipes
ENSCSEG00000007352	gtpbp4	100	87.539	ENSORLG00020020899	gtpbp4	100	87.539	Oryzias_latipes_hni
ENSCSEG00000007352	gtpbp4	100	87.382	ENSORLG00015020562	gtpbp4	100	87.382	Oryzias_latipes_hsok
ENSCSEG00000007352	gtpbp4	100	91.060	ENSOMEG00000019684	gtpbp4	100	91.060	Oryzias_melastigma
ENSCSEG00000007352	gtpbp4	100	78.233	ENSOGAG00000011941	GTPBP4	100	78.233	Otolemur_garnettii
ENSCSEG00000007352	gtpbp4	100	76.766	ENSOARG00000015047	GTPBP4	100	77.865	Ovis_aries
ENSCSEG00000007352	gtpbp4	100	82.119	ENSPPAG00000042066	GTPBP4	100	82.119	Pan_paniscus
ENSCSEG00000007352	gtpbp4	100	78.076	ENSPPRG00000009895	GTPBP4	100	78.076	Panthera_pardus
ENSCSEG00000007352	gtpbp4	100	78.233	ENSPTIG00000008569	GTPBP4	100	78.233	Panthera_tigris_altaica
ENSCSEG00000007352	gtpbp4	70	80.795	ENSPTRG00000002236	GTPBP4	86	81.250	Pan_troglodytes
ENSCSEG00000007352	gtpbp4	100	81.954	ENSPANG00000023543	GTPBP4	100	81.954	Papio_anubis
ENSCSEG00000007352	gtpbp4	100	82.965	ENSPKIG00000012301	gtpbp4	100	82.965	Paramormyrops_kingsleyae
ENSCSEG00000007352	gtpbp4	54	84.594	ENSPSIG00000005442	GTPBP4	93	84.594	Pelodiscus_sinensis
ENSCSEG00000007352	gtpbp4	100	82.880	ENSPMGG00000001462	gtpbp4	100	82.880	Periophthalmus_magnuspinnatus
ENSCSEG00000007352	gtpbp4	100	57.413	ENSPEMG00000012279	-	100	57.165	Peromyscus_maniculatus_bairdii
ENSCSEG00000007352	gtpbp4	100	78.076	ENSPEMG00000015091	-	100	78.076	Peromyscus_maniculatus_bairdii
ENSCSEG00000007352	gtpbp4	100	74.132	ENSPMAG00000000905	gtpbp4	100	74.132	Petromyzon_marinus
ENSCSEG00000007352	gtpbp4	100	79.495	ENSPCIG00000026082	GTPBP4	100	79.495	Phascolarctos_cinereus
ENSCSEG00000007352	gtpbp4	100	87.855	ENSPFOG00000000026	gtpbp4	100	87.855	Poecilia_formosa
ENSCSEG00000007352	gtpbp4	92	87.863	ENSPLAG00000002898	gtpbp4	97	88.144	Poecilia_latipinna
ENSCSEG00000007352	gtpbp4	100	92.053	ENSPMEG00000016422	gtpbp4	100	92.053	Poecilia_mexicana
ENSCSEG00000007352	gtpbp4	100	91.887	ENSPREG00000019870	gtpbp4	100	91.887	Poecilia_reticulata
ENSCSEG00000007352	gtpbp4	100	78.391	ENSPPYG00000002037	GTPBP4	100	78.391	Pongo_abelii
ENSCSEG00000007352	gtpbp4	54	90.000	ENSPCAG00000006152	-	50	90.000	Procavia_capensis
ENSCSEG00000007352	gtpbp4	100	73.841	ENSPCOG00000014382	-	100	73.841	Propithecus_coquereli
ENSCSEG00000007352	gtpbp4	97	73.333	ENSPCOG00000014602	-	100	73.171	Propithecus_coquereli
ENSCSEG00000007352	gtpbp4	91	90.625	ENSPVAG00000005882	GTPBP4	81	90.625	Pteropus_vampyrus
ENSCSEG00000007352	gtpbp4	100	86.093	ENSPNYG00000024251	gtpbp4	100	86.093	Pundamilia_nyererei
ENSCSEG00000007352	gtpbp4	100	87.748	ENSPNAG00000019977	gtpbp4	100	87.748	Pygocentrus_nattereri
ENSCSEG00000007352	gtpbp4	100	77.358	ENSRNOG00000016217	Gtpbp4	100	77.516	Rattus_norvegicus
ENSCSEG00000007352	gtpbp4	100	81.788	ENSRBIG00000028875	GTPBP4	100	81.788	Rhinopithecus_bieti
ENSCSEG00000007352	gtpbp4	100	81.788	ENSRROG00000030798	GTPBP4	100	81.788	Rhinopithecus_roxellana
ENSCSEG00000007352	gtpbp4	99	44.668	YPL093W	-	99	44.668	Saccharomyces_cerevisiae
ENSCSEG00000007352	gtpbp4	100	81.848	ENSSBOG00000028421	GTPBP4	100	81.848	Saimiri_boliviensis_boliviensis
ENSCSEG00000007352	gtpbp4	99	79.777	ENSSHAG00000014713	GTPBP4	94	79.936	Sarcophilus_harrisii
ENSCSEG00000007352	gtpbp4	100	86.589	ENSSFOG00015003167	gtpbp4	100	86.589	Scleropages_formosus
ENSCSEG00000007352	gtpbp4	100	88.486	ENSSMAG00000005863	gtpbp4	100	88.486	Scophthalmus_maximus
ENSCSEG00000007352	gtpbp4	100	92.715	ENSSDUG00000006534	gtpbp4	100	92.715	Seriola_dumerili
ENSCSEG00000007352	gtpbp4	100	92.881	ENSSLDG00000020688	gtpbp4	100	92.881	Seriola_lalandi_dorsalis
ENSCSEG00000007352	gtpbp4	64	97.030	ENSSARG00000003409	-	79	97.030	Sorex_araneus
ENSCSEG00000007352	gtpbp4	100	78.864	ENSSPUG00000002153	GTPBP4	100	78.864	Sphenodon_punctatus
ENSCSEG00000007352	gtpbp4	61	76.322	ENSSPAG00000014583	gtpbp4	100	76.322	Stegastes_partitus
ENSCSEG00000007352	gtpbp4	100	76.814	ENSSSCG00000028602	GTPBP4	100	76.814	Sus_scrofa
ENSCSEG00000007352	gtpbp4	99	76.274	ENSTGUG00000000820	GTPBP4	100	78.662	Taeniopygia_guttata
ENSCSEG00000007352	gtpbp4	100	89.570	ENSTRUG00000003900	gtpbp4	100	89.570	Takifugu_rubripes
ENSCSEG00000007352	gtpbp4	100	85.647	ENSTNIG00000007992	gtpbp4	100	85.647	Tetraodon_nigroviridis
ENSCSEG00000007352	gtpbp4	100	64.319	ENSTBEG00000003613	GTPBP4	100	64.319	Tupaia_belangeri
ENSCSEG00000007352	gtpbp4	100	72.969	ENSTTRG00000011163	GTPBP4	100	72.969	Tursiops_truncatus
ENSCSEG00000007352	gtpbp4	100	81.954	ENSUAMG00000013191	GTPBP4	100	81.954	Ursus_americanus
ENSCSEG00000007352	gtpbp4	92	77.172	ENSUMAG00000016138	GTPBP4	100	77.172	Ursus_maritimus
ENSCSEG00000007352	gtpbp4	100	77.760	ENSVVUG00000008608	GTPBP4	98	77.918	Vulpes_vulpes
ENSCSEG00000007352	gtpbp4	100	69.677	ENSXETG00000018097	gtpbp4	100	69.677	Xenopus_tropicalis
ENSCSEG00000007352	gtpbp4	100	81.005	ENSXCOG00000019953	gtpbp4	98	81.005	Xiphophorus_couchianus
ENSCSEG00000007352	gtpbp4	100	87.284	ENSXMAG00000006719	gtpbp4	100	87.284	Xiphophorus_maculatus