EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000007739 (Gene tree)
Gene ID: 103399552
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 417 bases
Position: chrKI939177.1:182-598
Accession: 103399552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000011992	RRM_5	PF13893.6	2.2e-07	1	1
ENSCSEP00000011992	RRM_1	PF00076.22	4.8e-32	1	2
ENSCSEP00000011992	RRM_1	PF00076.22	4.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012135	-	417	XM_008338227	ENSCSEP00000011992	138 (aa)	XP_008336449	UPI000495A258

Gene Model

Click here to download ENSCSEG00000007739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000007739	-	51	32.432	ENSCSEG00000006378	srsf7a	53	32.432
ENSCSEG00000007739	-	57	30.864	ENSCSEG00000001311	-	63	31.250
ENSCSEG00000007739	-	57	32.099	ENSCSEG00000002271	srsf3b	61	32.500
ENSCSEG00000007739	-	52	34.722	ENSCSEG00000019778	SRSF6	62	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007739	-	99	64.029	ENSAPOG00000012375	-	97	64.029	Acanthochromis_polyacanthus
ENSCSEG00000007739	-	99	65.468	ENSACIG00000016472	-	86	65.468	Amphilophus_citrinellus
ENSCSEG00000007739	-	99	64.748	ENSAOCG00000010907	-	97	64.748	Amphiprion_ocellaris
ENSCSEG00000007739	-	99	64.748	ENSAPEG00000009476	-	88	64.748	Amphiprion_percula
ENSCSEG00000007739	-	99	64.964	ENSATEG00000001912	-	90	64.964	Anabas_testudineus
ENSCSEG00000007739	-	99	67.626	ENSAMXG00000032121	rbm4.2	87	67.626	Astyanax_mexicanus
ENSCSEG00000007739	-	99	47.541	ENSCPBG00000023666	-	92	47.541	Chrysemys_picta_bellii
ENSCSEG00000007739	-	99	72.464	ENSDARG00000036386	rbm4.1	79	72.464	Danio_rerio
ENSCSEG00000007739	-	98	57.857	ENSEBUG00000007174	-	88	57.857	Eptatretus_burgeri
ENSCSEG00000007739	-	99	64.029	ENSFHEG00000003483	-	91	64.029	Fundulus_heteroclitus
ENSCSEG00000007739	-	99	69.784	ENSGAFG00000019301	-	91	69.784	Gambusia_affinis
ENSCSEG00000007739	-	99	47.541	ENSGAGG00000014558	-	92	47.541	Gopherus_agassizii
ENSCSEG00000007739	-	99	64.748	ENSHBUG00000011624	-	90	64.748	Haplochromis_burtoni
ENSCSEG00000007739	-	99	66.906	ENSHCOG00000011413	-	82	66.906	Hippocampus_comes
ENSCSEG00000007739	-	99	63.043	ENSLBEG00000019756	-	86	63.043	Labrus_bergylta
ENSCSEG00000007739	-	99	47.482	ENSLACG00000006343	zgc:77262	51	47.482	Latimeria_chalumnae
ENSCSEG00000007739	-	100	71.739	ENSLOCG00000002772	rbm4.1	93	71.739	Lepisosteus_oculatus
ENSCSEG00000007739	-	99	69.343	ENSMZEG00005028161	-	77	69.343	Maylandia_zebra
ENSCSEG00000007739	-	99	64.234	ENSMZEG00005028160	-	93	64.234	Maylandia_zebra
ENSCSEG00000007739	-	99	60.432	ENSMZEG00005009210	-	77	60.432	Maylandia_zebra
ENSCSEG00000007739	-	99	65.942	ENSMMOG00000020484	-	86	65.942	Mola_mola
ENSCSEG00000007739	-	99	64.748	ENSNBRG00000017763	-	90	64.748	Neolamprologus_brichardi
ENSCSEG00000007739	-	100	72.464	ENSPKIG00000020805	rbm4.1	85	72.464	Paramormyrops_kingsleyae
ENSCSEG00000007739	-	100	82.482	ENSPMGG00000004331	rbm4.1	93	82.482	Periophthalmus_magnuspinnatus
ENSCSEG00000007739	-	98	54.015	ENSPMAG00000003433	rbm4.2	70	54.015	Petromyzon_marinus
ENSCSEG00000007739	-	99	68.116	ENSPLAG00000018569	-	88	68.116	Poecilia_latipinna
ENSCSEG00000007739	-	99	68.116	ENSPMEG00000006278	-	88	68.116	Poecilia_mexicana
ENSCSEG00000007739	-	99	67.626	ENSPREG00000003764	-	57	67.626	Poecilia_reticulata
ENSCSEG00000007739	-	99	64.748	ENSPNYG00000004649	-	90	64.748	Pundamilia_nyererei
ENSCSEG00000007739	-	99	48.333	ENSSFOG00015018567	zgc:77262	89	48.333	Scleropages_formosus
ENSCSEG00000007739	-	99	65.468	ENSSMAG00000007575	-	90	65.468	Scophthalmus_maximus
ENSCSEG00000007739	-	99	69.784	ENSXCOG00000003730	-	86	69.784	Xiphophorus_couchianus