EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000007798 (Gene tree)
Gene ID: 103397324
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3162 bases
Position: chrZ:432715-435876
Accession: 103397324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012091	Glu-tRNAGln	PF02686.15	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012235	-	600	XM_008335543	ENSCSEP00000012091	199 (aa)	XP_008333765	-

Gene Model

Click here to download ENSCSEG00000007798's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG
csem01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000007798	gatc	94	77.540	ENSCSEG00000016618	-	99	77.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007798	gatc	50	60.000	ENSG00000257218	GATC	100	70.213	Homo_sapiens
ENSCSEG00000007798	gatc	53	53.774	ENSAMEG00000013298	-	78	53.774	Ailuropoda_melanoleuca
ENSCSEG00000007798	gatc	61	81.967	ENSAOCG00000014641	gatc	98	81.967	Amphiprion_ocellaris
ENSCSEG00000007798	gatc	93	63.918	ENSAPEG00000023411	gatc	99	63.918	Amphiprion_percula
ENSCSEG00000007798	gatc	50	61.000	ENSANAG00000034389	-	74	61.000	Aotus_nancymaae
ENSCSEG00000007798	gatc	93	62.632	ENSACLG00000026251	gatc	99	62.632	Astatotilapia_calliptera
ENSCSEG00000007798	gatc	82	66.061	ENSAMXG00000004252	gatc	71	66.061	Astyanax_mexicanus
ENSCSEG00000007798	gatc	50	54.000	ENSBTAG00000012791	GATC	74	54.000	Bos_taurus
ENSCSEG00000007798	gatc	61	38.525	WBGene00013433	Y66D12A.7	69	38.525	Caenorhabditis_elegans
ENSCSEG00000007798	gatc	50	61.000	ENSCJAG00000001183	-	55	61.000	Callithrix_jacchus
ENSCSEG00000007798	gatc	53	54.717	ENSCAFG00000010311	-	78	54.717	Canis_familiaris
ENSCSEG00000007798	gatc	53	54.717	ENSCAFG00020020606	-	78	54.717	Canis_lupus_dingo
ENSCSEG00000007798	gatc	50	54.000	ENSCHIG00000019423	-	74	54.000	Capra_hircus
ENSCSEG00000007798	gatc	50	59.000	ENSTSYG00000006845	-	74	59.000	Carlito_syrichta
ENSCSEG00000007798	gatc	50	61.000	ENSCCAG00000022235	-	74	61.000	Cebus_capucinus
ENSCSEG00000007798	gatc	50	60.000	ENSCATG00000038807	GATC	74	60.000	Cercocebus_atys
ENSCSEG00000007798	gatc	63	48.855	ENSCLAG00000011015	-	82	48.855	Chinchilla_lanigera
ENSCSEG00000007798	gatc	50	61.000	ENSCSAG00000002259	GATC	74	61.000	Chlorocebus_sabaeus
ENSCSEG00000007798	gatc	50	59.000	ENSCHOG00000009235	-	74	59.000	Choloepus_hoffmanni
ENSCSEG00000007798	gatc	64	57.480	ENSCPBG00000011342	-	67	57.480	Chrysemys_picta_bellii
ENSCSEG00000007798	gatc	50	60.000	ENSCANG00000031071	GATC	74	60.000	Colobus_angolensis_palliatus
ENSCSEG00000007798	gatc	92	65.241	ENSCVAG00000004364	gatc	99	65.241	Cyprinodon_variegatus
ENSCSEG00000007798	gatc	69	68.613	ENSDARG00000056855	gatc	74	68.613	Danio_rerio
ENSCSEG00000007798	gatc	53	53.846	ENSDNOG00000012593	-	65	52.778	Dasypus_novemcinctus
ENSCSEG00000007798	gatc	61	40.164	FBgn0064115	GatC	82	40.164	Drosophila_melanogaster
ENSCSEG00000007798	gatc	50	52.525	ENSETEG00000002604	-	73	52.525	Echinops_telfairi
ENSCSEG00000007798	gatc	50	59.000	ENSECAG00000011118	-	74	59.000	Equus_caballus
ENSCSEG00000007798	gatc	50	52.525	ENSEEUG00000011638	-	73	52.525	Erinaceus_europaeus
ENSCSEG00000007798	gatc	66	67.407	ENSELUG00000012608	gatc	77	78.095	Esox_lucius
ENSCSEG00000007798	gatc	53	53.774	ENSFCAG00000038718	-	78	53.774	Felis_catus
ENSCSEG00000007798	gatc	65	51.538	ENSFALG00000007564	-	81	51.538	Ficedula_albicollis
ENSCSEG00000007798	gatc	53	57.143	ENSFDAG00000018720	-	77	57.143	Fukomys_damarensis
ENSCSEG00000007798	gatc	92	64.865	ENSFHEG00000014992	GATC	99	64.865	Fundulus_heteroclitus
ENSCSEG00000007798	gatc	79	61.392	ENSGMOG00000008742	gatc	98	61.392	Gadus_morhua
ENSCSEG00000007798	gatc	53	59.434	ENSGALG00000007195	-	80	58.929	Gallus_gallus
ENSCSEG00000007798	gatc	61	79.508	ENSGAFG00000012801	gatc	77	79.508	Gambusia_affinis
ENSCSEG00000007798	gatc	93	61.140	ENSGACG00000008973	gatc	99	61.140	Gasterosteus_aculeatus
ENSCSEG00000007798	gatc	64	59.055	ENSGAGG00000016018	-	69	59.055	Gopherus_agassizii
ENSCSEG00000007798	gatc	93	62.632	ENSHBUG00000006827	gatc	99	62.632	Haplochromis_burtoni
ENSCSEG00000007798	gatc	53	56.604	ENSHGLG00000011394	GATC	78	56.604	Heterocephalus_glaber_female
ENSCSEG00000007798	gatc	53	54.717	ENSHGLG00100018850	-	77	54.717	Heterocephalus_glaber_male
ENSCSEG00000007798	gatc	63	73.810	ENSHCOG00000009209	gatc	98	73.810	Hippocampus_comes
ENSCSEG00000007798	gatc	64	73.228	ENSIPUG00000023072	gatc	59	73.228	Ictalurus_punctatus
ENSCSEG00000007798	gatc	54	55.556	ENSSTOG00000025740	-	71	55.556	Ictidomys_tridecemlineatus
ENSCSEG00000007798	gatc	64	72.441	ENSKMAG00000016476	gatc	98	72.441	Kryptolebias_marmoratus
ENSCSEG00000007798	gatc	93	63.978	ENSLBEG00000007603	gatc	99	63.978	Labrus_bergylta
ENSCSEG00000007798	gatc	62	57.258	ENSLACG00000018239	-	64	57.258	Latimeria_chalumnae
ENSCSEG00000007798	gatc	64	72.441	ENSLOCG00000004056	gatc	69	72.441	Lepisosteus_oculatus
ENSCSEG00000007798	gatc	50	60.000	ENSMFAG00000034197	GATC	74	60.000	Macaca_fascicularis
ENSCSEG00000007798	gatc	50	60.000	ENSMMUG00000046665	GATC	74	60.000	Macaca_mulatta
ENSCSEG00000007798	gatc	50	60.000	ENSMNEG00000034653	GATC	74	60.000	Macaca_nemestrina
ENSCSEG00000007798	gatc	50	61.000	ENSMLEG00000039862	GATC	74	61.000	Mandrillus_leucophaeus
ENSCSEG00000007798	gatc	87	65.318	ENSMAMG00000015851	gatc	92	65.318	Mastacembelus_armatus
ENSCSEG00000007798	gatc	93	62.632	ENSMZEG00005016072	gatc	99	62.632	Maylandia_zebra
ENSCSEG00000007798	gatc	53	59.434	ENSMGAG00000008733	-	100	59.434	Meleagris_gallopavo
ENSCSEG00000007798	gatc	50	59.000	ENSMICG00000008669	-	74	59.000	Microcebus_murinus
ENSCSEG00000007798	gatc	70	66.667	ENSMMOG00000017695	gatc	89	74.766	Mola_mola
ENSCSEG00000007798	gatc	52	56.311	ENSMODG00000003152	-	78	56.311	Monodelphis_domestica
ENSCSEG00000007798	gatc	63	53.488	MGP_PahariEiJ_G0024203	Gatc	82	53.488	Mus_pahari
ENSCSEG00000007798	gatc	53	54.717	ENSMPUG00000003183	-	78	54.717	Mustela_putorius_furo
ENSCSEG00000007798	gatc	93	62.632	ENSNBRG00000007810	gatc	99	62.632	Neolamprologus_brichardi
ENSCSEG00000007798	gatc	53	59.048	ENSNLEG00000015651	GATC	77	59.048	Nomascus_leucogenys
ENSCSEG00000007798	gatc	52	56.731	ENSMEUG00000004064	-	84	56.731	Notamacropus_eugenii
ENSCSEG00000007798	gatc	50	61.000	ENSOPRG00000004226	-	74	61.000	Ochotona_princeps
ENSCSEG00000007798	gatc	64	47.244	ENSODEG00000005919	-	85	47.244	Octodon_degus
ENSCSEG00000007798	gatc	64	80.769	ENSONIG00000013444	gatc	90	80.769	Oreochromis_niloticus
ENSCSEG00000007798	gatc	53	56.604	ENSOCUG00000009867	-	78	56.604	Oryctolagus_cuniculus
ENSCSEG00000007798	gatc	60	79.832	ENSORLG00000007156	gatc	98	79.832	Oryzias_latipes
ENSCSEG00000007798	gatc	82	65.896	ENSORLG00020014991	gatc	91	65.896	Oryzias_latipes_hni
ENSCSEG00000007798	gatc	70	76.259	ENSORLG00015003450	gatc	74	76.259	Oryzias_latipes_hsok
ENSCSEG00000007798	gatc	75	72.000	ENSOMEG00000002280	gatc	80	72.000	Oryzias_melastigma
ENSCSEG00000007798	gatc	53	55.660	ENSOGAG00000003850	-	97	55.660	Otolemur_garnettii
ENSCSEG00000007798	gatc	56	50.847	ENSOARG00000012338	-	91	50.847	Ovis_aries
ENSCSEG00000007798	gatc	50	60.000	ENSPPAG00000029164	GATC	74	60.000	Pan_paniscus
ENSCSEG00000007798	gatc	53	53.774	ENSPPRG00000000929	-	78	53.774	Panthera_pardus
ENSCSEG00000007798	gatc	53	53.774	ENSPTIG00000009889	-	78	53.774	Panthera_tigris_altaica
ENSCSEG00000007798	gatc	50	60.000	ENSPTRG00000049887	GATC	74	60.000	Pan_troglodytes
ENSCSEG00000007798	gatc	50	59.000	ENSPANG00000033975	GATC	74	59.000	Papio_anubis
ENSCSEG00000007798	gatc	84	56.287	ENSPKIG00000024856	gatc	84	56.287	Paramormyrops_kingsleyae
ENSCSEG00000007798	gatc	56	60.360	ENSPSIG00000011112	-	95	60.360	Pelodiscus_sinensis
ENSCSEG00000007798	gatc	64	78.906	ENSPMGG00000018829	gatc	82	78.906	Periophthalmus_magnuspinnatus
ENSCSEG00000007798	gatc	92	65.946	ENSPFOG00000011603	gatc	99	65.946	Poecilia_formosa
ENSCSEG00000007798	gatc	92	65.405	ENSPLAG00000002471	gatc	99	65.405	Poecilia_latipinna
ENSCSEG00000007798	gatc	92	65.405	ENSPMEG00000020958	gatc	99	65.405	Poecilia_mexicana
ENSCSEG00000007798	gatc	55	80.734	ENSPREG00000022256	gatc	74	80.734	Poecilia_reticulata
ENSCSEG00000007798	gatc	53	57.547	ENSPPYG00000005030	GATC	78	57.547	Pongo_abelii
ENSCSEG00000007798	gatc	50	57.000	ENSPCAG00000013864	-	74	57.000	Procavia_capensis
ENSCSEG00000007798	gatc	56	45.946	ENSPCOG00000015558	-	86	45.946	Propithecus_coquereli
ENSCSEG00000007798	gatc	93	62.632	ENSPNYG00000016015	gatc	99	62.632	Pundamilia_nyererei
ENSCSEG00000007798	gatc	64	70.866	ENSPNAG00000001239	gatc	72	60.479	Pygocentrus_nattereri
ENSCSEG00000007798	gatc	50	59.000	ENSRBIG00000033363	GATC	74	59.000	Rhinopithecus_bieti
ENSCSEG00000007798	gatc	50	59.000	ENSRROG00000042802	GATC	74	59.000	Rhinopithecus_roxellana
ENSCSEG00000007798	gatc	50	59.000	ENSSBOG00000033750	-	74	59.000	Saimiri_boliviensis_boliviensis
ENSCSEG00000007798	gatc	53	56.604	ENSSHAG00000005745	-	100	56.604	Sarcophilus_harrisii
ENSCSEG00000007798	gatc	62	69.919	ENSSFOG00015002508	gatc	86	63.971	Scleropages_formosus
ENSCSEG00000007798	gatc	93	67.742	ENSSMAG00000014280	gatc	99	67.742	Scophthalmus_maximus
ENSCSEG00000007798	gatc	93	64.767	ENSSDUG00000012206	gatc	99	64.767	Seriola_dumerili
ENSCSEG00000007798	gatc	93	64.767	ENSSLDG00000025159	gatc	97	64.767	Seriola_lalandi_dorsalis
ENSCSEG00000007798	gatc	60	54.622	ENSSPUG00000015693	-	72	59.000	Sphenodon_punctatus
ENSCSEG00000007798	gatc	93	62.632	ENSSPAG00000011860	gatc	99	62.632	Stegastes_partitus
ENSCSEG00000007798	gatc	54	59.259	ENSTGUG00000009561	-	100	59.259	Taeniopygia_guttata
ENSCSEG00000007798	gatc	65	75.385	ENSTRUG00000021596	gatc	95	60.000	Takifugu_rubripes
ENSCSEG00000007798	gatc	72	70.629	ENSTNIG00000015879	gatc	69	70.629	Tetraodon_nigroviridis
ENSCSEG00000007798	gatc	51	57.426	ENSTTRG00000000144	GATC	74	57.426	Tursiops_truncatus
ENSCSEG00000007798	gatc	53	54.717	ENSUAMG00000015523	-	78	54.717	Ursus_americanus
ENSCSEG00000007798	gatc	53	54.717	ENSVVUG00000021055	-	78	54.717	Vulpes_vulpes
ENSCSEG00000007798	gatc	55	79.817	ENSXCOG00000017087	gatc	80	79.817	Xiphophorus_couchianus
ENSCSEG00000007798	gatc	92	64.516	ENSXMAG00000018267	gatc	99	64.516	Xiphophorus_maculatus