EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007799 (Gene tree)
Gene ID: 103387368
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 11772 bases
Position: chr12:9735641-9747412
Accession: 103387368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012203	NUC173	PF08161.12	3.6e-73	1	1
ENSCSEP00000012165	NUC173	PF08161.12	4e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012308	-	7167	XM_008321967	ENSCSEP00000012165	1288 (aa)	XP_008320189	UPI00049534BC
ENSCSET00000012347	-	3762	-	ENSCSEP00000012203	1253 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000007799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007799	rrp12	92	72.727	ENSG00000052749	RRP12	100	78.462	Homo_sapiens
ENSCSEG00000007799	rrp12	99	82.906	ENSAPOG00000013355	rrp12	99	82.353	Acanthochromis_polyacanthus
ENSCSEG00000007799	rrp12	99	61.550	ENSAMEG00000000134	RRP12	99	62.135	Ailuropoda_melanoleuca
ENSCSEG00000007799	rrp12	99	85.101	ENSACIG00000022673	rrp12	99	85.116	Amphilophus_citrinellus
ENSCSEG00000007799	rrp12	99	85.803	ENSAOCG00000016149	rrp12	99	85.736	Amphiprion_ocellaris
ENSCSEG00000007799	rrp12	99	83.904	ENSAPEG00000016023	rrp12	99	82.831	Amphiprion_percula
ENSCSEG00000007799	rrp12	99	86.672	ENSATEG00000022627	rrp12	99	86.367	Anabas_testudineus
ENSCSEG00000007799	rrp12	97	59.095	ENSAPLG00000014387	RRP12	99	59.109	Anas_platyrhynchos
ENSCSEG00000007799	rrp12	99	59.907	ENSACAG00000002175	RRP12	99	59.537	Anolis_carolinensis
ENSCSEG00000007799	rrp12	92	72.727	ENSANAG00000037485	RRP12	99	72.549	Aotus_nancymaae
ENSCSEG00000007799	rrp12	99	84.399	ENSACLG00000007354	rrp12	99	84.341	Astatotilapia_calliptera
ENSCSEG00000007799	rrp12	100	74.748	ENSAMXG00000012852	rrp12	100	74.961	Astyanax_mexicanus
ENSCSEG00000007799	rrp12	99	61.905	ENSBTAG00000002191	RRP12	99	61.462	Bos_taurus
ENSCSEG00000007799	rrp12	85	60.163	ENSCJAG00000016549	-	99	60.091	Callithrix_jacchus
ENSCSEG00000007799	rrp12	99	61.762	ENSCAFG00000009043	RRP12	99	61.704	Canis_familiaris
ENSCSEG00000007799	rrp12	99	61.762	ENSCAFG00020005991	RRP12	99	61.704	Canis_lupus_dingo
ENSCSEG00000007799	rrp12	99	59.587	ENSCHIG00000011876	RRP12	99	59.160	Capra_hircus
ENSCSEG00000007799	rrp12	53	54.023	ENSTSYG00000030210	-	99	54.964	Carlito_syrichta
ENSCSEG00000007799	rrp12	96	56.105	ENSCAPG00000008991	RRP12	98	55.715	Cavia_aperea
ENSCSEG00000007799	rrp12	99	61.787	ENSCPOG00000004215	RRP12	99	61.343	Cavia_porcellus
ENSCSEG00000007799	rrp12	70	58.050	ENSCCAG00000033123	-	82	57.519	Cebus_capucinus
ENSCSEG00000007799	rrp12	81	64.662	ENSCCAG00000024088	RRP12	99	65.734	Cebus_capucinus
ENSCSEG00000007799	rrp12	99	57.296	ENSCATG00000045310	RRP12	99	57.462	Cercocebus_atys
ENSCSEG00000007799	rrp12	99	61.278	ENSCLAG00000003753	RRP12	99	61.064	Chinchilla_lanigera
ENSCSEG00000007799	rrp12	88	59.965	ENSCSAG00000005877	RRP12	99	60.017	Chlorocebus_sabaeus
ENSCSEG00000007799	rrp12	59	69.702	ENSCHOG00000003095	-	60	69.818	Choloepus_hoffmanni
ENSCSEG00000007799	rrp12	94	62.984	ENSCPBG00000011935	RRP12	97	62.624	Chrysemys_picta_bellii
ENSCSEG00000007799	rrp12	64	38.989	ENSCSAVG00000006059	-	99	39.048	Ciona_savignyi
ENSCSEG00000007799	rrp12	92	72.078	ENSCANG00000031653	RRP12	99	72.078	Colobus_angolensis_palliatus
ENSCSEG00000007799	rrp12	90	62.287	ENSCGRG00001004338	Rrp12	99	62.084	Cricetulus_griseus_chok1gshd
ENSCSEG00000007799	rrp12	99	61.806	ENSCGRG00000011965	Rrp12	99	61.467	Cricetulus_griseus_crigri
ENSCSEG00000007799	rrp12	99	83.607	ENSCVAG00000003418	rrp12	99	83.320	Cyprinodon_variegatus
ENSCSEG00000007799	rrp12	100	72.734	ENSDARG00000022410	rrp12	100	72.734	Danio_rerio
ENSCSEG00000007799	rrp12	99	61.586	ENSDNOG00000005120	RRP12	99	61.432	Dasypus_novemcinctus
ENSCSEG00000007799	rrp12	99	61.509	ENSDORG00000009199	Rrp12	99	61.740	Dipodomys_ordii
ENSCSEG00000007799	rrp12	91	64.000	ENSETEG00000002455	RRP12	92	63.514	Echinops_telfairi
ENSCSEG00000007799	rrp12	90	54.667	ENSEBUG00000006555	rrp12	99	54.667	Eptatretus_burgeri
ENSCSEG00000007799	rrp12	99	61.509	ENSEASG00005008693	RRP12	99	61.817	Equus_asinus_asinus
ENSCSEG00000007799	rrp12	94	61.066	ENSECAG00000010892	RRP12	99	61.393	Equus_caballus
ENSCSEG00000007799	rrp12	64	56.842	ENSEEUG00000005447	-	60	60.000	Erinaceus_europaeus
ENSCSEG00000007799	rrp12	99	77.149	ENSELUG00000010510	rrp12	100	77.034	Esox_lucius
ENSCSEG00000007799	rrp12	92	74.026	ENSFCAG00000028639	RRP12	99	73.856	Felis_catus
ENSCSEG00000007799	rrp12	94	61.450	ENSFALG00000008458	RRP12	99	61.500	Ficedula_albicollis
ENSCSEG00000007799	rrp12	99	61.402	ENSFDAG00000019108	RRP12	95	61.295	Fukomys_damarensis
ENSCSEG00000007799	rrp12	99	75.916	ENSFHEG00000004148	rrp12	99	75.213	Fundulus_heteroclitus
ENSCSEG00000007799	rrp12	96	74.400	ENSGMOG00000004188	rrp12	95	74.400	Gadus_morhua
ENSCSEG00000007799	rrp12	99	61.872	ENSGALG00000041331	RRP12	95	63.235	Gallus_gallus
ENSCSEG00000007799	rrp12	99	83.255	ENSGAFG00000009038	rrp12	99	83.023	Gambusia_affinis
ENSCSEG00000007799	rrp12	99	82.683	ENSGACG00000007175	rrp12	99	82.481	Gasterosteus_aculeatus
ENSCSEG00000007799	rrp12	67	65.629	ENSGAGG00000019169	RRP12	96	65.629	Gopherus_agassizii
ENSCSEG00000007799	rrp12	92	72.727	ENSGGOG00000014850	RRP12	99	72.727	Gorilla_gorilla
ENSCSEG00000007799	rrp12	99	84.477	ENSHBUG00000023527	rrp12	99	84.419	Haplochromis_burtoni
ENSCSEG00000007799	rrp12	99	61.740	ENSHGLG00000016772	RRP12	99	61.787	Heterocephalus_glaber_female
ENSCSEG00000007799	rrp12	99	61.740	ENSHGLG00100015110	RRP12	99	61.787	Heterocephalus_glaber_male
ENSCSEG00000007799	rrp12	99	79.441	ENSHCOG00000019519	rrp12	99	79.286	Hippocampus_comes
ENSCSEG00000007799	rrp12	99	73.684	ENSIPUG00000000311	RRP12	99	73.529	Ictalurus_punctatus
ENSCSEG00000007799	rrp12	99	62.606	ENSSTOG00000006515	RRP12	99	62.654	Ictidomys_tridecemlineatus
ENSCSEG00000007799	rrp12	96	61.489	ENSJJAG00000000110	Rrp12	99	61.489	Jaculus_jaculus
ENSCSEG00000007799	rrp12	99	83.894	ENSKMAG00000020621	rrp12	99	83.838	Kryptolebias_marmoratus
ENSCSEG00000007799	rrp12	100	80.713	ENSLBEG00000015335	rrp12	100	80.108	Labrus_bergylta
ENSCSEG00000007799	rrp12	73	64.815	ENSLACG00000016633	RRP12	81	65.056	Latimeria_chalumnae
ENSCSEG00000007799	rrp12	99	69.207	ENSLOCG00000003846	rrp12	99	68.952	Lepisosteus_oculatus
ENSCSEG00000007799	rrp12	99	62.193	ENSLAFG00000015965	RRP12	99	61.857	Loxodonta_africana
ENSCSEG00000007799	rrp12	92	71.429	ENSMFAG00000041558	RRP12	99	71.429	Macaca_fascicularis
ENSCSEG00000007799	rrp12	92	71.429	ENSMMUG00000019634	RRP12	99	71.429	Macaca_mulatta
ENSCSEG00000007799	rrp12	92	71.429	ENSMNEG00000036759	RRP12	99	71.429	Macaca_nemestrina
ENSCSEG00000007799	rrp12	92	70.779	ENSMLEG00000041317	RRP12	99	72.078	Mandrillus_leucophaeus
ENSCSEG00000007799	rrp12	99	83.997	ENSMAMG00000002964	rrp12	99	86.364	Mastacembelus_armatus
ENSCSEG00000007799	rrp12	99	84.399	ENSMZEG00005003241	rrp12	99	84.341	Maylandia_zebra
ENSCSEG00000007799	rrp12	99	60.000	ENSMGAG00000009829	RRP12	99	59.861	Meleagris_gallopavo
ENSCSEG00000007799	rrp12	99	60.370	ENSMAUG00000020743	Rrp12	99	59.846	Mesocricetus_auratus
ENSCSEG00000007799	rrp12	92	74.026	ENSMICG00000007624	RRP12	99	74.026	Microcebus_murinus
ENSCSEG00000007799	rrp12	99	62.173	ENSMOCG00000006753	Rrp12	99	62.096	Microtus_ochrogaster
ENSCSEG00000007799	rrp12	99	82.234	ENSMMOG00000010708	rrp12	99	81.691	Mola_mola
ENSCSEG00000007799	rrp12	99	62.519	ENSMODG00000004315	RRP12	99	62.568	Monodelphis_domestica
ENSCSEG00000007799	rrp12	99	78.538	ENSMALG00000016560	rrp12	99	84.237	Monopterus_albus
ENSCSEG00000007799	rrp12	99	61.162	MGP_CAROLIEiJ_G0022957	Rrp12	99	61.026	Mus_caroli
ENSCSEG00000007799	rrp12	99	61.787	ENSMUSG00000035049	Rrp12	99	61.864	Mus_musculus
ENSCSEG00000007799	rrp12	99	61.787	MGP_PahariEiJ_G0014447	Rrp12	99	61.864	Mus_pahari
ENSCSEG00000007799	rrp12	99	61.941	MGP_SPRETEiJ_G0023878	Rrp12	99	62.018	Mus_spretus
ENSCSEG00000007799	rrp12	99	61.645	ENSMPUG00000017046	RRP12	99	61.722	Mustela_putorius_furo
ENSCSEG00000007799	rrp12	99	61.686	ENSMLUG00000017160	RRP12	99	61.887	Myotis_lucifugus
ENSCSEG00000007799	rrp12	99	62.529	ENSNGAG00000024144	Rrp12	99	62.481	Nannospalax_galili
ENSCSEG00000007799	rrp12	99	83.151	ENSNBRG00000009987	rrp12	99	82.558	Neolamprologus_brichardi
ENSCSEG00000007799	rrp12	92	72.727	ENSNLEG00000013762	RRP12	99	72.727	Nomascus_leucogenys
ENSCSEG00000007799	rrp12	99	56.788	ENSMEUG00000003185	RRP12	99	56.599	Notamacropus_eugenii
ENSCSEG00000007799	rrp12	94	66.169	ENSOPRG00000005001	RRP12	94	66.169	Ochotona_princeps
ENSCSEG00000007799	rrp12	99	61.270	ENSODEG00000016439	RRP12	99	60.880	Octodon_degus
ENSCSEG00000007799	rrp12	99	84.633	ENSONIG00000009528	rrp12	99	84.961	Oreochromis_niloticus
ENSCSEG00000007799	rrp12	99	58.141	ENSOANG00000006560	RRP12	99	57.769	Ornithorhynchus_anatinus
ENSCSEG00000007799	rrp12	99	62.066	ENSOCUG00000005662	RRP12	99	61.931	Oryctolagus_cuniculus
ENSCSEG00000007799	rrp12	99	83.307	ENSORLG00000008688	rrp12	99	83.136	Oryzias_latipes
ENSCSEG00000007799	rrp12	98	83.320	ENSORLG00020002355	rrp12	99	83.082	Oryzias_latipes_hni
ENSCSEG00000007799	rrp12	99	83.307	ENSORLG00015006709	rrp12	99	83.101	Oryzias_latipes_hsok
ENSCSEG00000007799	rrp12	98	83.479	ENSOMEG00000002609	rrp12	99	83.241	Oryzias_melastigma
ENSCSEG00000007799	rrp12	99	61.733	ENSOGAG00000001626	RRP12	99	61.674	Otolemur_garnettii
ENSCSEG00000007799	rrp12	99	60.583	ENSOARG00000009681	RRP12	99	60.476	Ovis_aries
ENSCSEG00000007799	rrp12	92	72.727	ENSPPAG00000043885	RRP12	99	72.727	Pan_paniscus
ENSCSEG00000007799	rrp12	92	74.026	ENSPPRG00000002029	RRP12	99	73.856	Panthera_pardus
ENSCSEG00000007799	rrp12	92	74.026	ENSPTIG00000004428	RRP12	99	73.856	Panthera_tigris_altaica
ENSCSEG00000007799	rrp12	92	72.727	ENSPTRG00000002806	RRP12	99	72.727	Pan_troglodytes
ENSCSEG00000007799	rrp12	92	70.779	ENSPANG00000021360	RRP12	99	72.078	Papio_anubis
ENSCSEG00000007799	rrp12	99	72.089	ENSPKIG00000016516	rrp12	99	71.836	Paramormyrops_kingsleyae
ENSCSEG00000007799	rrp12	99	80.748	ENSPMGG00000020217	rrp12	99	80.015	Periophthalmus_magnuspinnatus
ENSCSEG00000007799	rrp12	99	62.741	ENSPEMG00000008437	Rrp12	99	62.404	Peromyscus_maniculatus_bairdii
ENSCSEG00000007799	rrp12	88	51.407	ENSPMAG00000007493	rrp12	88	51.407	Petromyzon_marinus
ENSCSEG00000007799	rrp12	96	71.667	ENSPCIG00000002157	RRP12	96	71.667	Phascolarctos_cinereus
ENSCSEG00000007799	rrp12	99	82.995	ENSPFOG00000014975	rrp12	99	82.636	Poecilia_formosa
ENSCSEG00000007799	rrp12	99	82.917	ENSPLAG00000009840	rrp12	99	82.558	Poecilia_latipinna
ENSCSEG00000007799	rrp12	99	82.995	ENSPMEG00000021871	rrp12	99	82.636	Poecilia_mexicana
ENSCSEG00000007799	rrp12	99	80.233	ENSPREG00000020950	rrp12	99	79.768	Poecilia_reticulata
ENSCSEG00000007799	rrp12	99	61.060	ENSPPYG00000002528	RRP12	99	60.769	Pongo_abelii
ENSCSEG00000007799	rrp12	94	74.860	ENSPCAG00000008967	RRP12	94	74.719	Procavia_capensis
ENSCSEG00000007799	rrp12	92	74.026	ENSPCOG00000014009	RRP12	99	74.026	Propithecus_coquereli
ENSCSEG00000007799	rrp12	99	58.955	ENSPVAG00000003370	RRP12	99	58.737	Pteropus_vampyrus
ENSCSEG00000007799	rrp12	99	84.711	ENSPNYG00000009451	rrp12	99	84.651	Pundamilia_nyererei
ENSCSEG00000007799	rrp12	99	74.166	ENSPNAG00000007658	rrp12	99	74.068	Pygocentrus_nattereri
ENSCSEG00000007799	rrp12	99	62.404	ENSRNOG00000048495	Rrp12	99	62.221	Rattus_norvegicus
ENSCSEG00000007799	rrp12	92	72.078	ENSRBIG00000021296	RRP12	99	72.078	Rhinopithecus_bieti
ENSCSEG00000007799	rrp12	92	72.078	ENSRROG00000032482	RRP12	99	72.078	Rhinopithecus_roxellana
ENSCSEG00000007799	rrp12	92	72.078	ENSSBOG00000030992	RRP12	100	72.078	Saimiri_boliviensis_boliviensis
ENSCSEG00000007799	rrp12	99	62.461	ENSSHAG00000018275	RRP12	99	62.229	Sarcophilus_harrisii
ENSCSEG00000007799	rrp12	99	74.592	ENSSFOG00015016400	rrp12	99	74.592	Scleropages_formosus
ENSCSEG00000007799	rrp12	99	87.099	ENSSMAG00000004047	rrp12	99	87.024	Scophthalmus_maximus
ENSCSEG00000007799	rrp12	99	88.507	ENSSDUG00000022871	rrp12	99	88.267	Seriola_dumerili
ENSCSEG00000007799	rrp12	99	88.194	ENSSLDG00000003038	rrp12	99	87.956	Seriola_lalandi_dorsalis
ENSCSEG00000007799	rrp12	99	60.712	ENSSPUG00000012221	RRP12	99	61.021	Sphenodon_punctatus
ENSCSEG00000007799	rrp12	99	86.661	ENSSPAG00000002261	rrp12	99	86.512	Stegastes_partitus
ENSCSEG00000007799	rrp12	99	61.479	ENSSSCG00000010514	RRP12	99	61.633	Sus_scrofa
ENSCSEG00000007799	rrp12	88	59.233	ENSTGUG00000009711	RRP12	99	58.936	Taeniopygia_guttata
ENSCSEG00000007799	rrp12	99	77.389	ENSTRUG00000012017	rrp12	99	76.845	Takifugu_rubripes
ENSCSEG00000007799	rrp12	99	82.595	ENSTNIG00000016522	rrp12	99	82.673	Tetraodon_nigroviridis
ENSCSEG00000007799	rrp12	77	73.529	ENSTBEG00000004907	RRP12	80	73.171	Tupaia_belangeri
ENSCSEG00000007799	rrp12	99	59.353	ENSTTRG00000009878	RRP12	99	59.136	Tursiops_truncatus
ENSCSEG00000007799	rrp12	99	61.656	ENSUAMG00000009092	RRP12	99	62.011	Ursus_americanus
ENSCSEG00000007799	rrp12	99	60.169	ENSUMAG00000021621	RRP12	99	60.139	Ursus_maritimus
ENSCSEG00000007799	rrp12	99	62.056	ENSVVUG00000023168	RRP12	99	61.997	Vulpes_vulpes
ENSCSEG00000007799	rrp12	99	65.116	ENSXETG00000003430	rrp12	99	65.039	Xenopus_tropicalis
ENSCSEG00000007799	rrp12	90	82.515	ENSXCOG00000012082	rrp12	96	82.496	Xiphophorus_couchianus
ENSCSEG00000007799	rrp12	99	83.073	ENSXMAG00000013498	rrp12	99	82.713	Xiphophorus_maculatus