EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007829 (Gene tree)
Gene ID: 103386264
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 39876 bases
Position: chr11:9954869-9994744
Accession: 103386264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012147	SHQ1	PF04925.15	1.1e-65	1	1
ENSCSEP00000012137	SHQ1	PF04925.15	1.1e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012280	-	3145	-	ENSCSEP00000012137	642 (aa)	-	-
ENSCSET00000012290	-	3922	XM_008320446	ENSCSEP00000012147	618 (aa)	XP_008318668	-

Gene Model

Click here to download ENSCSEG00000007829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007829	shq1	66	62.651	ENSG00000144736	SHQ1	96	79.167	Homo_sapiens
ENSCSEG00000007829	shq1	99	72.419	ENSAPOG00000000397	shq1	99	71.452	Acanthochromis_polyacanthus
ENSCSEG00000007829	shq1	91	52.316	ENSAMEG00000015140	SHQ1	72	62.440	Ailuropoda_melanoleuca
ENSCSEG00000007829	shq1	99	70.016	ENSACIG00000021249	shq1	99	68.882	Amphilophus_citrinellus
ENSCSEG00000007829	shq1	99	73.237	ENSAOCG00000023311	shq1	99	71.795	Amphiprion_ocellaris
ENSCSEG00000007829	shq1	99	72.392	ENSAPEG00000021686	shq1	99	70.947	Amphiprion_percula
ENSCSEG00000007829	shq1	99	72.195	ENSATEG00000008475	shq1	99	72.033	Anabas_testudineus
ENSCSEG00000007829	shq1	66	59.666	ENSAPLG00000013926	SHQ1	82	59.666	Anas_platyrhynchos
ENSCSEG00000007829	shq1	68	61.628	ENSACAG00000014809	SHQ1	63	61.358	Anolis_carolinensis
ENSCSEG00000007829	shq1	76	44.118	ENSANAG00000030500	-	69	44.226	Aotus_nancymaae
ENSCSEG00000007829	shq1	90	53.180	ENSANAG00000029241	SHQ1	72	61.005	Aotus_nancymaae
ENSCSEG00000007829	shq1	98	69.951	ENSACLG00000023077	shq1	97	69.243	Astatotilapia_calliptera
ENSCSEG00000007829	shq1	69	67.136	ENSAMXG00000043822	shq1	71	67.153	Astyanax_mexicanus
ENSCSEG00000007829	shq1	91	51.759	ENSBTAG00000005436	SHQ1	72	62.201	Bos_taurus
ENSCSEG00000007829	shq1	68	31.579	WBGene00021655	Y48A5A.1	90	31.683	Caenorhabditis_elegans
ENSCSEG00000007829	shq1	90	52.324	ENSCJAG00000015131	SHQ1	72	61.244	Callithrix_jacchus
ENSCSEG00000007829	shq1	92	52.007	ENSCAFG00000006434	SHQ1	72	62.919	Canis_familiaris
ENSCSEG00000007829	shq1	92	52.174	ENSCAFG00020016743	SHQ1	72	63.158	Canis_lupus_dingo
ENSCSEG00000007829	shq1	91	53.469	ENSCHIG00000012271	SHQ1	66	62.530	Capra_hircus
ENSCSEG00000007829	shq1	66	58.696	ENSTSYG00000014439	SHQ1	72	58.612	Carlito_syrichta
ENSCSEG00000007829	shq1	84	48.302	ENSCAPG00000009343	SHQ1	57	67.742	Cavia_aperea
ENSCSEG00000007829	shq1	90	52.613	ENSCPOG00000011443	SHQ1	71	60.671	Cavia_porcellus
ENSCSEG00000007829	shq1	75	46.895	ENSCCAG00000036087	-	70	47.059	Cebus_capucinus
ENSCSEG00000007829	shq1	66	52.530	ENSCCAG00000027080	SHQ1	70	52.392	Cebus_capucinus
ENSCSEG00000007829	shq1	91	54.291	ENSCATG00000041238	SHQ1	79	60.730	Cercocebus_atys
ENSCSEG00000007829	shq1	92	53.713	ENSCLAG00000004206	SHQ1	72	61.962	Chinchilla_lanigera
ENSCSEG00000007829	shq1	76	50.407	ENSCSAG00000011514	SHQ1	75	56.201	Chlorocebus_sabaeus
ENSCSEG00000007829	shq1	54	51.014	ENSCHOG00000003273	-	99	49.275	Choloepus_hoffmanni
ENSCSEG00000007829	shq1	69	61.927	ENSCPBG00000006441	SHQ1	68	61.814	Chrysemys_picta_bellii
ENSCSEG00000007829	shq1	72	42.094	ENSCING00000008013	-	98	42.152	Ciona_intestinalis
ENSCSEG00000007829	shq1	63	39.949	ENSCSAVG00000002332	-	94	39.614	Ciona_savignyi
ENSCSEG00000007829	shq1	91	54.466	ENSCANG00000039295	SHQ1	73	62.919	Colobus_angolensis_palliatus
ENSCSEG00000007829	shq1	72	60.573	ENSCGRG00001012583	Shq1	62	66.129	Cricetulus_griseus_chok1gshd
ENSCSEG00000007829	shq1	72	60.573	ENSCGRG00000009849	Shq1	62	66.129	Cricetulus_griseus_crigri
ENSCSEG00000007829	shq1	99	66.993	ENSCVAG00000020049	shq1	99	66.176	Cyprinodon_variegatus
ENSCSEG00000007829	shq1	98	52.922	ENSDARG00000058522	shq1	69	67.640	Danio_rerio
ENSCSEG00000007829	shq1	91	53.082	ENSDNOG00000033937	SHQ1	72	62.679	Dasypus_novemcinctus
ENSCSEG00000007829	shq1	66	55.048	ENSETEG00000005766	SHQ1	73	54.893	Echinops_telfairi
ENSCSEG00000007829	shq1	61	47.105	ENSEBUG00000005445	shq1	73	49.691	Eptatretus_burgeri
ENSCSEG00000007829	shq1	94	50.164	ENSEASG00005002237	SHQ1	72	62.768	Equus_asinus_asinus
ENSCSEG00000007829	shq1	97	49.444	ENSECAG00000015673	SHQ1	71	63.246	Equus_caballus
ENSCSEG00000007829	shq1	93	54.437	ENSEEUG00000010568	SHQ1	72	62.679	Erinaceus_europaeus
ENSCSEG00000007829	shq1	97	59.770	ENSELUG00000003476	shq1	98	60.784	Esox_lucius
ENSCSEG00000007829	shq1	99	50.311	ENSFALG00000013428	SHQ1	68	63.636	Ficedula_albicollis
ENSCSEG00000007829	shq1	66	61.446	ENSFDAG00000005595	SHQ1	65	60.613	Fukomys_damarensis
ENSCSEG00000007829	shq1	98	66.393	ENSFHEG00000017552	shq1	99	64.309	Fundulus_heteroclitus
ENSCSEG00000007829	shq1	63	74.742	ENSGMOG00000007350	shq1	100	74.742	Gadus_morhua
ENSCSEG00000007829	shq1	69	62.673	ENSGALG00000007798	SHQ1	68	62.590	Gallus_gallus
ENSCSEG00000007829	shq1	63	78.608	ENSGACG00000011797	shq1	100	78.608	Gasterosteus_aculeatus
ENSCSEG00000007829	shq1	66	61.928	ENSGGOG00000034818	SHQ1	72	61.722	Gorilla_gorilla
ENSCSEG00000007829	shq1	98	69.622	ENSHBUG00000010857	shq1	98	69.622	Haplochromis_burtoni
ENSCSEG00000007829	shq1	66	61.205	ENSHGLG00000003637	SHQ1	65	61.005	Heterocephalus_glaber_female
ENSCSEG00000007829	shq1	66	61.205	ENSHGLG00100011957	SHQ1	66	60.664	Heterocephalus_glaber_male
ENSCSEG00000007829	shq1	99	61.874	ENSHCOG00000010799	shq1	70	73.839	Hippocampus_comes
ENSCSEG00000007829	shq1	92	51.979	ENSSTOG00000010043	SHQ1	76	61.005	Ictidomys_tridecemlineatus
ENSCSEG00000007829	shq1	66	62.500	ENSJJAG00000017611	Shq1	73	62.291	Jaculus_jaculus
ENSCSEG00000007829	shq1	99	67.476	ENSKMAG00000004457	shq1	99	67.476	Kryptolebias_marmoratus
ENSCSEG00000007829	shq1	69	64.828	ENSLACG00000014243	SHQ1	67	62.556	Latimeria_chalumnae
ENSCSEG00000007829	shq1	99	55.263	ENSLOCG00000009970	shq1	73	67.303	Lepisosteus_oculatus
ENSCSEG00000007829	shq1	90	39.399	ENSMFAG00000037396	-	77	42.391	Macaca_fascicularis
ENSCSEG00000007829	shq1	91	54.110	ENSMFAG00000039148	SHQ1	79	60.043	Macaca_fascicularis
ENSCSEG00000007829	shq1	83	51.866	ENSMMUG00000009571	SHQ1	74	57.857	Macaca_mulatta
ENSCSEG00000007829	shq1	90	39.572	ENSMMUG00000021761	-	69	42.718	Macaca_mulatta
ENSCSEG00000007829	shq1	91	54.110	ENSMNEG00000032667	SHQ1	79	60.043	Macaca_nemestrina
ENSCSEG00000007829	shq1	66	62.892	ENSMLEG00000038493	SHQ1	72	62.679	Mandrillus_leucophaeus
ENSCSEG00000007829	shq1	99	73.548	ENSMAMG00000023432	shq1	98	70.126	Mastacembelus_armatus
ENSCSEG00000007829	shq1	98	69.787	ENSMZEG00005008649	shq1	98	69.787	Maylandia_zebra
ENSCSEG00000007829	shq1	95	50.639	ENSMGAG00000009640	SHQ1	69	61.483	Meleagris_gallopavo
ENSCSEG00000007829	shq1	71	60.579	ENSMAUG00000022030	Shq1	62	67.742	Mesocricetus_auratus
ENSCSEG00000007829	shq1	91	52.108	ENSMICG00000009224	SHQ1	71	61.244	Microcebus_murinus
ENSCSEG00000007829	shq1	70	61.486	ENSMOCG00000017836	Shq1	74	61.722	Microtus_ochrogaster
ENSCSEG00000007829	shq1	98	66.447	ENSMMOG00000010569	shq1	70	78.537	Mola_mola
ENSCSEG00000007829	shq1	77	56.818	ENSMODG00000003926	SHQ1	75	59.905	Monodelphis_domestica
ENSCSEG00000007829	shq1	99	69.494	ENSMALG00000008870	shq1	99	67.863	Monopterus_albus
ENSCSEG00000007829	shq1	71	60.976	MGP_CAROLIEiJ_G0028689	Shq1	73	61.722	Mus_caroli
ENSCSEG00000007829	shq1	71	61.062	ENSMUSG00000035378	Shq1	73	61.962	Mus_musculus
ENSCSEG00000007829	shq1	72	61.454	MGP_PahariEiJ_G0022440	Shq1	73	62.291	Mus_pahari
ENSCSEG00000007829	shq1	76	58.969	MGP_SPRETEiJ_G0029717	Shq1	73	61.814	Mus_spretus
ENSCSEG00000007829	shq1	91	53.265	ENSMPUG00000017006	SHQ1	71	61.962	Mustela_putorius_furo
ENSCSEG00000007829	shq1	85	50.923	ENSMLUG00000013539	SHQ1	70	60.215	Myotis_lucifugus
ENSCSEG00000007829	shq1	75	53.533	ENSNGAG00000023317	Shq1	72	55.257	Nannospalax_galili
ENSCSEG00000007829	shq1	84	66.538	ENSNBRG00000024004	shq1	98	66.346	Neolamprologus_brichardi
ENSCSEG00000007829	shq1	94	52.614	ENSNLEG00000002731	SHQ1	72	62.440	Nomascus_leucogenys
ENSCSEG00000007829	shq1	65	59.259	ENSMEUG00000009350	-	67	59.259	Notamacropus_eugenii
ENSCSEG00000007829	shq1	78	57.841	ENSODEG00000009192	SHQ1	82	60.179	Octodon_degus
ENSCSEG00000007829	shq1	98	70.772	ENSONIG00000020264	shq1	99	70.772	Oreochromis_niloticus
ENSCSEG00000007829	shq1	93	54.118	ENSOCUG00000016695	SHQ1	71	62.440	Oryctolagus_cuniculus
ENSCSEG00000007829	shq1	88	66.300	ENSORLG00000023538	shq1	75	75.854	Oryzias_latipes
ENSCSEG00000007829	shq1	99	62.561	ENSORLG00020003697	shq1	74	76.341	Oryzias_latipes_hni
ENSCSEG00000007829	shq1	88	65.751	ENSORLG00015021040	shq1	75	75.854	Oryzias_latipes_hsok
ENSCSEG00000007829	shq1	92	65.559	ENSOMEG00000001225	shq1	96	64.510	Oryzias_melastigma
ENSCSEG00000007829	shq1	76	58.969	ENSOGAG00000003898	SHQ1	73	61.758	Otolemur_garnettii
ENSCSEG00000007829	shq1	91	53.061	ENSOARG00000009547	SHQ1	72	62.322	Ovis_aries
ENSCSEG00000007829	shq1	76	43.882	ENSPPAG00000043263	-	69	43.961	Pan_paniscus
ENSCSEG00000007829	shq1	66	62.892	ENSPPAG00000027714	SHQ1	72	62.679	Pan_paniscus
ENSCSEG00000007829	shq1	91	52.277	ENSPPRG00000004769	SHQ1	72	62.440	Panthera_pardus
ENSCSEG00000007829	shq1	91	50.433	ENSPTIG00000011478	SHQ1	71	59.080	Panthera_tigris_altaica
ENSCSEG00000007829	shq1	76	43.789	ENSPTRG00000048303	-	69	43.855	Pan_troglodytes
ENSCSEG00000007829	shq1	66	62.892	ENSPTRG00000015106	SHQ1	72	62.679	Pan_troglodytes
ENSCSEG00000007829	shq1	66	62.892	ENSPANG00000002881	SHQ1	72	63.397	Papio_anubis
ENSCSEG00000007829	shq1	69	61.927	ENSPSIG00000005536	SHQ1	68	61.814	Pelodiscus_sinensis
ENSCSEG00000007829	shq1	99	57.749	ENSPMGG00000008838	shq1	70	71.394	Periophthalmus_magnuspinnatus
ENSCSEG00000007829	shq1	72	60.573	ENSPEMG00000000251	Shq1	79	60.573	Peromyscus_maniculatus_bairdii
ENSCSEG00000007829	shq1	69	57.931	ENSPMAG00000005372	shq1	94	59.145	Petromyzon_marinus
ENSCSEG00000007829	shq1	91	64.613	ENSPFOG00000003118	shq1	98	64.298	Poecilia_formosa
ENSCSEG00000007829	shq1	77	61.426	ENSPMEG00000011076	shq1	98	60.669	Poecilia_mexicana
ENSCSEG00000007829	shq1	84	62.813	ENSPREG00000000591	shq1	92	62.646	Poecilia_reticulata
ENSCSEG00000007829	shq1	92	53.012	ENSPPYG00000013717	SHQ1	72	62.201	Pongo_abelii
ENSCSEG00000007829	shq1	66	62.530	ENSPCAG00000009035	SHQ1	73	62.530	Procavia_capensis
ENSCSEG00000007829	shq1	66	61.337	ENSPCOG00000008415	SHQ1	72	62.381	Propithecus_coquereli
ENSCSEG00000007829	shq1	91	52.901	ENSPVAG00000017392	SHQ1	72	62.530	Pteropus_vampyrus
ENSCSEG00000007829	shq1	98	70.115	ENSPNYG00000003878	shq1	98	70.115	Pundamilia_nyererei
ENSCSEG00000007829	shq1	69	70.892	ENSPNAG00000026840	shq1	68	71.046	Pygocentrus_nattereri
ENSCSEG00000007829	shq1	71	60.398	ENSRNOG00000005433	Shq1	69	61.575	Rattus_norvegicus
ENSCSEG00000007829	shq1	91	52.837	ENSRBIG00000026280	SHQ1	72	60.827	Rhinopithecus_bieti
ENSCSEG00000007829	shq1	91	54.641	ENSRROG00000034126	SHQ1	73	63.158	Rhinopithecus_roxellana
ENSCSEG00000007829	shq1	66	54.699	ENSSBOG00000021038	SHQ1	70	55.024	Saimiri_boliviensis_boliviensis
ENSCSEG00000007829	shq1	68	61.663	ENSSHAG00000015077	SHQ1	74	61.337	Sarcophilus_harrisii
ENSCSEG00000007829	shq1	99	58.987	ENSSFOG00015016241	shq1	75	72.372	Scleropages_formosus
ENSCSEG00000007829	shq1	99	72.890	ENSSMAG00000016151	shq1	99	72.581	Scophthalmus_maximus
ENSCSEG00000007829	shq1	99	73.710	ENSSDUG00000011986	shq1	99	73.871	Seriola_dumerili
ENSCSEG00000007829	shq1	99	72.168	ENSSLDG00000013908	shq1	99	72.816	Seriola_lalandi_dorsalis
ENSCSEG00000007829	shq1	90	46.831	ENSSARG00000007119	SHQ1	60	59.649	Sorex_araneus
ENSCSEG00000007829	shq1	56	57.300	ENSSPUG00000011526	-	61	58.788	Sphenodon_punctatus
ENSCSEG00000007829	shq1	92	54.174	ENSSSCG00000011518	SHQ1	72	62.291	Sus_scrofa
ENSCSEG00000007829	shq1	66	62.679	ENSTGUG00000009933	SHQ1	72	62.679	Taeniopygia_guttata
ENSCSEG00000007829	shq1	98	62.007	ENSTRUG00000009446	shq1	99	62.193	Takifugu_rubripes
ENSCSEG00000007829	shq1	66	70.803	ENSTNIG00000007354	shq1	91	70.773	Tetraodon_nigroviridis
ENSCSEG00000007829	shq1	63	78.723	ENSTBEG00000011295	SHQ1	52	78.723	Tupaia_belangeri
ENSCSEG00000007829	shq1	92	53.061	ENSTTRG00000005320	SHQ1	72	61.244	Tursiops_truncatus
ENSCSEG00000007829	shq1	91	53.217	ENSUMAG00000024031	SHQ1	71	63.081	Ursus_maritimus
ENSCSEG00000007829	shq1	71	50.773	ENSVPAG00000004880	SHQ1	70	52.432	Vicugna_pacos
ENSCSEG00000007829	shq1	91	52.189	ENSVVUG00000013906	SHQ1	72	62.440	Vulpes_vulpes
ENSCSEG00000007829	shq1	69	62.093	ENSXETG00000032215	shq1	68	61.501	Xenopus_tropicalis