EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000007852 (Gene tree)
Gene ID: 103393897
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 12713 bases
Position: chr18:1765006-1777718
Accession: 103393897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012192	RRM_1	PF00076.22	6.1e-29	1	2
ENSCSEP00000012192	RRM_1	PF00076.22	6.1e-29	2	2
ENSCSEP00000012173	RRM_1	PF00076.22	6.4e-29	1	2
ENSCSEP00000012173	RRM_1	PF00076.22	6.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012336	-	3227	XM_008331016	ENSCSEP00000012192	633 (aa)	XP_008329238	-
ENSCSET00000012317	-	1839	-	ENSCSEP00000012173	612 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000007852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000007852	sfpq	54	62.349	ENSCSEG00000010708	nono	76	62.817
ENSCSEG00000007852	sfpq	54	62.349	ENSCSEG00000008189	NONO	79	62.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007852	sfpq	66	72.936	ENSG00000116560	SFPQ	97	70.968	Homo_sapiens
ENSCSEG00000007852	sfpq	73	80.000	ENSAPOG00000024257	sfpq	100	69.477	Acanthochromis_polyacanthus
ENSCSEG00000007852	sfpq	66	72.706	ENSAMEG00000000815	SFPQ	99	74.142	Ailuropoda_melanoleuca
ENSCSEG00000007852	sfpq	100	64.380	ENSACIG00000000905	sfpq	100	66.769	Amphilophus_citrinellus
ENSCSEG00000007852	sfpq	75	79.070	ENSAOCG00000002889	sfpq	100	67.664	Amphiprion_ocellaris
ENSCSEG00000007852	sfpq	75	79.070	ENSAPEG00000016556	sfpq	100	67.664	Amphiprion_percula
ENSCSEG00000007852	sfpq	100	66.423	ENSATEG00000002981	sfpq	100	68.882	Anabas_testudineus
ENSCSEG00000007852	sfpq	62	65.686	ENSANAG00000027438	-	60	65.441	Aotus_nancymaae
ENSCSEG00000007852	sfpq	53	53.295	ENSANAG00000037798	-	99	53.582	Aotus_nancymaae
ENSCSEG00000007852	sfpq	53	47.863	ENSANAG00000021268	-	100	50.704	Aotus_nancymaae
ENSCSEG00000007852	sfpq	100	70.029	ENSACLG00000022332	sfpq	100	68.406	Astatotilapia_calliptera
ENSCSEG00000007852	sfpq	71	74.160	ENSAMXG00000011538	sfpq	99	62.482	Astyanax_mexicanus
ENSCSEG00000007852	sfpq	66	73.165	ENSBTAG00000016328	SFPQ	99	55.804	Bos_taurus
ENSCSEG00000007852	sfpq	66	72.936	ENSCJAG00000001431	SFPQ	75	65.794	Callithrix_jacchus
ENSCSEG00000007852	sfpq	66	72.936	ENSCAFG00000003595	-	99	57.903	Canis_familiaris
ENSCSEG00000007852	sfpq	71	67.880	ENSCAFG00000018271	-	100	54.665	Canis_familiaris
ENSCSEG00000007852	sfpq	67	67.426	ENSCAFG00000017608	-	77	62.239	Canis_familiaris
ENSCSEG00000007852	sfpq	53	66.667	ENSCAFG00020010702	-	100	67.826	Canis_lupus_dingo
ENSCSEG00000007852	sfpq	71	67.880	ENSCAFG00020004881	-	100	55.102	Canis_lupus_dingo
ENSCSEG00000007852	sfpq	66	72.936	ENSCHIG00000023097	SFPQ	99	55.111	Capra_hircus
ENSCSEG00000007852	sfpq	52	60.519	ENSTSYG00000035106	-	98	61.494	Carlito_syrichta
ENSCSEG00000007852	sfpq	53	70.940	ENSTSYG00000037120	-	100	72.727	Carlito_syrichta
ENSCSEG00000007852	sfpq	53	63.143	ENSCPOG00000015018	-	100	63.912	Cavia_porcellus
ENSCSEG00000007852	sfpq	67	72.036	ENSCCAG00000029361	-	99	56.118	Cebus_capucinus
ENSCSEG00000007852	sfpq	58	77.183	ENSCATG00000036179	-	95	54.628	Cercocebus_atys
ENSCSEG00000007852	sfpq	67	48.322	ENSCATG00000032664	-	99	39.142	Cercocebus_atys
ENSCSEG00000007852	sfpq	53	70.940	ENSCLAG00000009583	-	100	72.727	Chinchilla_lanigera
ENSCSEG00000007852	sfpq	66	72.936	ENSCSAG00000001082	SFPQ	99	55.618	Chlorocebus_sabaeus
ENSCSEG00000007852	sfpq	57	71.053	ENSCHOG00000009131	SFPQ	100	72.703	Choloepus_hoffmanni
ENSCSEG00000007852	sfpq	67	72.931	ENSCPBG00000018674	SFPQ	99	59.549	Chrysemys_picta_bellii
ENSCSEG00000007852	sfpq	53	70.940	ENSCANG00000028087	-	100	72.727	Colobus_angolensis_palliatus
ENSCSEG00000007852	sfpq	67	71.622	ENSCGRG00001011698	Sfpq	99	55.571	Cricetulus_griseus_chok1gshd
ENSCSEG00000007852	sfpq	65	72.960	ENSCGRG00000010128	Sfpq	96	74.596	Cricetulus_griseus_crigri
ENSCSEG00000007852	sfpq	100	58.832	ENSCVAG00000019538	sfpq	100	69.801	Cyprinodon_variegatus
ENSCSEG00000007852	sfpq	65	79.236	ENSDARG00000011564	sfpq	100	86.957	Danio_rerio
ENSCSEG00000007852	sfpq	66	72.936	ENSDNOG00000049454	SFPQ	99	55.494	Dasypus_novemcinctus
ENSCSEG00000007852	sfpq	66	72.936	ENSDORG00000008109	Sfpq	99	55.540	Dipodomys_ordii
ENSCSEG00000007852	sfpq	65	67.053	ENSETEG00000001095	SFPQ	61	63.596	Echinops_telfairi
ENSCSEG00000007852	sfpq	66	72.936	ENSEASG00005012012	SFPQ	76	65.736	Equus_asinus_asinus
ENSCSEG00000007852	sfpq	66	72.936	ENSECAG00000000642	SFPQ	76	65.736	Equus_caballus
ENSCSEG00000007852	sfpq	66	79.953	ENSELUG00000023145	sfpq	99	63.497	Esox_lucius
ENSCSEG00000007852	sfpq	66	73.165	ENSFCAG00000042862	SFPQ	99	55.680	Felis_catus
ENSCSEG00000007852	sfpq	53	71.591	ENSFALG00000000731	SFPQ	100	72.443	Ficedula_albicollis
ENSCSEG00000007852	sfpq	53	62.500	ENSFDAG00000017723	-	100	65.254	Fukomys_damarensis
ENSCSEG00000007852	sfpq	100	58.658	ENSFHEG00000015200	sfpq	100	59.329	Fundulus_heteroclitus
ENSCSEG00000007852	sfpq	73	77.778	ENSGMOG00000011950	SFPQ	88	75.400	Gadus_morhua
ENSCSEG00000007852	sfpq	96	64.557	ENSGMOG00000011957	sfpq	99	64.885	Gadus_morhua
ENSCSEG00000007852	sfpq	66	73.333	ENSGALG00000002514	SFPQ	99	57.958	Gallus_gallus
ENSCSEG00000007852	sfpq	100	63.105	ENSGAFG00000014571	sfpq	100	62.642	Gambusia_affinis
ENSCSEG00000007852	sfpq	99	68.643	ENSGACG00000002034	sfpq	99	70.330	Gasterosteus_aculeatus
ENSCSEG00000007852	sfpq	65	73.086	ENSGGOG00000026354	SFPQ	100	72.727	Gorilla_gorilla
ENSCSEG00000007852	sfpq	100	70.029	ENSHBUG00000016818	sfpq	100	68.551	Haplochromis_burtoni
ENSCSEG00000007852	sfpq	67	71.558	ENSHGLG00000012001	SFPQ	99	56.118	Heterocephalus_glaber_female
ENSCSEG00000007852	sfpq	53	70.940	ENSHGLG00100004136	-	100	72.727	Heterocephalus_glaber_male
ENSCSEG00000007852	sfpq	100	61.404	ENSHCOG00000008612	sfpq	100	62.348	Hippocampus_comes
ENSCSEG00000007852	sfpq	74	72.727	ENSIPUG00000013076	SFPQ	99	60.991	Ictalurus_punctatus
ENSCSEG00000007852	sfpq	53	70.940	ENSSTOG00000014004	-	100	72.727	Ictidomys_tridecemlineatus
ENSCSEG00000007852	sfpq	100	64.451	ENSKMAG00000000238	sfpq	95	73.029	Kryptolebias_marmoratus
ENSCSEG00000007852	sfpq	100	64.347	ENSLBEG00000003163	sfpq	98	67.575	Labrus_bergylta
ENSCSEG00000007852	sfpq	65	77.804	ENSLOCG00000001067	sfpq	97	61.881	Lepisosteus_oculatus
ENSCSEG00000007852	sfpq	66	73.165	ENSLAFG00000015951	SFPQ	83	65.977	Loxodonta_africana
ENSCSEG00000007852	sfpq	66	72.936	ENSMFAG00000000797	SFPQ	99	55.977	Macaca_fascicularis
ENSCSEG00000007852	sfpq	66	72.936	ENSMMUG00000019154	SFPQ	99	55.649	Macaca_mulatta
ENSCSEG00000007852	sfpq	66	72.936	ENSMNEG00000038895	SFPQ	99	55.977	Macaca_nemestrina
ENSCSEG00000007852	sfpq	53	68.376	ENSMLEG00000010643	-	100	70.170	Mandrillus_leucophaeus
ENSCSEG00000007852	sfpq	100	69.546	ENSMZEG00005026091	sfpq	100	68.622	Maylandia_zebra
ENSCSEG00000007852	sfpq	55	74.636	ENSMGAG00000004237	SFPQ	100	70.408	Meleagris_gallopavo
ENSCSEG00000007852	sfpq	67	71.622	ENSMAUG00000006402	Sfpq	99	54.172	Mesocricetus_auratus
ENSCSEG00000007852	sfpq	66	72.706	ENSMICG00000027265	SFPQ	75	65.730	Microcebus_murinus
ENSCSEG00000007852	sfpq	68	68.764	ENSMOCG00000019075	Sfpq	96	68.534	Microtus_ochrogaster
ENSCSEG00000007852	sfpq	100	69.016	ENSMMOG00000001074	sfpq	100	68.971	Mola_mola
ENSCSEG00000007852	sfpq	66	73.394	ENSMODG00000017937	SFPQ	99	56.515	Monodelphis_domestica
ENSCSEG00000007852	sfpq	100	68.111	ENSMALG00000010381	sfpq	100	69.040	Monopterus_albus
ENSCSEG00000007852	sfpq	66	73.165	MGP_CAROLIEiJ_G0026487	Sfpq	62	74.600	Mus_caroli
ENSCSEG00000007852	sfpq	66	73.165	ENSMUSG00000028820	Sfpq	62	74.600	Mus_musculus
ENSCSEG00000007852	sfpq	65	73.550	MGP_PahariEiJ_G0028818	Sfpq	62	74.600	Mus_pahari
ENSCSEG00000007852	sfpq	66	73.165	MGP_SPRETEiJ_G0027466	Sfpq	62	74.600	Mus_spretus
ENSCSEG00000007852	sfpq	67	71.396	ENSMLUG00000027090	SFPQ	99	72.809	Myotis_lucifugus
ENSCSEG00000007852	sfpq	65	73.318	ENSNGAG00000000888	Sfpq	62	74.600	Nannospalax_galili
ENSCSEG00000007852	sfpq	100	68.475	ENSNBRG00000017479	sfpq	100	68.328	Neolamprologus_brichardi
ENSCSEG00000007852	sfpq	53	70.940	ENSNLEG00000035521	-	100	72.727	Nomascus_leucogenys
ENSCSEG00000007852	sfpq	66	73.041	ENSMEUG00000014082	SFPQ	62	73.733	Notamacropus_eugenii
ENSCSEG00000007852	sfpq	69	70.022	ENSOPRG00000013696	SFPQ	65	71.397	Ochotona_princeps
ENSCSEG00000007852	sfpq	64	64.303	ENSODEG00000005485	SFPQ	96	58.382	Octodon_degus
ENSCSEG00000007852	sfpq	100	69.457	ENSONIG00000017737	sfpq	99	68.268	Oreochromis_niloticus
ENSCSEG00000007852	sfpq	53	71.143	ENSOANG00000008789	-	100	72.934	Ornithorhynchus_anatinus
ENSCSEG00000007852	sfpq	66	72.936	ENSOCUG00000001877	SFPQ	92	70.526	Oryctolagus_cuniculus
ENSCSEG00000007852	sfpq	100	62.691	ENSORLG00000007459	sfpq	100	62.691	Oryzias_latipes
ENSCSEG00000007852	sfpq	100	62.483	ENSORLG00020011818	sfpq	100	62.978	Oryzias_latipes_hni
ENSCSEG00000007852	sfpq	100	61.918	ENSORLG00015002131	sfpq	100	62.432	Oryzias_latipes_hsok
ENSCSEG00000007852	sfpq	100	62.022	ENSOMEG00000018020	sfpq	72	72.917	Oryzias_melastigma
ENSCSEG00000007852	sfpq	66	73.455	ENSOGAG00000027710	SFPQ	97	66.163	Otolemur_garnettii
ENSCSEG00000007852	sfpq	65	72.854	ENSOARG00000019439	SFPQ	66	74.537	Ovis_aries
ENSCSEG00000007852	sfpq	66	72.936	ENSPPAG00000030078	SFPQ	65	71.336	Pan_paniscus
ENSCSEG00000007852	sfpq	53	70.739	ENSPPRG00000015478	-	100	72.521	Panthera_pardus
ENSCSEG00000007852	sfpq	53	70.940	ENSPTIG00000007710	-	100	72.727	Panthera_tigris_altaica
ENSCSEG00000007852	sfpq	66	67.431	ENSPTRG00000000518	SFPQ	99	52.521	Pan_troglodytes
ENSCSEG00000007852	sfpq	80	70.600	ENSPKIG00000023035	sfpq	99	64.165	Paramormyrops_kingsleyae
ENSCSEG00000007852	sfpq	65	75.231	ENSPSIG00000011494	SFPQ	100	75.231	Pelodiscus_sinensis
ENSCSEG00000007852	sfpq	100	60.157	ENSPMGG00000023883	sfpq	100	60.964	Periophthalmus_magnuspinnatus
ENSCSEG00000007852	sfpq	67	71.396	ENSPEMG00000009794	Sfpq	96	69.937	Peromyscus_maniculatus_bairdii
ENSCSEG00000007852	sfpq	52	71.924	ENSPMAG00000005583	sfpq	92	59.540	Petromyzon_marinus
ENSCSEG00000007852	sfpq	100	65.835	ENSPFOG00000003127	sfpq	100	64.642	Poecilia_formosa
ENSCSEG00000007852	sfpq	100	62.025	ENSPREG00000008060	sfpq	100	62.307	Poecilia_reticulata
ENSCSEG00000007852	sfpq	66	72.936	ENSPPYG00000001560	SFPQ	99	55.977	Pongo_abelii
ENSCSEG00000007852	sfpq	65	72.494	ENSPCAG00000006164	SFPQ	60	73.953	Procavia_capensis
ENSCSEG00000007852	sfpq	66	72.936	ENSPCOG00000027127	SFPQ	99	55.915	Propithecus_coquereli
ENSCSEG00000007852	sfpq	66	71.659	ENSPVAG00000001865	SFPQ	99	54.584	Pteropus_vampyrus
ENSCSEG00000007852	sfpq	100	70.278	ENSPNYG00000007494	sfpq	100	69.253	Pundamilia_nyererei
ENSCSEG00000007852	sfpq	95	63.082	ENSPNAG00000002128	sfpq	99	61.927	Pygocentrus_nattereri
ENSCSEG00000007852	sfpq	66	73.394	ENSRNOG00000058461	Sfpq	99	56.108	Rattus_norvegicus
ENSCSEG00000007852	sfpq	67	66.213	ENSRBIG00000035286	SFPQ	100	72.727	Rhinopithecus_bieti
ENSCSEG00000007852	sfpq	66	72.706	ENSRROG00000040992	SFPQ	100	72.727	Rhinopithecus_roxellana
ENSCSEG00000007852	sfpq	51	52.339	ENSSBOG00000033925	-	99	50.872	Saimiri_boliviensis_boliviensis
ENSCSEG00000007852	sfpq	53	70.940	ENSSBOG00000024972	-	100	72.727	Saimiri_boliviensis_boliviensis
ENSCSEG00000007852	sfpq	65	72.906	ENSSHAG00000016107	-	98	68.640	Sarcophilus_harrisii
ENSCSEG00000007852	sfpq	53	70.487	ENSSHAG00000012312	-	100	69.341	Sarcophilus_harrisii
ENSCSEG00000007852	sfpq	79	71.899	ENSSFOG00015009289	sfpq	93	72.039	Scleropages_formosus
ENSCSEG00000007852	sfpq	100	66.425	ENSSMAG00000018201	sfpq	100	67.299	Scophthalmus_maximus
ENSCSEG00000007852	sfpq	100	70.839	ENSSDUG00000008402	sfpq	100	71.534	Seriola_dumerili
ENSCSEG00000007852	sfpq	100	70.338	ENSSLDG00000018917	sfpq	100	70.882	Seriola_lalandi_dorsalis
ENSCSEG00000007852	sfpq	55	72.011	ENSSARG00000006409	SFPQ	100	73.713	Sorex_araneus
ENSCSEG00000007852	sfpq	100	68.275	ENSSPAG00000016550	sfpq	100	70.322	Stegastes_partitus
ENSCSEG00000007852	sfpq	66	72.936	ENSSSCG00000035690	SFPQ	99	55.556	Sus_scrofa
ENSCSEG00000007852	sfpq	65	73.380	ENSTGUG00000001722	SFPQ	100	74.074	Taeniopygia_guttata
ENSCSEG00000007852	sfpq	100	64.972	ENSTRUG00000003783	sfpq	100	69.163	Takifugu_rubripes
ENSCSEG00000007852	sfpq	91	73.356	ENSTNIG00000011331	sfpq	93	72.790	Tetraodon_nigroviridis
ENSCSEG00000007852	sfpq	64	79.310	ENSTBEG00000006238	SFPQ	58	65.489	Tupaia_belangeri
ENSCSEG00000007852	sfpq	65	71.694	ENSTTRG00000013930	SFPQ	99	54.455	Tursiops_truncatus
ENSCSEG00000007852	sfpq	53	68.661	ENSUMAG00000008056	-	100	70.455	Ursus_maritimus
ENSCSEG00000007852	sfpq	53	64.638	ENSVVUG00000000874	-	100	66.286	Vulpes_vulpes
ENSCSEG00000007852	sfpq	67	68.527	ENSXETG00000009682	sfpq	98	78.310	Xenopus_tropicalis
ENSCSEG00000007852	sfpq	98	61.584	ENSXMAG00000016391	sfpq	99	62.760	Xiphophorus_maculatus