EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007895 (Gene tree)
Gene ID: 103383935
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2761 bases
Position: chr9:12713029-12715789
Accession: 103383935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012245	EXOSC1	PF10447.9	6.4e-13	1	1
ENSCSEP00000012245	ECR1_N	PF14382.6	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012390	-	528	XM_008317276	ENSCSEP00000012245	175 (aa)	XP_008315498	-

Gene Model

Click here to download ENSCSEG00000007895's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007895	exosc1	95	77.108	ENSG00000171311	EXOSC1	98	77.108	Homo_sapiens
ENSCSEG00000007895	exosc1	97	82.990	ENSAPOG00000007822	exosc1	100	82.990	Acanthochromis_polyacanthus
ENSCSEG00000007895	exosc1	95	67.539	ENSAMEG00000000129	EXOSC1	98	67.539	Ailuropoda_melanoleuca
ENSCSEG00000007895	exosc1	91	81.081	ENSACIG00000018956	exosc1	91	81.081	Amphilophus_citrinellus
ENSCSEG00000007895	exosc1	97	83.505	ENSAOCG00000010699	exosc1	100	83.505	Amphiprion_ocellaris
ENSCSEG00000007895	exosc1	89	70.556	ENSAPEG00000012690	exosc1	97	70.556	Amphiprion_percula
ENSCSEG00000007895	exosc1	97	82.474	ENSATEG00000018683	exosc1	100	82.474	Anabas_testudineus
ENSCSEG00000007895	exosc1	97	63.918	ENSACAG00000002101	EXOSC1	99	63.918	Anolis_carolinensis
ENSCSEG00000007895	exosc1	95	77.711	ENSANAG00000034669	EXOSC1	98	77.711	Aotus_nancymaae
ENSCSEG00000007895	exosc1	97	82.474	ENSACLG00000021243	exosc1	100	82.474	Astatotilapia_calliptera
ENSCSEG00000007895	exosc1	97	79.897	ENSAMXG00000011116	exosc1	100	79.897	Astyanax_mexicanus
ENSCSEG00000007895	exosc1	95	67.539	ENSBTAG00000012699	EXOSC1	98	67.539	Bos_taurus
ENSCSEG00000007895	exosc1	95	77.108	ENSCJAG00000016586	EXOSC1	98	77.108	Callithrix_jacchus
ENSCSEG00000007895	exosc1	95	67.539	ENSCAFG00000009068	EXOSC1	92	67.539	Canis_familiaris
ENSCSEG00000007895	exosc1	95	67.539	ENSCAFG00020006002	EXOSC1	92	67.539	Canis_lupus_dingo
ENSCSEG00000007895	exosc1	95	67.539	ENSCHIG00000015253	EXOSC1	98	67.539	Capra_hircus
ENSCSEG00000007895	exosc1	95	77.108	ENSTSYG00000000760	EXOSC1	98	77.108	Carlito_syrichta
ENSCSEG00000007895	exosc1	95	67.539	ENSCPOG00000001173	EXOSC1	98	67.539	Cavia_porcellus
ENSCSEG00000007895	exosc1	95	45.181	ENSCCAG00000023986	EXOSC1	97	45.181	Cebus_capucinus
ENSCSEG00000007895	exosc1	95	77.108	ENSCATG00000034114	EXOSC1	98	77.108	Cercocebus_atys
ENSCSEG00000007895	exosc1	95	67.539	ENSCLAG00000002463	EXOSC1	98	67.539	Chinchilla_lanigera
ENSCSEG00000007895	exosc1	95	66.492	ENSCSAG00000005870	EXOSC1	98	66.492	Chlorocebus_sabaeus
ENSCSEG00000007895	exosc1	91	66.848	ENSCHOG00000006477	EXOSC1	98	66.848	Choloepus_hoffmanni
ENSCSEG00000007895	exosc1	95	45.596	ENSCING00000022734	-	92	45.596	Ciona_intestinalis
ENSCSEG00000007895	exosc1	95	48.187	ENSCSAVG00000010865	-	98	48.187	Ciona_savignyi
ENSCSEG00000007895	exosc1	95	77.108	ENSCANG00000034159	EXOSC1	98	77.108	Colobus_angolensis_palliatus
ENSCSEG00000007895	exosc1	95	67.016	ENSCGRG00001000335	Exosc1	98	67.016	Cricetulus_griseus_chok1gshd
ENSCSEG00000007895	exosc1	95	67.016	ENSCGRG00000011602	Exosc1	98	67.016	Cricetulus_griseus_crigri
ENSCSEG00000007895	exosc1	97	75.258	ENSCVAG00000016748	exosc1	100	75.258	Cyprinodon_variegatus
ENSCSEG00000007895	exosc1	97	79.897	ENSDARG00000059841	exosc1	100	79.897	Danio_rerio
ENSCSEG00000007895	exosc1	68	61.379	ENSDNOG00000007983	EXOSC1	98	61.379	Dasypus_novemcinctus
ENSCSEG00000007895	exosc1	95	67.016	ENSDORG00000016528	Exosc1	98	67.016	Dipodomys_ordii
ENSCSEG00000007895	exosc1	91	43.684	FBgn0032346	Csl4	92	43.684	Drosophila_melanogaster
ENSCSEG00000007895	exosc1	95	67.539	ENSETEG00000002469	-	98	67.539	Echinops_telfairi
ENSCSEG00000007895	exosc1	94	58.333	ENSEBUG00000008164	exosc1	96	58.333	Eptatretus_burgeri
ENSCSEG00000007895	exosc1	95	70.652	ENSEASG00005008684	EXOSC1	98	70.652	Equus_asinus_asinus
ENSCSEG00000007895	exosc1	52	55.963	ENSECAG00000010621	EXOSC1	69	55.963	Equus_caballus
ENSCSEG00000007895	exosc1	95	67.539	ENSEEUG00000005647	EXOSC1	98	67.539	Erinaceus_europaeus
ENSCSEG00000007895	exosc1	97	86.047	ENSELUG00000017369	exosc1	100	86.047	Esox_lucius
ENSCSEG00000007895	exosc1	95	77.711	ENSFCAG00000040563	EXOSC1	98	77.711	Felis_catus
ENSCSEG00000007895	exosc1	95	67.016	ENSFALG00000008450	EXOSC1	98	67.016	Ficedula_albicollis
ENSCSEG00000007895	exosc1	95	68.063	ENSFDAG00000000846	EXOSC1	98	68.063	Fukomys_damarensis
ENSCSEG00000007895	exosc1	97	74.742	ENSFHEG00000009154	exosc1	100	74.742	Fundulus_heteroclitus
ENSCSEG00000007895	exosc1	97	82.474	ENSGMOG00000008993	exosc1	100	82.474	Gadus_morhua
ENSCSEG00000007895	exosc1	95	74.096	ENSGALG00000039917	EXOSC1	98	74.096	Gallus_gallus
ENSCSEG00000007895	exosc1	99	86.705	ENSGAFG00000010265	exosc1	97	86.705	Gambusia_affinis
ENSCSEG00000007895	exosc1	97	79.897	ENSGACG00000018936	exosc1	100	79.897	Gasterosteus_aculeatus
ENSCSEG00000007895	exosc1	95	65.445	ENSGAGG00000019192	EXOSC1	98	65.445	Gopherus_agassizii
ENSCSEG00000007895	exosc1	95	77.108	ENSGGOG00000003099	EXOSC1	98	77.108	Gorilla_gorilla
ENSCSEG00000007895	exosc1	97	82.474	ENSHBUG00000017857	exosc1	100	82.474	Haplochromis_burtoni
ENSCSEG00000007895	exosc1	95	67.539	ENSHGLG00000016927	EXOSC1	98	67.539	Heterocephalus_glaber_female
ENSCSEG00000007895	exosc1	95	67.539	ENSHGLG00100012208	EXOSC1	98	67.539	Heterocephalus_glaber_male
ENSCSEG00000007895	exosc1	97	81.959	ENSHCOG00000019882	exosc1	100	81.959	Hippocampus_comes
ENSCSEG00000007895	exosc1	97	77.835	ENSIPUG00000007685	exosc1	100	77.835	Ictalurus_punctatus
ENSCSEG00000007895	exosc1	50	53.846	ENSSTOG00000029860	-	86	53.846	Ictidomys_tridecemlineatus
ENSCSEG00000007895	exosc1	95	67.539	ENSSTOG00000006615	EXOSC1	98	67.539	Ictidomys_tridecemlineatus
ENSCSEG00000007895	exosc1	95	67.539	ENSJJAG00000013311	Exosc1	98	67.539	Jaculus_jaculus
ENSCSEG00000007895	exosc1	99	90.857	ENSKMAG00000001202	exosc1	84	90.857	Kryptolebias_marmoratus
ENSCSEG00000007895	exosc1	97	81.959	ENSLBEG00000011448	exosc1	100	81.959	Labrus_bergylta
ENSCSEG00000007895	exosc1	97	65.909	ENSLOCG00000003776	exosc1	100	65.909	Lepisosteus_oculatus
ENSCSEG00000007895	exosc1	95	68.063	ENSLAFG00000015983	EXOSC1	98	68.063	Loxodonta_africana
ENSCSEG00000007895	exosc1	95	77.108	ENSMFAG00000001493	EXOSC1	98	77.108	Macaca_fascicularis
ENSCSEG00000007895	exosc1	95	77.108	ENSMMUG00000020028	EXOSC1	98	77.108	Macaca_mulatta
ENSCSEG00000007895	exosc1	95	77.108	ENSMNEG00000029816	EXOSC1	98	77.108	Macaca_nemestrina
ENSCSEG00000007895	exosc1	95	61.257	ENSMLEG00000027643	EXOSC1	98	61.257	Mandrillus_leucophaeus
ENSCSEG00000007895	exosc1	97	82.474	ENSMAMG00000012200	exosc1	100	82.474	Mastacembelus_armatus
ENSCSEG00000007895	exosc1	97	82.474	ENSMZEG00005007042	exosc1	100	82.474	Maylandia_zebra
ENSCSEG00000007895	exosc1	95	77.108	ENSMAUG00000020462	-	98	77.108	Mesocricetus_auratus
ENSCSEG00000007895	exosc1	95	77.711	ENSMICG00000007664	EXOSC1	98	77.711	Microcebus_murinus
ENSCSEG00000007895	exosc1	93	62.434	ENSMOCG00000017124	-	96	62.434	Microtus_ochrogaster
ENSCSEG00000007895	exosc1	95	67.016	ENSMOCG00000006004	-	98	67.016	Microtus_ochrogaster
ENSCSEG00000007895	exosc1	97	70.588	ENSMMOG00000021403	exosc1	100	70.588	Mola_mola
ENSCSEG00000007895	exosc1	95	68.750	ENSMODG00000004213	EXOSC1	98	68.750	Monodelphis_domestica
ENSCSEG00000007895	exosc1	91	81.622	ENSMALG00000007061	exosc1	93	81.622	Monopterus_albus
ENSCSEG00000007895	exosc1	95	67.016	MGP_CAROLIEiJ_G0022959	Exosc1	98	67.016	Mus_caroli
ENSCSEG00000007895	exosc1	95	67.016	ENSMUSG00000034321	Exosc1	98	67.016	Mus_musculus
ENSCSEG00000007895	exosc1	95	67.016	MGP_PahariEiJ_G0014449	Exosc1	98	67.016	Mus_pahari
ENSCSEG00000007895	exosc1	95	67.016	MGP_SPRETEiJ_G0023880	Exosc1	98	67.016	Mus_spretus
ENSCSEG00000007895	exosc1	95	67.539	ENSMPUG00000017044	EXOSC1	98	67.539	Mustela_putorius_furo
ENSCSEG00000007895	exosc1	95	67.539	ENSMLUG00000009228	EXOSC1	98	67.539	Myotis_lucifugus
ENSCSEG00000007895	exosc1	95	65.969	ENSNGAG00000022033	Exosc1	98	65.969	Nannospalax_galili
ENSCSEG00000007895	exosc1	97	74.854	ENSNBRG00000024007	exosc1	100	74.854	Neolamprologus_brichardi
ENSCSEG00000007895	exosc1	95	76.506	ENSNLEG00000013872	EXOSC1	98	76.506	Nomascus_leucogenys
ENSCSEG00000007895	exosc1	50	53.571	ENSMEUG00000002246	EXOSC1	97	53.571	Notamacropus_eugenii
ENSCSEG00000007895	exosc1	95	67.016	ENSOPRG00000005065	EXOSC1	98	67.016	Ochotona_princeps
ENSCSEG00000007895	exosc1	95	68.063	ENSODEG00000016709	EXOSC1	98	68.063	Octodon_degus
ENSCSEG00000007895	exosc1	97	82.564	ENSONIG00000017683	exosc1	100	82.564	Oreochromis_niloticus
ENSCSEG00000007895	exosc1	65	89.474	ENSOANG00000006563	EXOSC1	96	87.603	Ornithorhynchus_anatinus
ENSCSEG00000007895	exosc1	95	62.827	ENSOCUG00000026461	-	98	62.827	Oryctolagus_cuniculus
ENSCSEG00000007895	exosc1	95	67.188	ENSOCUG00000011898	-	98	67.188	Oryctolagus_cuniculus
ENSCSEG00000007895	exosc1	97	76.923	ENSORLG00000011595	exosc1	100	76.923	Oryzias_latipes
ENSCSEG00000007895	exosc1	97	76.923	ENSORLG00020005831	exosc1	100	76.923	Oryzias_latipes_hni
ENSCSEG00000007895	exosc1	97	76.410	ENSORLG00015004317	exosc1	100	76.410	Oryzias_latipes_hsok
ENSCSEG00000007895	exosc1	97	68.649	ENSOMEG00000013907	exosc1	100	68.649	Oryzias_melastigma
ENSCSEG00000007895	exosc1	95	67.016	ENSOGAG00000016259	EXOSC1	98	67.016	Otolemur_garnettii
ENSCSEG00000007895	exosc1	95	67.016	ENSOARG00000010136	EXOSC1	98	67.016	Ovis_aries
ENSCSEG00000007895	exosc1	95	61.140	ENSPPAG00000039842	EXOSC1	98	61.140	Pan_paniscus
ENSCSEG00000007895	exosc1	95	77.711	ENSPPRG00000023366	EXOSC1	98	77.711	Panthera_pardus
ENSCSEG00000007895	exosc1	95	77.711	ENSPTIG00000017701	EXOSC1	98	77.711	Panthera_tigris_altaica
ENSCSEG00000007895	exosc1	95	77.108	ENSPTRG00000002808	EXOSC1	98	77.108	Pan_troglodytes
ENSCSEG00000007895	exosc1	95	77.108	ENSPANG00000021324	EXOSC1	98	77.108	Papio_anubis
ENSCSEG00000007895	exosc1	97	79.381	ENSPKIG00000016037	exosc1	100	79.381	Paramormyrops_kingsleyae
ENSCSEG00000007895	exosc1	69	77.686	ENSPSIG00000013571	EXOSC1	98	77.686	Pelodiscus_sinensis
ENSCSEG00000007895	exosc1	97	94.675	ENSPMGG00000014002	exosc1	100	94.675	Periophthalmus_magnuspinnatus
ENSCSEG00000007895	exosc1	95	67.016	ENSPEMG00000010710	-	98	67.016	Peromyscus_maniculatus_bairdii
ENSCSEG00000007895	exosc1	91	59.677	ENSPMAG00000000195	exosc1	95	59.677	Petromyzon_marinus
ENSCSEG00000007895	exosc1	95	68.586	ENSPCIG00000002210	EXOSC1	97	68.586	Phascolarctos_cinereus
ENSCSEG00000007895	exosc1	99	74.747	ENSPFOG00000006755	exosc1	97	74.747	Poecilia_formosa
ENSCSEG00000007895	exosc1	90	87.342	ENSPLAG00000005880	exosc1	98	87.342	Poecilia_latipinna
ENSCSEG00000007895	exosc1	99	85.549	ENSPMEG00000015598	exosc1	97	85.549	Poecilia_mexicana
ENSCSEG00000007895	exosc1	99	85.549	ENSPREG00000000405	exosc1	97	85.549	Poecilia_reticulata
ENSCSEG00000007895	exosc1	95	67.016	ENSPPYG00000002531	EXOSC1	98	67.016	Pongo_abelii
ENSCSEG00000007895	exosc1	95	67.016	ENSPCAG00000009135	EXOSC1	98	67.016	Procavia_capensis
ENSCSEG00000007895	exosc1	95	70.482	ENSPCOG00000027539	EXOSC1	97	70.482	Propithecus_coquereli
ENSCSEG00000007895	exosc1	95	67.539	ENSPVAG00000003372	EXOSC1	98	67.539	Pteropus_vampyrus
ENSCSEG00000007895	exosc1	97	94.706	ENSPNYG00000021745	exosc1	100	94.706	Pundamilia_nyererei
ENSCSEG00000007895	exosc1	91	91.195	ENSPNAG00000001944	exosc1	95	91.195	Pygocentrus_nattereri
ENSCSEG00000007895	exosc1	95	67.016	ENSRNOG00000048708	Exosc1	98	67.016	Rattus_norvegicus
ENSCSEG00000007895	exosc1	95	77.108	ENSRBIG00000035618	EXOSC1	98	77.108	Rhinopithecus_bieti
ENSCSEG00000007895	exosc1	95	77.108	ENSRROG00000032589	EXOSC1	98	77.108	Rhinopithecus_roxellana
ENSCSEG00000007895	exosc1	95	77.711	ENSSBOG00000000359	EXOSC1	98	77.711	Saimiri_boliviensis_boliviensis
ENSCSEG00000007895	exosc1	69	88.525	ENSSHAG00000018219	EXOSC1	83	88.525	Sarcophilus_harrisii
ENSCSEG00000007895	exosc1	95	85.714	ENSSFOG00015016289	-	98	85.714	Scleropages_formosus
ENSCSEG00000007895	exosc1	97	78.351	ENSSFOG00015009069	exosc1	100	78.351	Scleropages_formosus
ENSCSEG00000007895	exosc1	97	83.505	ENSSMAG00000003721	exosc1	100	83.505	Scophthalmus_maximus
ENSCSEG00000007895	exosc1	97	82.990	ENSSDUG00000002993	exosc1	100	82.990	Seriola_dumerili
ENSCSEG00000007895	exosc1	97	82.990	ENSSLDG00000025181	exosc1	100	82.990	Seriola_lalandi_dorsalis
ENSCSEG00000007895	exosc1	95	67.539	ENSSARG00000000162	EXOSC1	98	67.539	Sorex_araneus
ENSCSEG00000007895	exosc1	95	63.874	ENSSPUG00000012263	EXOSC1	98	63.874	Sphenodon_punctatus
ENSCSEG00000007895	exosc1	99	73.737	ENSSPAG00000016792	exosc1	85	73.737	Stegastes_partitus
ENSCSEG00000007895	exosc1	95	67.016	ENSSSCG00000010518	EXOSC1	89	67.016	Sus_scrofa
ENSCSEG00000007895	exosc1	95	67.016	ENSTGUG00000009692	EXOSC1	98	67.016	Taeniopygia_guttata
ENSCSEG00000007895	exosc1	94	69.474	ENSTRUG00000007706	exosc1	98	69.474	Takifugu_rubripes
ENSCSEG00000007895	exosc1	98	69.347	ENSTNIG00000014079	exosc1	100	69.347	Tetraodon_nigroviridis
ENSCSEG00000007895	exosc1	95	66.842	ENSTBEG00000006011	EXOSC1	98	66.842	Tupaia_belangeri
ENSCSEG00000007895	exosc1	90	68.852	ENSTTRG00000009887	EXOSC1	99	68.852	Tursiops_truncatus
ENSCSEG00000007895	exosc1	95	59.639	ENSUAMG00000010266	EXOSC1	97	59.639	Ursus_americanus
ENSCSEG00000007895	exosc1	95	59.639	ENSUMAG00000022002	EXOSC1	97	59.639	Ursus_maritimus
ENSCSEG00000007895	exosc1	95	67.539	ENSVVUG00000023192	EXOSC1	62	67.539	Vulpes_vulpes
ENSCSEG00000007895	exosc1	96	66.321	ENSXETG00000003434	exosc1	99	66.321	Xenopus_tropicalis
ENSCSEG00000007895	exosc1	69	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSCSEG00000007895	exosc1	99	85.549	ENSXMAG00000023382	exosc1	97	85.549	Xiphophorus_maculatus