EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007948 (Gene tree)
Gene ID: 103381496
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2646 bases
Position: chr8:1992089-1994734
Accession: 103381496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012334	PseudoU_synth_1	PF01416.20	1.3e-29	1	1
ENSCSEP00000012319	PseudoU_synth_1	PF01416.20	1.5e-29	1	1
ENSCSEP00000012310	PseudoU_synth_1	PF01416.20	1.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012465	-	1972	XM_008313874	ENSCSEP00000012319	479 (aa)	XP_008312096	UPI0004960957
ENSCSET00000012481	-	1368	-	ENSCSEP00000012334	455 (aa)	-	-
ENSCSET00000012456	-	2170	-	ENSCSEP00000012310	485 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000007948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007948	pus3	89	52.681	ENSG00000110060	PUS3	92	54.658	Homo_sapiens
ENSCSEG00000007948	pus3	100	74.583	ENSAPOG00000019483	pus3	98	76.389	Acanthochromis_polyacanthus
ENSCSEG00000007948	pus3	89	52.558	ENSAMEG00000000144	PUS3	88	51.860	Ailuropoda_melanoleuca
ENSCSEG00000007948	pus3	79	83.929	ENSACIG00000024479	pus3	100	83.929	Amphilophus_citrinellus
ENSCSEG00000007948	pus3	100	73.695	ENSAOCG00000006589	pus3	100	73.695	Amphiprion_ocellaris
ENSCSEG00000007948	pus3	100	73.069	ENSAPEG00000014617	pus3	100	72.234	Amphiprion_percula
ENSCSEG00000007948	pus3	99	75.108	ENSATEG00000022731	pus3	100	73.904	Anabas_testudineus
ENSCSEG00000007948	pus3	89	53.241	ENSAPLG00000013285	PUS3	97	53.241	Anas_platyrhynchos
ENSCSEG00000007948	pus3	89	53.226	ENSACAG00000000186	PUS3	96	50.000	Anolis_carolinensis
ENSCSEG00000007948	pus3	89	52.326	ENSANAG00000035614	PUS3	88	52.326	Aotus_nancymaae
ENSCSEG00000007948	pus3	97	73.885	ENSACLG00000007356	pus3	100	72.824	Astatotilapia_calliptera
ENSCSEG00000007948	pus3	95	65.577	ENSAMXG00000019534	pus3	96	64.301	Astyanax_mexicanus
ENSCSEG00000007948	pus3	89	51.494	ENSBTAG00000014339	PUS3	88	50.461	Bos_taurus
ENSCSEG00000007948	pus3	79	36.290	WBGene00006473	tag-124	95	35.659	Caenorhabditis_elegans
ENSCSEG00000007948	pus3	89	52.546	ENSCJAG00000046645	PUS3	88	52.546	Callithrix_jacchus
ENSCSEG00000007948	pus3	89	51.620	ENSCAFG00000010534	PUS3	88	51.620	Canis_familiaris
ENSCSEG00000007948	pus3	89	51.620	ENSCAFG00020010659	PUS3	88	51.620	Canis_lupus_dingo
ENSCSEG00000007948	pus3	89	51.620	ENSCHIG00000012260	PUS3	88	51.620	Capra_hircus
ENSCSEG00000007948	pus3	89	53.009	ENSTSYG00000014744	PUS3	88	53.009	Carlito_syrichta
ENSCSEG00000007948	pus3	90	52.083	ENSCAPG00000012231	PUS3	89	52.083	Cavia_aperea
ENSCSEG00000007948	pus3	90	52.083	ENSCPOG00000032587	PUS3	89	52.083	Cavia_porcellus
ENSCSEG00000007948	pus3	89	52.791	ENSCCAG00000035999	PUS3	88	52.791	Cebus_capucinus
ENSCSEG00000007948	pus3	89	51.981	ENSCATG00000043123	PUS3	88	51.748	Cercocebus_atys
ENSCSEG00000007948	pus3	89	52.436	ENSCLAG00000014947	PUS3	88	52.436	Chinchilla_lanigera
ENSCSEG00000007948	pus3	89	52.214	ENSCSAG00000002281	PUS3	88	51.981	Chlorocebus_sabaeus
ENSCSEG00000007948	pus3	79	53.846	ENSCHOG00000008442	PUS3	95	53.846	Choloepus_hoffmanni
ENSCSEG00000007948	pus3	51	47.843	ENSCPBG00000011173	PUS3	90	47.843	Chrysemys_picta_bellii
ENSCSEG00000007948	pus3	59	39.799	ENSCING00000009062	-	58	39.799	Ciona_intestinalis
ENSCSEG00000007948	pus3	86	35.697	ENSCSAVG00000002211	-	89	36.591	Ciona_savignyi
ENSCSEG00000007948	pus3	90	52.326	ENSCANG00000038729	PUS3	88	52.093	Colobus_angolensis_palliatus
ENSCSEG00000007948	pus3	58	30.903	ENSCGRG00001012429	Pusl1	91	30.903	Cricetulus_griseus_chok1gshd
ENSCSEG00000007948	pus3	89	52.900	ENSCGRG00001019842	Pus3	88	52.900	Cricetulus_griseus_chok1gshd
ENSCSEG00000007948	pus3	89	52.436	ENSCGRG00000010155	Pus3	88	52.436	Cricetulus_griseus_crigri
ENSCSEG00000007948	pus3	58	30.903	ENSCGRG00000006466	Pusl1	91	30.903	Cricetulus_griseus_crigri
ENSCSEG00000007948	pus3	100	70.146	ENSCVAG00000022150	pus3	100	69.520	Cyprinodon_variegatus
ENSCSEG00000007948	pus3	99	67.615	ENSDARG00000028976	pus3	98	66.740	Danio_rerio
ENSCSEG00000007948	pus3	89	51.628	ENSDNOG00000040719	PUS3	89	51.628	Dasypus_novemcinctus
ENSCSEG00000007948	pus3	89	52.448	ENSDORG00000001819	Pus3	88	52.448	Dipodomys_ordii
ENSCSEG00000007948	pus3	90	39.832	FBgn0034703	CG3045	92	39.623	Drosophila_melanogaster
ENSCSEG00000007948	pus3	89	47.926	ENSETEG00000013067	PUS3	88	47.332	Echinops_telfairi
ENSCSEG00000007948	pus3	89	54.656	ENSEBUG00000002154	pus3	62	59.420	Eptatretus_burgeri
ENSCSEG00000007948	pus3	89	52.436	ENSEASG00005023003	PUS3	88	52.436	Equus_asinus_asinus
ENSCSEG00000007948	pus3	89	52.436	ENSECAG00000007581	PUS3	88	52.436	Equus_caballus
ENSCSEG00000007948	pus3	89	51.740	ENSEEUG00000010543	PUS3	88	51.748	Erinaceus_europaeus
ENSCSEG00000007948	pus3	96	71.622	ENSELUG00000004425	pus3	98	71.171	Esox_lucius
ENSCSEG00000007948	pus3	90	51.606	ENSFCAG00000005340	PUS3	89	51.606	Felis_catus
ENSCSEG00000007948	pus3	89	54.378	ENSFALG00000005159	PUS3	89	53.580	Ficedula_albicollis
ENSCSEG00000007948	pus3	89	52.436	ENSFDAG00000020745	PUS3	88	52.436	Fukomys_damarensis
ENSCSEG00000007948	pus3	100	71.399	ENSFHEG00000010984	pus3	93	70.686	Fundulus_heteroclitus
ENSCSEG00000007948	pus3	94	67.277	ENSGMOG00000004534	pus3	99	67.202	Gadus_morhua
ENSCSEG00000007948	pus3	90	53.075	ENSGALG00000000962	PUS3	94	53.075	Gallus_gallus
ENSCSEG00000007948	pus3	100	71.399	ENSGAFG00000005615	pus3	100	72.025	Gambusia_affinis
ENSCSEG00000007948	pus3	99	72.429	ENSGACG00000002125	pus3	99	73.961	Gasterosteus_aculeatus
ENSCSEG00000007948	pus3	94	52.308	ENSGAGG00000000160	PUS3	92	52.308	Gopherus_agassizii
ENSCSEG00000007948	pus3	89	52.900	ENSGGOG00000015047	PUS3	88	52.668	Gorilla_gorilla
ENSCSEG00000007948	pus3	97	73.248	ENSHBUG00000016532	pus3	100	72.399	Haplochromis_burtoni
ENSCSEG00000007948	pus3	89	47.630	ENSHGLG00000006599	-	85	47.630	Heterocephalus_glaber_female
ENSCSEG00000007948	pus3	91	45.902	ENSHGLG00000018861	-	92	45.667	Heterocephalus_glaber_female
ENSCSEG00000007948	pus3	50	42.060	ENSHGLG00000016285	-	83	42.060	Heterocephalus_glaber_female
ENSCSEG00000007948	pus3	63	56.207	ENSHGLG00000015753	-	80	56.207	Heterocephalus_glaber_female
ENSCSEG00000007948	pus3	89	51.508	ENSHGLG00000000565	PUS3	88	51.508	Heterocephalus_glaber_female
ENSCSEG00000007948	pus3	62	52.465	ENSHGLG00100002435	-	85	56.557	Heterocephalus_glaber_male
ENSCSEG00000007948	pus3	90	48.387	ENSHGLG00100014825	-	88	48.380	Heterocephalus_glaber_male
ENSCSEG00000007948	pus3	73	46.927	ENSHGLG00100007519	-	75	48.657	Heterocephalus_glaber_male
ENSCSEG00000007948	pus3	91	43.765	ENSHGLG00100011339	-	85	47.814	Heterocephalus_glaber_male
ENSCSEG00000007948	pus3	67	54.870	ENSHGLG00100008656	-	95	54.870	Heterocephalus_glaber_male
ENSCSEG00000007948	pus3	95	71.854	ENSHCOG00000015705	pus3	97	71.854	Hippocampus_comes
ENSCSEG00000007948	pus3	95	66.222	ENSIPUG00000000105	pus3	94	65.843	Ictalurus_punctatus
ENSCSEG00000007948	pus3	89	52.436	ENSSTOG00000003721	PUS3	88	52.436	Ictidomys_tridecemlineatus
ENSCSEG00000007948	pus3	91	50.000	ENSJJAG00000011306	Pus3	89	52.315	Jaculus_jaculus
ENSCSEG00000007948	pus3	97	72.532	ENSKMAG00000016715	pus3	97	72.532	Kryptolebias_marmoratus
ENSCSEG00000007948	pus3	93	73.460	ENSLBEG00000004143	pus3	97	73.441	Labrus_bergylta
ENSCSEG00000007948	pus3	89	53.580	ENSLACG00000011161	PUS3	87	51.562	Latimeria_chalumnae
ENSCSEG00000007948	pus3	95	64.302	ENSLOCG00000011922	pus3	99	64.114	Lepisosteus_oculatus
ENSCSEG00000007948	pus3	89	52.778	ENSLAFG00000000535	PUS3	88	52.778	Loxodonta_africana
ENSCSEG00000007948	pus3	89	51.748	ENSMFAG00000041002	PUS3	88	51.748	Macaca_fascicularis
ENSCSEG00000007948	pus3	89	51.748	ENSMMUG00000041875	PUS3	88	51.748	Macaca_mulatta
ENSCSEG00000007948	pus3	89	51.748	ENSMNEG00000045347	PUS3	88	51.748	Macaca_nemestrina
ENSCSEG00000007948	pus3	89	51.981	ENSMLEG00000029053	PUS3	88	51.748	Mandrillus_leucophaeus
ENSCSEG00000007948	pus3	99	72.176	ENSMAMG00000016741	pus3	100	72.385	Mastacembelus_armatus
ENSCSEG00000007948	pus3	97	73.673	ENSMZEG00005015950	pus3	100	72.611	Maylandia_zebra
ENSCSEG00000007948	pus3	79	56.948	ENSMGAG00000000851	PUS3	93	55.890	Meleagris_gallopavo
ENSCSEG00000007948	pus3	58	30.690	ENSMAUG00000019924	Pusl1	91	30.690	Mesocricetus_auratus
ENSCSEG00000007948	pus3	89	52.668	ENSMAUG00000015873	Pus3	88	52.668	Mesocricetus_auratus
ENSCSEG00000007948	pus3	89	51.852	ENSMICG00000032941	PUS3	88	51.276	Microcebus_murinus
ENSCSEG00000007948	pus3	58	30.556	ENSMOCG00000005602	Pusl1	91	30.556	Microtus_ochrogaster
ENSCSEG00000007948	pus3	89	53.132	ENSMOCG00000004901	Pus3	88	53.132	Microtus_ochrogaster
ENSCSEG00000007948	pus3	99	73.068	ENSMMOG00000013909	pus3	99	72.627	Mola_mola
ENSCSEG00000007948	pus3	90	51.591	ENSMODG00000004222	PUS3	96	51.474	Monodelphis_domestica
ENSCSEG00000007948	pus3	99	74.017	ENSMALG00000022420	pus3	99	73.799	Monopterus_albus
ENSCSEG00000007948	pus3	89	52.194	MGP_CAROLIEiJ_G0031957	Pus3	96	57.742	Mus_caroli
ENSCSEG00000007948	pus3	89	52.425	ENSMUSG00000032103	Pus3	96	58.065	Mus_musculus
ENSCSEG00000007948	pus3	90	50.000	MGP_PahariEiJ_G0014822	Pus3	96	58.252	Mus_pahari
ENSCSEG00000007948	pus3	92	51.893	MGP_SPRETEiJ_G0033081	Pus3	96	58.387	Mus_spretus
ENSCSEG00000007948	pus3	89	53.241	ENSMPUG00000006568	PUS3	88	52.315	Mustela_putorius_furo
ENSCSEG00000007948	pus3	89	51.740	ENSMLUG00000030636	PUS3	88	51.740	Myotis_lucifugus
ENSCSEG00000007948	pus3	89	52.778	ENSNGAG00000013868	Pus3	88	52.914	Nannospalax_galili
ENSCSEG00000007948	pus3	97	74.145	ENSNBRG00000015864	pus3	100	73.291	Neolamprologus_brichardi
ENSCSEG00000007948	pus3	90	52.778	ENSNLEG00000007460	PUS3	88	52.546	Nomascus_leucogenys
ENSCSEG00000007948	pus3	76	59.459	ENSMEUG00000014040	PUS3	72	59.459	Notamacropus_eugenii
ENSCSEG00000007948	pus3	89	52.546	ENSOPRG00000007888	-	88	51.852	Ochotona_princeps
ENSCSEG00000007948	pus3	89	52.791	ENSODEG00000004280	PUS3	88	52.791	Octodon_degus
ENSCSEG00000007948	pus3	95	76.888	ENSONIG00000016224	pus3	98	76.888	Oreochromis_niloticus
ENSCSEG00000007948	pus3	93	51.685	ENSOANG00000000406	PUS3	91	51.236	Ornithorhynchus_anatinus
ENSCSEG00000007948	pus3	89	52.778	ENSOCUG00000004468	PUS3	83	51.740	Oryctolagus_cuniculus
ENSCSEG00000007948	pus3	100	70.981	ENSORLG00000008445	pus3	100	70.772	Oryzias_latipes
ENSCSEG00000007948	pus3	100	71.190	ENSORLG00020008847	pus3	99	70.981	Oryzias_latipes_hni
ENSCSEG00000007948	pus3	100	70.981	ENSORLG00015007438	pus3	100	70.772	Oryzias_latipes_hsok
ENSCSEG00000007948	pus3	99	71.861	ENSOMEG00000014321	pus3	99	69.937	Oryzias_melastigma
ENSCSEG00000007948	pus3	89	51.276	ENSOGAG00000008913	PUS3	88	51.157	Otolemur_garnettii
ENSCSEG00000007948	pus3	89	51.620	ENSOARG00000011870	PUS3	88	50.580	Ovis_aries
ENSCSEG00000007948	pus3	89	52.448	ENSPPAG00000025809	PUS3	88	52.214	Pan_paniscus
ENSCSEG00000007948	pus3	90	51.376	ENSPPRG00000005662	PUS3	89	51.376	Panthera_pardus
ENSCSEG00000007948	pus3	90	51.606	ENSPTIG00000001192	PUS3	89	51.606	Panthera_tigris_altaica
ENSCSEG00000007948	pus3	89	52.448	ENSPTRG00000004449	PUS3	88	52.214	Pan_troglodytes
ENSCSEG00000007948	pus3	89	51.981	ENSPANG00000013782	PUS3	88	51.748	Papio_anubis
ENSCSEG00000007948	pus3	94	65.695	ENSPKIG00000000646	pus3	96	65.639	Paramormyrops_kingsleyae
ENSCSEG00000007948	pus3	99	49.583	ENSPSIG00000013961	PUS3	97	49.583	Pelodiscus_sinensis
ENSCSEG00000007948	pus3	90	72.947	ENSPMGG00000000911	pus3	91	74.623	Periophthalmus_magnuspinnatus
ENSCSEG00000007948	pus3	89	51.389	ENSPEMG00000009602	Pus3	88	51.389	Peromyscus_maniculatus_bairdii
ENSCSEG00000007948	pus3	91	51.810	ENSPCIG00000010225	PUS3	96	51.810	Phascolarctos_cinereus
ENSCSEG00000007948	pus3	94	76.267	ENSPFOG00000009447	pus3	99	75.694	Poecilia_formosa
ENSCSEG00000007948	pus3	100	72.234	ENSPLAG00000023343	pus3	100	71.875	Poecilia_latipinna
ENSCSEG00000007948	pus3	100	72.860	ENSPMEG00000009870	pus3	100	72.860	Poecilia_mexicana
ENSCSEG00000007948	pus3	71	73.964	ENSPREG00000003179	pus3	64	73.964	Poecilia_reticulata
ENSCSEG00000007948	pus3	89	52.436	ENSPPYG00000004039	PUS3	88	52.204	Pongo_abelii
ENSCSEG00000007948	pus3	89	52.074	ENSPCAG00000000441	PUS3	88	52.315	Procavia_capensis
ENSCSEG00000007948	pus3	89	52.315	ENSPCOG00000019330	PUS3	88	51.740	Propithecus_coquereli
ENSCSEG00000007948	pus3	89	52.546	ENSPVAG00000002606	PUS3	88	51.972	Pteropus_vampyrus
ENSCSEG00000007948	pus3	97	73.885	ENSPNYG00000019615	pus3	100	73.036	Pundamilia_nyererei
ENSCSEG00000007948	pus3	94	68.722	ENSPNAG00000014541	pus3	93	68.062	Pygocentrus_nattereri
ENSCSEG00000007948	pus3	89	52.194	ENSRNOG00000012994	Pus3	89	52.194	Rattus_norvegicus
ENSCSEG00000007948	pus3	89	52.113	ENSRBIG00000044456	PUS3	91	49.569	Rhinopithecus_bieti
ENSCSEG00000007948	pus3	89	51.981	ENSRROG00000035245	PUS3	88	51.748	Rhinopithecus_roxellana
ENSCSEG00000007948	pus3	73	41.739	YFL001W	DEG1	73	41.739	Saccharomyces_cerevisiae
ENSCSEG00000007948	pus3	89	52.326	ENSSBOG00000022433	PUS3	88	52.326	Saimiri_boliviensis_boliviensis
ENSCSEG00000007948	pus3	95	50.000	ENSSHAG00000001382	PUS3	94	49.891	Sarcophilus_harrisii
ENSCSEG00000007948	pus3	93	70.047	ENSSFOG00015004850	pus3	95	69.340	Scleropages_formosus
ENSCSEG00000007948	pus3	97	76.383	ENSSMAG00000020340	pus3	99	76.383	Scophthalmus_maximus
ENSCSEG00000007948	pus3	100	77.244	ENSSDUG00000020825	pus3	100	76.618	Seriola_dumerili
ENSCSEG00000007948	pus3	100	78.288	ENSSLDG00000019932	pus3	100	77.453	Seriola_lalandi_dorsalis
ENSCSEG00000007948	pus3	67	56.352	ENSSARG00000013826	PUS3	96	55.375	Sorex_araneus
ENSCSEG00000007948	pus3	97	51.173	ENSSPUG00000001412	PUS3	95	50.749	Sphenodon_punctatus
ENSCSEG00000007948	pus3	97	77.149	ENSSPAG00000019221	pus3	99	76.471	Stegastes_partitus
ENSCSEG00000007948	pus3	89	50.812	ENSSSCG00000015222	PUS3	88	50.694	Sus_scrofa
ENSCSEG00000007948	pus3	89	53.118	ENSTGUG00000000778	-	97	52.546	Taeniopygia_guttata
ENSCSEG00000007948	pus3	95	70.199	ENSTRUG00000013050	pus3	99	70.199	Takifugu_rubripes
ENSCSEG00000007948	pus3	95	72.350	ENSTNIG00000004929	PUS3	95	72.350	Tetraodon_nigroviridis
ENSCSEG00000007948	pus3	84	69.533	ENSTNIG00000010307	pus3	97	69.042	Tetraodon_nigroviridis
ENSCSEG00000007948	pus3	89	51.852	ENSTBEG00000004382	PUS3	93	51.620	Tupaia_belangeri
ENSCSEG00000007948	pus3	89	50.926	ENSTTRG00000012167	PUS3	88	50.580	Tursiops_truncatus
ENSCSEG00000007948	pus3	89	52.326	ENSUAMG00000009297	PUS3	88	51.628	Ursus_americanus
ENSCSEG00000007948	pus3	89	52.558	ENSUMAG00000001795	PUS3	88	51.860	Ursus_maritimus
ENSCSEG00000007948	pus3	89	51.276	ENSVPAG00000001495	PUS3	88	51.276	Vicugna_pacos
ENSCSEG00000007948	pus3	89	51.852	ENSVVUG00000020152	PUS3	88	51.852	Vulpes_vulpes
ENSCSEG00000007948	pus3	89	50.588	ENSXETG00000024532	pus3	80	50.588	Xenopus_tropicalis
ENSCSEG00000007948	pus3	56	80.469	ENSXMAG00000028945	pus3	85	80.469	Xiphophorus_maculatus
ENSCSEG00000007948	pus3	56	80.469	ENSXMAG00000025146	pus3	79	80.469	Xiphophorus_maculatus
ENSCSEG00000007948	pus3	70	77.743	ENSXMAG00000025659	PUS3	53	78.730	Xiphophorus_maculatus
ENSCSEG00000007948	pus3	95	75.116	ENSXMAG00000028016	pus3	100	71.550	Xiphophorus_maculatus
ENSCSEG00000007948	pus3	72	76.524	ENSXMAG00000029934	pus3	76	76.524	Xiphophorus_maculatus
ENSCSEG00000007948	pus3	72	76.758	ENSXMAG00000025077	pus3	76	76.758	Xiphophorus_maculatus