EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000007991 (Gene tree)
Gene ID: 103393412
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8595 bases
Position: chr17:13027356-13035950
Accession: 103393412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000012412	IBN_N	PF03810.19	2.1e-09	1	1
ENSCSEP00000012421	IBN_N	PF03810.19	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000012569	-	6044	XM_008330378	ENSCSEP00000012421	835 (aa)	XP_008328600	-
ENSCSET00000012560	-	2559	XM_008330377	ENSCSEP00000012412	852 (aa)	XP_008328599	-

Gene Model

Click here to download ENSCSEG00000007991's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000007991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000007991	kpnb1	100	90.141	ENSG00000108424	KPNB1	100	93.333	Homo_sapiens
ENSCSEG00000007991	kpnb1	100	95.070	ENSAPOG00000020572	kpnb1	97	95.070	Acanthochromis_polyacanthus
ENSCSEG00000007991	kpnb1	99	90.778	ENSAMEG00000004613	KPNB1	99	90.778	Ailuropoda_melanoleuca
ENSCSEG00000007991	kpnb1	100	95.188	ENSACIG00000023130	kpnb1	99	95.188	Amphilophus_citrinellus
ENSCSEG00000007991	kpnb1	100	95.070	ENSAOCG00000007048	kpnb1	97	95.070	Amphiprion_ocellaris
ENSCSEG00000007991	kpnb1	100	95.070	ENSAPEG00000008270	kpnb1	97	95.070	Amphiprion_percula
ENSCSEG00000007991	kpnb1	100	94.718	ENSATEG00000015139	kpnb1	97	94.718	Anabas_testudineus
ENSCSEG00000007991	kpnb1	99	89.952	ENSAPLG00000010177	KPNB1	96	89.810	Anas_platyrhynchos
ENSCSEG00000007991	kpnb1	100	90.493	ENSACAG00000007097	KPNB1	97	90.493	Anolis_carolinensis
ENSCSEG00000007991	kpnb1	100	87.441	ENSANAG00000024932	-	97	87.441	Aotus_nancymaae
ENSCSEG00000007991	kpnb1	100	95.188	ENSACLG00000015070	kpnb1	97	95.188	Astatotilapia_calliptera
ENSCSEG00000007991	kpnb1	100	94.014	ENSAMXG00000041903	kpnb1	97	94.014	Astyanax_mexicanus
ENSCSEG00000007991	kpnb1	100	90.610	ENSBTAG00000006586	KPNB1	97	90.610	Bos_taurus
ENSCSEG00000007991	kpnb1	99	48.280	WBGene00002075	imb-1	95	47.958	Caenorhabditis_elegans
ENSCSEG00000007991	kpnb1	100	90.258	ENSCJAG00000007834	KPNB1	97	90.258	Callithrix_jacchus
ENSCSEG00000007991	kpnb1	100	90.610	ENSCAFG00000016678	KPNB1	97	90.610	Canis_familiaris
ENSCSEG00000007991	kpnb1	100	90.610	ENSCAFG00020023205	KPNB1	97	90.610	Canis_lupus_dingo
ENSCSEG00000007991	kpnb1	100	90.610	ENSCHIG00000014896	KPNB1	97	90.610	Capra_hircus
ENSCSEG00000007991	kpnb1	99	90.767	ENSTSYG00000014472	KPNB1	97	90.618	Carlito_syrichta
ENSCSEG00000007991	kpnb1	99	90.647	ENSCAPG00000014185	KPNB1	99	90.647	Cavia_aperea
ENSCSEG00000007991	kpnb1	100	90.258	ENSCPOG00000006566	KPNB1	97	90.258	Cavia_porcellus
ENSCSEG00000007991	kpnb1	100	83.724	ENSCCAG00000029263	-	97	83.724	Cebus_capucinus
ENSCSEG00000007991	kpnb1	99	69.530	ENSCCAG00000018551	-	97	69.427	Cebus_capucinus
ENSCSEG00000007991	kpnb1	100	90.141	ENSCATG00000037124	KPNB1	97	90.141	Cercocebus_atys
ENSCSEG00000007991	kpnb1	100	90.141	ENSCLAG00000017091	KPNB1	97	90.141	Chinchilla_lanigera
ENSCSEG00000007991	kpnb1	100	90.141	ENSCSAG00000002605	KPNB1	97	90.141	Chlorocebus_sabaeus
ENSCSEG00000007991	kpnb1	72	82.084	ENSCHOG00000010604	KPNB1	69	81.982	Choloepus_hoffmanni
ENSCSEG00000007991	kpnb1	100	90.610	ENSCPBG00000027423	KPNB1	93	90.610	Chrysemys_picta_bellii
ENSCSEG00000007991	kpnb1	99	65.269	ENSCING00000004639	-	96	65.064	Ciona_intestinalis
ENSCSEG00000007991	kpnb1	100	61.789	ENSCSAVG00000008624	-	97	61.789	Ciona_savignyi
ENSCSEG00000007991	kpnb1	99	91.617	ENSCANG00000013489	KPNB1	99	91.818	Colobus_angolensis_palliatus
ENSCSEG00000007991	kpnb1	100	90.376	ENSCGRG00001016042	Kpnb1	97	90.376	Cricetulus_griseus_chok1gshd
ENSCSEG00000007991	kpnb1	99	90.767	ENSCGRG00000013910	Kpnb1	99	90.767	Cricetulus_griseus_crigri
ENSCSEG00000007991	kpnb1	100	93.662	ENSDARG00000104889	kpnb1	97	93.662	Danio_rerio
ENSCSEG00000007991	kpnb1	99	62.110	FBgn0262743	Fs(2)Ket	96	61.972	Drosophila_melanogaster
ENSCSEG00000007991	kpnb1	99	80.672	ENSEBUG00000013869	kpnb1	97	80.259	Eptatretus_burgeri
ENSCSEG00000007991	kpnb1	100	90.610	ENSEASG00005000805	KPNB1	97	90.610	Equus_asinus_asinus
ENSCSEG00000007991	kpnb1	100	90.610	ENSECAG00000014560	KPNB1	97	90.610	Equus_caballus
ENSCSEG00000007991	kpnb1	88	91.579	ENSEEUG00000005046	KPNB1	88	90.909	Erinaceus_europaeus
ENSCSEG00000007991	kpnb1	100	94.836	ENSELUG00000015847	kpnb1	97	94.836	Esox_lucius
ENSCSEG00000007991	kpnb1	100	90.610	ENSFCAG00000023994	KPNB1	97	90.610	Felis_catus
ENSCSEG00000007991	kpnb1	99	90.887	ENSFDAG00000019923	KPNB1	99	90.887	Fukomys_damarensis
ENSCSEG00000007991	kpnb1	100	94.249	ENSFHEG00000020199	kpnb1	97	94.249	Fundulus_heteroclitus
ENSCSEG00000007991	kpnb1	100	89.437	ENSGMOG00000011607	kpnb1	97	89.437	Gadus_morhua
ENSCSEG00000007991	kpnb1	100	89.789	ENSGALG00000036962	KPNB1	97	89.789	Gallus_gallus
ENSCSEG00000007991	kpnb1	100	94.249	ENSGAFG00000000783	kpnb1	97	94.249	Gambusia_affinis
ENSCSEG00000007991	kpnb1	100	90.128	ENSGACG00000014765	kpnb1	97	90.128	Gasterosteus_aculeatus
ENSCSEG00000007991	kpnb1	100	90.898	ENSGAGG00000023737	KPNB1	92	90.488	Gopherus_agassizii
ENSCSEG00000007991	kpnb1	100	90.141	ENSGGOG00000008089	KPNB1	97	90.141	Gorilla_gorilla
ENSCSEG00000007991	kpnb1	100	95.188	ENSHBUG00000016826	kpnb1	97	95.188	Haplochromis_burtoni
ENSCSEG00000007991	kpnb1	100	90.493	ENSHGLG00000014138	KPNB1	97	90.493	Heterocephalus_glaber_female
ENSCSEG00000007991	kpnb1	99	90.887	ENSHGLG00100006572	KPNB1	99	90.887	Heterocephalus_glaber_male
ENSCSEG00000007991	kpnb1	100	92.019	ENSHCOG00000002084	kpnb1	97	92.019	Hippocampus_comes
ENSCSEG00000007991	kpnb1	100	89.319	ENSIPUG00000012402	kpnb1	94	89.319	Ictalurus_punctatus
ENSCSEG00000007991	kpnb1	100	90.493	ENSSTOG00000007896	KPNB1	97	90.493	Ictidomys_tridecemlineatus
ENSCSEG00000007991	kpnb1	100	90.141	ENSJJAG00000010909	Kpnb1	97	90.141	Jaculus_jaculus
ENSCSEG00000007991	kpnb1	100	93.779	ENSKMAG00000001547	kpnb1	97	93.779	Kryptolebias_marmoratus
ENSCSEG00000007991	kpnb1	99	94.667	ENSLBEG00000025794	kpnb1	99	92.824	Labrus_bergylta
ENSCSEG00000007991	kpnb1	89	91.105	ENSLACG00000017620	KPNB1	98	90.658	Latimeria_chalumnae
ENSCSEG00000007991	kpnb1	100	94.718	ENSLOCG00000013753	kpnb1	97	94.718	Lepisosteus_oculatus
ENSCSEG00000007991	kpnb1	100	85.480	ENSLAFG00000001328	KPNB1	97	85.480	Loxodonta_africana
ENSCSEG00000007991	kpnb1	99	90.528	ENSMFAG00000030197	KPNB1	99	90.528	Macaca_fascicularis
ENSCSEG00000007991	kpnb1	100	89.801	ENSMMUG00000019760	KPNB1	98	89.801	Macaca_mulatta
ENSCSEG00000007991	kpnb1	100	90.141	ENSMNEG00000040927	KPNB1	97	90.141	Macaca_nemestrina
ENSCSEG00000007991	kpnb1	99	90.528	ENSMLEG00000038185	KPNB1	96	90.380	Mandrillus_leucophaeus
ENSCSEG00000007991	kpnb1	100	94.953	ENSMAMG00000011036	kpnb1	97	94.953	Mastacembelus_armatus
ENSCSEG00000007991	kpnb1	100	95.188	ENSMZEG00005004564	kpnb1	97	95.188	Maylandia_zebra
ENSCSEG00000007991	kpnb1	57	91.561	ENSMGAG00000002770	-	99	91.286	Meleagris_gallopavo
ENSCSEG00000007991	kpnb1	100	90.376	ENSMAUG00000006211	Kpnb1	97	90.376	Mesocricetus_auratus
ENSCSEG00000007991	kpnb1	100	90.493	ENSMICG00000012059	KPNB1	82	90.493	Microcebus_murinus
ENSCSEG00000007991	kpnb1	100	90.376	ENSMOCG00000003683	Kpnb1	97	90.376	Microtus_ochrogaster
ENSCSEG00000007991	kpnb1	100	90.610	ENSMODG00000012505	KPNB1	97	90.610	Monodelphis_domestica
ENSCSEG00000007991	kpnb1	100	94.953	ENSMALG00000000863	kpnb1	97	94.953	Monopterus_albus
ENSCSEG00000007991	kpnb1	94	91.353	MGP_CAROLIEiJ_G0017050	Kpnb1	97	91.353	Mus_caroli
ENSCSEG00000007991	kpnb1	100	90.258	ENSMUSG00000001440	Kpnb1	97	90.258	Mus_musculus
ENSCSEG00000007991	kpnb1	100	89.566	ENSMPUG00000015220	KPNB1	97	89.566	Mustela_putorius_furo
ENSCSEG00000007991	kpnb1	100	85.597	ENSMLUG00000014522	KPNB1	97	85.597	Myotis_lucifugus
ENSCSEG00000007991	kpnb1	99	90.767	ENSNGAG00000017610	Kpnb1	99	90.767	Nannospalax_galili
ENSCSEG00000007991	kpnb1	100	95.188	ENSNBRG00000019305	kpnb1	97	95.188	Neolamprologus_brichardi
ENSCSEG00000007991	kpnb1	100	90.141	ENSNLEG00000001446	KPNB1	97	90.141	Nomascus_leucogenys
ENSCSEG00000007991	kpnb1	100	85.094	ENSMEUG00000014284	KPNB1	97	85.094	Notamacropus_eugenii
ENSCSEG00000007991	kpnb1	100	90.141	ENSODEG00000017287	KPNB1	97	90.141	Octodon_degus
ENSCSEG00000007991	kpnb1	100	95.305	ENSONIG00000009269	kpnb1	97	95.305	Oreochromis_niloticus
ENSCSEG00000007991	kpnb1	100	90.493	ENSOCUG00000015425	KPNB1	97	90.493	Oryctolagus_cuniculus
ENSCSEG00000007991	kpnb1	100	94.718	ENSORLG00000019936	kpnb1	97	94.718	Oryzias_latipes
ENSCSEG00000007991	kpnb1	100	94.718	ENSORLG00020021181	kpnb1	97	94.718	Oryzias_latipes_hni
ENSCSEG00000007991	kpnb1	100	94.601	ENSORLG00015012177	kpnb1	97	94.601	Oryzias_latipes_hsok
ENSCSEG00000007991	kpnb1	100	94.836	ENSOMEG00000021022	kpnb1	97	94.836	Oryzias_melastigma
ENSCSEG00000007991	kpnb1	100	90.493	ENSOGAG00000006153	KPNB1	97	90.493	Otolemur_garnettii
ENSCSEG00000007991	kpnb1	100	89.930	ENSOARG00000008469	KPNB1	99	89.930	Ovis_aries
ENSCSEG00000007991	kpnb1	100	90.141	ENSPPAG00000028842	KPNB1	97	90.141	Pan_paniscus
ENSCSEG00000007991	kpnb1	99	91.007	ENSPPRG00000022879	KPNB1	97	90.855	Panthera_pardus
ENSCSEG00000007991	kpnb1	99	91.007	ENSPTIG00000006870	KPNB1	97	90.855	Panthera_tigris_altaica
ENSCSEG00000007991	kpnb1	100	90.141	ENSPTRG00000009333	KPNB1	97	90.141	Pan_troglodytes
ENSCSEG00000007991	kpnb1	100	90.141	ENSPANG00000022099	KPNB1	97	90.141	Papio_anubis
ENSCSEG00000007991	kpnb1	100	93.310	ENSPKIG00000017563	kpnb1	97	93.310	Paramormyrops_kingsleyae
ENSCSEG00000007991	kpnb1	99	91.127	ENSPSIG00000009775	KPNB1	99	91.127	Pelodiscus_sinensis
ENSCSEG00000007991	kpnb1	100	88.628	ENSPMGG00000001041	kpnb1	90	88.628	Periophthalmus_magnuspinnatus
ENSCSEG00000007991	kpnb1	100	90.376	ENSPEMG00000017783	Kpnb1	97	90.376	Peromyscus_maniculatus_bairdii
ENSCSEG00000007991	kpnb1	99	84.450	ENSPMAG00000007117	kpnb1	97	84.192	Petromyzon_marinus
ENSCSEG00000007991	kpnb1	100	90.610	ENSPCIG00000001034	KPNB1	97	90.610	Phascolarctos_cinereus
ENSCSEG00000007991	kpnb1	100	94.249	ENSPFOG00000009014	kpnb1	97	94.249	Poecilia_formosa
ENSCSEG00000007991	kpnb1	100	94.249	ENSPLAG00000010922	kpnb1	97	94.249	Poecilia_latipinna
ENSCSEG00000007991	kpnb1	100	94.249	ENSPREG00000012268	kpnb1	97	94.249	Poecilia_reticulata
ENSCSEG00000007991	kpnb1	100	89.789	ENSPPYG00000025935	KPNB1	97	89.789	Pongo_abelii
ENSCSEG00000007991	kpnb1	78	78.007	ENSPCAG00000002526	KPNB1	78	77.926	Procavia_capensis
ENSCSEG00000007991	kpnb1	100	90.493	ENSPCOG00000026259	KPNB1	97	90.493	Propithecus_coquereli
ENSCSEG00000007991	kpnb1	100	90.141	ENSPVAG00000004910	KPNB1	97	90.141	Pteropus_vampyrus
ENSCSEG00000007991	kpnb1	100	90.807	ENSPNYG00000017703	kpnb1	93	95.921	Pundamilia_nyererei
ENSCSEG00000007991	kpnb1	100	86.030	ENSPNAG00000024047	kpnb1	97	86.030	Pygocentrus_nattereri
ENSCSEG00000007991	kpnb1	100	90.258	ENSRNOG00000009275	Kpnb1	97	90.258	Rattus_norvegicus
ENSCSEG00000007991	kpnb1	100	90.023	ENSRBIG00000002254	KPNB1	97	90.023	Rhinopithecus_bieti
ENSCSEG00000007991	kpnb1	100	90.141	ENSRROG00000030419	KPNB1	98	90.141	Rhinopithecus_roxellana
ENSCSEG00000007991	kpnb1	99	34.976	YLR347C	KAP95	96	34.629	Saccharomyces_cerevisiae
ENSCSEG00000007991	kpnb1	100	90.141	ENSSBOG00000030025	KPNB1	92	90.141	Saimiri_boliviensis_boliviensis
ENSCSEG00000007991	kpnb1	99	90.789	ENSSHAG00000018214	KPNB1	100	90.437	Sarcophilus_harrisii
ENSCSEG00000007991	kpnb1	100	94.249	ENSSFOG00015020000	kpnb1	99	92.958	Scleropages_formosus
ENSCSEG00000007991	kpnb1	100	95.188	ENSSDUG00000016218	kpnb1	97	95.188	Seriola_dumerili
ENSCSEG00000007991	kpnb1	100	95.188	ENSSLDG00000021549	kpnb1	96	95.188	Seriola_lalandi_dorsalis
ENSCSEG00000007991	kpnb1	100	89.906	ENSSPUG00000017799	KPNB1	97	89.906	Sphenodon_punctatus
ENSCSEG00000007991	kpnb1	100	95.070	ENSSPAG00000019346	kpnb1	97	95.070	Stegastes_partitus
ENSCSEG00000007991	kpnb1	100	90.610	ENSSSCG00000017514	KPNB1	97	90.610	Sus_scrofa
ENSCSEG00000007991	kpnb1	99	85.372	ENSTGUG00000003387	KPNB1	99	85.372	Taeniopygia_guttata
ENSCSEG00000007991	kpnb1	100	92.019	ENSTRUG00000000542	kpnb1	97	92.019	Takifugu_rubripes
ENSCSEG00000007991	kpnb1	100	92.840	ENSTNIG00000006494	kpnb1	97	92.840	Tetraodon_nigroviridis
ENSCSEG00000007991	kpnb1	99	91.127	ENSTTRG00000004682	KPNB1	99	91.127	Tursiops_truncatus
ENSCSEG00000007991	kpnb1	100	90.610	ENSUAMG00000025344	KPNB1	97	90.610	Ursus_americanus
ENSCSEG00000007991	kpnb1	99	91.007	ENSUMAG00000016471	KPNB1	96	90.855	Ursus_maritimus
ENSCSEG00000007991	kpnb1	100	76.995	ENSVPAG00000003675	KPNB1	97	76.995	Vicugna_pacos
ENSCSEG00000007991	kpnb1	100	90.610	ENSVVUG00000003085	KPNB1	97	90.610	Vulpes_vulpes
ENSCSEG00000007991	kpnb1	100	88.850	ENSXETG00000014717	kpnb1	97	88.850	Xenopus_tropicalis
ENSCSEG00000007991	kpnb1	100	94.131	ENSXMAG00000018792	kpnb1	97	94.131	Xiphophorus_maculatus