EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000008011 (Gene tree)
Gene ID
103393908
Gene Symbol
-
Alias
-
Full Name
elongation factor 1-alpha
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
2427 bases
Position
chr18:1841779-1844205
Accession
103393908
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000012417GTP_EFTUPF00009.273.2e-5311
ENSCSEP00000012417GTP_EFTU_D2PF03144.259.9e-1511
ENSCSEP00000012417GTP_EFTU_D3PF03143.173.4e-4011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000012565-1386XM_008331029ENSCSEP00000012417461 (aa)XP_008329251UPI000497FBF1
Gene Model
Click here to download ENSCSEG00000008011's gene model file
Pathways
Pathway IDPathway NameSource
csem03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000008011's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000008011-9667.494ENSCSEG00000019807si:dkey-37o8.19766.741
ENSCSEG00000008011-9087.198ENSCSEG00000007972-9887.624
ENSCSEG00000008011-8984.709ENSCSEG00000007992-9784.864
ENSCSEG00000008011-10087.013ENSCSEG00000000544eef1a1b9887.832
ENSCSEG00000008011-10090.693ENSCSEG00000008004-9791.518
ENSCSEG00000008011-9638.288ENSCSEG00000019708GSPT17538.375
ENSCSEG00000008011-9441.876ENSCSEG00000002794hbs1l6341.876
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000008011-9892.018ENSAPOG00000004714-9892.018Acanthochromis_polyacanthus
ENSCSEG00000008011-9093.220ENSACIG00000001219-9793.548Amphilophus_citrinellus
ENSCSEG00000008011-8794.541ENSAOCG00000022002-9894.541Amphiprion_ocellaris
ENSCSEG00000008011-10090.672ENSAOCG00000022039-9891.131Amphiprion_ocellaris
ENSCSEG00000008011-10091.323ENSAPEG00000016361-9891.796Amphiprion_percula
ENSCSEG00000008011-9894.235ENSATEG00000003244-9594.235Anabas_testudineus
ENSCSEG00000008011-10093.709ENSACLG00000022560-9894.013Astatotilapia_calliptera
ENSCSEG00000008011-10082.900WBGene00001168eef-1A.19883.407Caenorhabditis_elegans
ENSCSEG00000008011-10082.900WBGene00001169eef-1A.29883.407Caenorhabditis_elegans
ENSCSEG00000008011-9984.934ENSCING00000021478-9885.523Ciona_intestinalis
ENSCSEG00000008011-9879.560ENSCING00000005126-9879.560Ciona_intestinalis
ENSCSEG00000008011-10078.326ENSCING00000007703-9778.509Ciona_intestinalis
ENSCSEG00000008011-9880.176ENSCING00000018894-9780.176Ciona_intestinalis
ENSCSEG00000008011-9881.319ENSCSAVG00000009663-9881.319Ciona_savignyi
ENSCSEG00000008011-9975.054ENSCSAVG00000001085-8976.457Ciona_savignyi
ENSCSEG00000008011-9879.956ENSCSAVG00000003196-9879.956Ciona_savignyi
ENSCSEG00000008011-9984.061ENSCSAVG00000006357-9693.333Ciona_savignyi
ENSCSEG00000008011-9894.678ENSCVAG00000019356-9894.678Cyprinodon_variegatus
ENSCSEG00000008011-9885.398FBgn0000557eEF1alpha29885.398Drosophila_melanogaster
ENSCSEG00000008011-10085.065FBgn0284245eEF1alpha19785.491Drosophila_melanogaster
ENSCSEG00000008011-9982.174ENSEBUG00000015814-9882.705Eptatretus_burgeri
ENSCSEG00000008011-9894.678ENSFHEG00000015054-9894.678Fundulus_heteroclitus
ENSCSEG00000008011-9895.565ENSGAFG00000014646-9895.565Gambusia_affinis
ENSCSEG00000008011-9894.678ENSGACG00000002182-9894.678Gasterosteus_aculeatus
ENSCSEG00000008011-10092.625ENSGACG00000002143-9893.126Gasterosteus_aculeatus
ENSCSEG00000008011-5591.304ENSHBUG00000017166-9191.770Haplochromis_burtoni
ENSCSEG00000008011-9985.033ENSHCOG00000008489-9785.491Hippocampus_comes
ENSCSEG00000008011-9893.570ENSHCOG00000008468-9893.570Hippocampus_comes
ENSCSEG00000008011-9893.792ENSLBEG00000002759-9893.792Labrus_bergylta
ENSCSEG00000008011-9984.348ENSLBEG00000002955-9884.479Labrus_bergylta
ENSCSEG00000008011-9894.900ENSMAMG00000007715-9894.900Mastacembelus_armatus
ENSCSEG00000008011-9892.905ENSMMOG00000001165-10095.455Mola_mola
ENSCSEG00000008011-10075.922ENSMMOG00000018160-9588.043Mola_mola
ENSCSEG00000008011-9986.087ENSMMOG00000001106-9886.475Mola_mola
ENSCSEG00000008011-10082.251ENSNBRG00000017346-9782.301Neolamprologus_brichardi
ENSCSEG00000008011-7690.341ENSONIG00000017760-9890.341Oreochromis_niloticus
ENSCSEG00000008011-9895.565ENSORLG00000007614eef1a9895.565Oryzias_latipes
ENSCSEG00000008011-10093.737ENSORLG00015002397-9895.344Oryzias_latipes_hsok
ENSCSEG00000008011-9895.344ENSOMEG00000018226-9895.344Oryzias_melastigma
ENSCSEG00000008011-9892.920ENSPMGG00000023911-9498.837Periophthalmus_magnuspinnatus
ENSCSEG00000008011-9548.741ENSPMGG00000022427-9760.000Periophthalmus_magnuspinnatus
ENSCSEG00000008011-9895.344ENSPFOG00000003924-9895.037Poecilia_formosa
ENSCSEG00000008011-9895.344ENSPLAG00000004316-9895.344Poecilia_latipinna
ENSCSEG00000008011-9895.122ENSPMEG00000001010-9895.122Poecilia_mexicana
ENSCSEG00000008011-10093.074ENSPREG00000008243-9894.900Poecilia_reticulata
ENSCSEG00000008011-10093.709ENSPNYG00000007263-9894.013Pundamilia_nyererei
ENSCSEG00000008011-9780.899YBR118WTEF29880.266Saccharomyces_cerevisiae
ENSCSEG00000008011-9780.899YPR080WTEF19880.266Saccharomyces_cerevisiae
ENSCSEG00000008011-5393.033ENSSMAG00000016277-9693.033Scophthalmus_maximus
ENSCSEG00000008011-9883.298ENSSMAG00000018469-9883.298Scophthalmus_maximus
ENSCSEG00000008011-9894.457ENSSDUG00000008198-9894.457Seriola_dumerili
ENSCSEG00000008011-9892.239ENSSPAG00000001710-9892.239Stegastes_partitus
ENSCSEG00000008011-9985.870ENSTRUG00000005066-9886.253Takifugu_rubripes
ENSCSEG00000008011-9894.900ENSTRUG00000005727ef-1a9894.900Takifugu_rubripes
ENSCSEG00000008011-9894.900ENSTNIG00000002619-9894.900Tetraodon_nigroviridis
ENSCSEG00000008011-9981.522ENSTNIG00000002617-9483.111Tetraodon_nigroviridis
ENSCSEG00000008011-9895.344ENSXCOG00000001542-10097.674Xiphophorus_couchianus

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